RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 HSPA8P11142 646 aaKnown RBP22.98■■□□□ 1.27
HSPG2-210ENST00000481644 CDC42EP5Q6NZY7 148 aa22.98■■□□□ 1.27
HSPG2-210ENST00000481644 FAM83AQ86UY5 434 aa22.98■■□□□ 1.27
HSPG2-210ENST00000481644 CDAN1Q8IWY9 1227 aa22.98■■□□□ 1.27
HSPG2-210ENST00000481644 CCDC8Q9H0W5 538 aaPredicted RBP22.98■■□□□ 1.27
HSPG2-210ENST00000481644 TLR7Q9NYK1 1049 aaKnown RBP22.98■■□□□ 1.27
HSPG2-210ENST00000481644 CA12O43570 354 aa22.97■■□□□ 1.27
HSPG2-210ENST00000481644 IREB2P48200 963 aaKnown RBP22.97■■□□□ 1.27
HSPG2-210ENST00000481644 LBX1P52954 281 aa22.97■■□□□ 1.27
HSPG2-210ENST00000481644 TBC1D9Q6ZT07 1266 aa22.97■■□□□ 1.27
HSPG2-210ENST00000481644 RHPN1Q8TCX5 695 aa22.97■■□□□ 1.27
HSPG2-210ENST00000481644 USP40Q9NVE5 1235 aa22.97■■□□□ 1.27
HSPG2-210ENST00000481644 GAKO14976 1311 aa22.97■■□□□ 1.27
HSPG2-210ENST00000481644 OTOFQ9HC10 1997 aa22.96■■□□□ 1.27
HSPG2-210ENST00000481644 USP2O75604 605 aaPredicted RBP22.96■■□□□ 1.27
HSPG2-210ENST00000481644 MECOMQ03112 1051 aa22.96■■□□□ 1.27
HSPG2-210ENST00000481644 AACSQ86V21 672 aa22.96■■□□□ 1.27
HSPG2-210ENST00000481644 PRDM10Q9NQV6 1147 aa22.96■■□□□ 1.27
HSPG2-210ENST00000481644 SNRKQ9NRH2 765 aa22.96■■□□□ 1.27
HSPG2-210ENST00000481644 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.96■■□□□ 1.27
HSPG2-210ENST00000481644 MROH7-TTC4A0A0A0MT08 1334 aa22.95■■□□□ 1.26
HSPG2-210ENST00000481644 APBB1O00213 710 aa22.95■■□□□ 1.26
HSPG2-210ENST00000481644 RRP1P56182 461 aaKnown RBP22.95■■□□□ 1.26
HSPG2-210ENST00000481644 REM2Q8IYK8 340 aaPredicted RBP22.95■■□□□ 1.26
HSPG2-210ENST00000481644 KIF1BPQ96EK5 621 aa22.95■■□□□ 1.26
HSPG2-210ENST00000481644 ZNF512BQ96KM6 892 aaPredicted RBP22.95■■□□□ 1.26
HSPG2-210ENST00000481644 IL1RAPL2Q9NP60 686 aa22.95■■□□□ 1.26
HSPG2-210ENST00000481644 RAI14Q9P0K7 980 aa22.95■■□□□ 1.26
HSPG2-210ENST00000481644 AK9Q5TCS8 1911 aa22.94■■□□□ 1.26
HSPG2-210ENST00000481644 MAST2Q6P0Q8 1798 aa22.94■■□□□ 1.26
HSPG2-210ENST00000481644 RPAP1Q9BWH6 1393 aaPredicted RBP22.94■■□□□ 1.26
HSPG2-210ENST00000481644 UNCXA6NJT0 531 aa22.94■■□□□ 1.26
HSPG2-210ENST00000481644 MKRN3Q13064 507 aaKnown RBP22.94■■□□□ 1.26
HSPG2-210ENST00000481644 SLC10A4Q96EP9 437 aa22.94■■□□□ 1.26
HSPG2-210ENST00000481644 FAM163AQ96GL9 167 aaPredicted RBP22.94■■□□□ 1.26
HSPG2-210ENST00000481644 CLMNQ96JQ2 1002 aa22.94■■□□□ 1.26
HSPG2-210ENST00000481644 CSRNP1Q96S65 589 aa22.94■■□□□ 1.26
HSPG2-210ENST00000481644 LRP2BPQ9P2M1 347 aa22.94■■□□□ 1.26
HSPG2-210ENST00000481644 TSKSQ9UJT2 592 aa22.94■■□□□ 1.26
HSPG2-210ENST00000481644 GSTO1P78417 241 aa22.93■■□□□ 1.26
HSPG2-210ENST00000481644 TCP10Q12799 353 aa22.93■■□□□ 1.26
HSPG2-210ENST00000481644 NFIAQ12857 509 aa22.93■■□□□ 1.26
HSPG2-210ENST00000481644 ANKRD13AQ8IZ07 590 aa22.93■■□□□ 1.26
HSPG2-210ENST00000481644 FAM151AQ8WW52 585 aa22.93■■□□□ 1.26
HSPG2-210ENST00000481644 NSUN4Q96CB9 384 aaKnown RBP22.93■■□□□ 1.26
HSPG2-210ENST00000481644 HOOK2Q96ED9 719 aa22.93■■□□□ 1.26
HSPG2-210ENST00000481644 RAB11FIP3O75154 756 aa22.92■■□□□ 1.26
HSPG2-210ENST00000481644 LDHCP07864 332 aa22.92■■□□□ 1.26
HSPG2-210ENST00000481644 BTDP43251 543 aa22.92■■□□□ 1.26
HSPG2-210ENST00000481644 CLASRPQ8N2M8 674 aaKnown RBP22.92■■□□□ 1.26
HSPG2-210ENST00000481644 ZNF384Q8TF68 577 aa22.92■■□□□ 1.26
HSPG2-210ENST00000481644 MYO5AQ9Y4I1 1855 aaKnown RBP22.92■■□□□ 1.26
HSPG2-210ENST00000481644 CYP2E1P05181 493 aaPredicted RBP22.91■■□□□ 1.26
HSPG2-210ENST00000481644 ZAP70P43403 619 aa22.91■■□□□ 1.26
HSPG2-210ENST00000481644 SPRYD7Q5W111 196 aa22.91■■□□□ 1.26
HSPG2-210ENST00000481644 FAM198AQ9UFP1 575 aa22.91■■□□□ 1.26
HSPG2-210ENST00000481644 GPR75-ASB3A0A0A6YYF3 556 aa22.9■■□□□ 1.26
HSPG2-210ENST00000481644 WNK4Q96J92 1243 aa22.9■■□□□ 1.26
HSPG2-210ENST00000481644 BCL11AQ9H165 835 aa22.9■■□□□ 1.26
HSPG2-210ENST00000481644 SAGE1Q9NXZ1 904 aa22.9■■□□□ 1.26
HSPG2-210ENST00000481644 DCAF15Q66K64 600 aa22.89■■□□□ 1.25
HSPG2-210ENST00000481644 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.89■■□□□ 1.252e-10■■■□□ 18.3
HSPG2-210ENST00000481644 IDI2Q9BXS1 227 aa22.89■■□□□ 1.25
HSPG2-210ENST00000481644 RNF186Q9NXI6 227 aa22.89■■□□□ 1.25
HSPG2-210ENST00000481644 DOCK2Q92608 1830 aa22.89■■□□□ 1.25
HSPG2-210ENST00000481644 LAMB1P07942 1786 aa22.89■■□□□ 1.25
HSPG2-210ENST00000481644 RFX7Q2KHR2 1363 aa22.89■■□□□ 1.25
HSPG2-210ENST00000481644 TRPA1O75762 1119 aa22.88■■□□□ 1.25
HSPG2-210ENST00000481644 IFIT2P09913 472 aaKnown RBP22.88■■□□□ 1.25
HSPG2-210ENST00000481644 ZBTB48P10074 688 aaPredicted RBP22.88■■□□□ 1.25
HSPG2-210ENST00000481644 RGS3P49796 1198 aa22.88■■□□□ 1.25
HSPG2-210ENST00000481644 MAP3K9P80192 1104 aa22.88■■□□□ 1.25
HSPG2-210ENST00000481644 SREBF2Q12772 1141 aa22.88■■□□□ 1.25
HSPG2-210ENST00000481644 NAA16Q6N069 864 aaPredicted RBP22.88■■□□□ 1.25
HSPG2-210ENST00000481644 TNS4Q8IZW8 715 aa22.88■■□□□ 1.25
HSPG2-210ENST00000481644 ELP3Q9H9T3 547 aa22.88■■□□□ 1.25
HSPG2-210ENST00000481644 CSADQ9Y600 493 aa22.88■■□□□ 1.25
HSPG2-210ENST00000481644 ENTPD3O75355 529 aa22.87■■□□□ 1.25
HSPG2-210ENST00000481644 VGLL4Q14135 290 aa22.87■■□□□ 1.25
HSPG2-210ENST00000481644 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.87■■□□□ 1.25
HSPG2-210ENST00000481644 WRNIP1Q96S55 665 aa22.87■■□□□ 1.25
HSPG2-210ENST00000481644 NOL10Q9BSC4 688 aaKnown RBP22.87■■□□□ 1.25
HSPG2-210ENST00000481644 PIH1D3Q9NQM4 214 aaKnown RBP22.87■■□□□ 1.25
HSPG2-210ENST00000481644 WDHD1O75717 1129 aaPredicted RBP22.86■■□□□ 1.25
HSPG2-210ENST00000481644 TM4SF4P48230 202 aa22.86■■□□□ 1.25
HSPG2-210ENST00000481644 RHBDL3P58872 404 aa22.86■■□□□ 1.25
HSPG2-210ENST00000481644 PICALMQ13492 652 aa22.86■■□□□ 1.25
HSPG2-210ENST00000481644 MIGA2Q7L4E1 593 aa22.86■■□□□ 1.25
HSPG2-210ENST00000481644 ZFPM1Q8IX07 1006 aa22.86■■□□□ 1.25
HSPG2-210ENST00000481644 ZNF341Q9BYN7 854 aa22.86■■□□□ 1.25
HSPG2-210ENST00000481644 MANSC4A6NHS7 340 aaPredicted RBP22.85■■□□□ 1.25
HSPG2-210ENST00000481644 IGSF3O75054 1194 aa22.85■■□□□ 1.25
HSPG2-210ENST00000481644 MAP4K4O95819 1239 aaPredicted RBP22.85■■□□□ 1.25
HSPG2-210ENST00000481644 ZSCAN29Q8IWY8 852 aaPredicted RBP22.85■■□□□ 1.25
HSPG2-210ENST00000481644 OPTNQ96CV9 577 aa22.85■■□□□ 1.25
HSPG2-210ENST00000481644 LRRCC1Q9C099 1032 aa22.85■■□□□ 1.25
HSPG2-210ENST00000481644 DDX4Q9NQI0 724 aaKnown RBP22.85■■□□□ 1.25
HSPG2-210ENST00000481644 NDUFB9Q9Y6M9 179 aa22.85■■□□□ 1.25
HSPG2-210ENST00000481644 CASP8AP2Q9UKL3 1982 aa22.84■■□□□ 1.25
HSPG2-210ENST00000481644 IDH1O75874 414 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms