RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 PRDX5P30044 214 aa16.5■□□□□ 0.23
VCL-205ENST00000478896 PPIL2Q13356 520 aa16.5■□□□□ 0.23
VCL-205ENST00000478896 KIF22Q14807 665 aa16.5■□□□□ 0.23
VCL-205ENST00000478896 DIXDC1Q155Q3 683 aa16.5■□□□□ 0.23
VCL-205ENST00000478896 SLC9C1Q4G0N8 1177 aa16.5■□□□□ 0.23
VCL-205ENST00000478896 ATG9AQ7Z3C6 839 aa16.5■□□□□ 0.23
VCL-205ENST00000478896 ARMC5Q96C12 935 aa16.5■□□□□ 0.23
VCL-205ENST00000478896 FBXO3Q9UK99 471 aa16.5■□□□□ 0.23
VCL-205ENST00000478896 HDAC5Q9UQL6 1122 aa16.5■□□□□ 0.23
VCL-205ENST00000478896 DAGLAQ9Y4D2 1042 aa16.5■□□□□ 0.23
VCL-205ENST00000478896 ZSWIM8A7E2V4 1837 aa16.49■□□□□ 0.23
VCL-205ENST00000478896 BTBD19C9JJ37 291 aa16.49■□□□□ 0.23
VCL-205ENST00000478896 CIAO1O76071 339 aa16.49■□□□□ 0.23
VCL-205ENST00000478896 CAP1Q01518 475 aa16.49■□□□□ 0.23
VCL-205ENST00000478896 NBPF11Q86T75 865 aa16.49■□□□□ 0.23
VCL-205ENST00000478896 FAM151AQ8WW52 585 aa16.49■□□□□ 0.23
VCL-205ENST00000478896 TMEM106CQ9BVX2 250 aa16.49■□□□□ 0.23
VCL-205ENST00000478896 API5Q9BZZ5 524 aaKnown RBP16.49■□□□□ 0.23
VCL-205ENST00000478896 DENND2AQ9ULE3 1009 aa16.49■□□□□ 0.23
VCL-205ENST00000478896 NOB1Q9ULX3 412 aaKnown RBP16.49■□□□□ 0.23
VCL-205ENST00000478896 PTCH2Q9Y6C5 1203 aa16.49■□□□□ 0.23
VCL-205ENST00000478896 DOCK2Q92608 1830 aa16.49■□□□□ 0.23
VCL-205ENST00000478896 TLR2O60603 784 aa16.48■□□□□ 0.23
VCL-205ENST00000478896 CT47B1P0C2W7 299 aaPredicted RBP16.48■□□□□ 0.23
VCL-205ENST00000478896 PPATQ06203 517 aa16.48■□□□□ 0.23
VCL-205ENST00000478896 ZCCHC17Q9NP64 241 aaKnown RBP16.48■□□□□ 0.23
VCL-205ENST00000478896 LRRFIP2Q9Y608 721 aaKnown RBP16.48■□□□□ 0.23
VCL-205ENST00000478896 MYH2Q9UKX2 1941 aa16.48■□□□□ 0.23
VCL-205ENST00000478896 ECM2O94769 699 aaPredicted RBP16.47■□□□□ 0.23
VCL-205ENST00000478896 INPP5BP32019 993 aa16.47■□□□□ 0.23
VCL-205ENST00000478896 IL15P40933 162 aaPredicted RBP16.47■□□□□ 0.23
VCL-205ENST00000478896 PHKA1P46020 1223 aa16.47■□□□□ 0.23
VCL-205ENST00000478896 CDC42EP5Q6NZY7 148 aa16.47■□□□□ 0.23
VCL-205ENST00000478896 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.47■□□□□ 0.23
VCL-205ENST00000478896 PA2G4Q9UQ80 394 aaKnown RBP16.47■□□□□ 0.23
VCL-205ENST00000478896 SEMA3EO15041 775 aa16.46■□□□□ 0.23
VCL-205ENST00000478896 EN2P19622 333 aaPredicted RBP16.46■□□□□ 0.23
VCL-205ENST00000478896 LACTBP83111 547 aaPredicted RBP16.46■□□□□ 0.23
VCL-205ENST00000478896 NFIAQ12857 509 aa16.46■□□□□ 0.23
VCL-205ENST00000478896 SLC4A8Q2Y0W8 1093 aa16.46■□□□□ 0.23
VCL-205ENST00000478896 ZGPATQ8N5A5 531 aaKnown RBP16.46■□□□□ 0.23
VCL-205ENST00000478896 GCC1Q96CN9 775 aa16.46■□□□□ 0.23
VCL-205ENST00000478896 ZNF333Q96JL9 665 aa16.46■□□□□ 0.23
VCL-205ENST00000478896 USP40Q9NVE5 1235 aa16.46■□□□□ 0.23
VCL-205ENST00000478896 SALL1Q9NSC2 1324 aa16.45■□□□□ 0.22
VCL-205ENST00000478896 MYCP01106 439 aaPredicted RBP16.45■□□□□ 0.22
VCL-205ENST00000478896 DZIP1Q86YF9 867 aaKnown RBP16.45■□□□□ 0.22
VCL-205ENST00000478896 MEIS3Q99687 375 aa16.45■□□□□ 0.22
VCL-205ENST00000478896 ARHGAP39Q9C0H5 1083 aa16.45■□□□□ 0.22
VCL-205ENST00000478896 PCDH10Q9P2E7 1040 aa16.45■□□□□ 0.22
VCL-205ENST00000478896 KIAA0100Q14667 2235 aaKnown RBP16.44■□□□□ 0.22
VCL-205ENST00000478896 CCDC102BQ68D86 513 aa16.44■□□□□ 0.22
VCL-205ENST00000478896 TRMT2AQ8IZ69 625 aaKnown RBP16.44■□□□□ 0.22
VCL-205ENST00000478896 ABCF2Q9UG63 623 aa16.44■□□□□ 0.22
VCL-205ENST00000478896 CPA4Q9UI42 421 aa16.44■□□□□ 0.22
VCL-205ENST00000478896 PDHXO00330 501 aa16.43■□□□□ 0.22
VCL-205ENST00000478896 GNRH1P01148 92 aa16.43■□□□□ 0.22
VCL-205ENST00000478896 ADORA1P30542 326 aa16.43■□□□□ 0.22
VCL-205ENST00000478896 NOL9Q5SY16 702 aaKnown RBP16.43■□□□□ 0.22
VCL-205ENST00000478896 ANKRD23Q86SG2 305 aa16.43■□□□□ 0.22
VCL-205ENST00000478896 ZSCAN29Q8IWY8 852 aaPredicted RBP16.43■□□□□ 0.22
VCL-205ENST00000478896 COPRSQ9NQ92 184 aa16.43■□□□□ 0.22
VCL-205ENST00000478896 FAM198AQ9UFP1 575 aa16.43■□□□□ 0.22
VCL-205ENST00000478896 ZNF112Q9UJU3 913 aa16.43■□□□□ 0.22
VCL-205ENST00000478896 HTTP42858 3142 aa16.42■□□□□ 0.22
VCL-205ENST00000478896 SLF2Q8IX21 1173 aa16.42■□□□□ 0.22
VCL-205ENST00000478896 SH3TC2Q8TF17 1288 aa16.42■□□□□ 0.22
VCL-205ENST00000478896 KCNH4Q9UQ05 1017 aa16.42■□□□□ 0.22
VCL-205ENST00000478896 SRGAP3O43295 1099 aa16.41■□□□□ 0.22
VCL-205ENST00000478896 GNAI3P08754 354 aa16.41■□□□□ 0.22
VCL-205ENST00000478896 RGS3P49796 1198 aa16.41■□□□□ 0.22
VCL-205ENST00000478896 PRMT2P55345 433 aa16.41■□□□□ 0.22
VCL-205ENST00000478896 PICALMQ13492 652 aa16.41■□□□□ 0.22
VCL-205ENST00000478896 RASGRF1Q13972 1273 aa16.41■□□□□ 0.22
VCL-205ENST00000478896 PARK7Q99497 189 aaKnown RBP16.41■□□□□ 0.22
VCL-205ENST00000478896 PICK1Q9NRD5 415 aa16.41■□□□□ 0.22
VCL-205ENST00000478896 AKAP2Q9Y2D5 859 aa16.41■□□□□ 0.22
VCL-205ENST00000478896 DOCK1Q14185 1865 aa16.41■□□□□ 0.22
VCL-205ENST00000478896 A0A1B0GUL7 405 aa16.4■□□□□ 0.22
VCL-205ENST00000478896 ENTPD3O75355 529 aa16.4■□□□□ 0.22
VCL-205ENST00000478896 FMNL1O95466 1100 aaPredicted RBP16.4■□□□□ 0.22
VCL-205ENST00000478896 HOXD10P28358 340 aa16.4■□□□□ 0.22
VCL-205ENST00000478896 BTDP43251 543 aa16.4■□□□□ 0.22
VCL-205ENST00000478896 PSMC4P43686 418 aa16.4■□□□□ 0.22
VCL-205ENST00000478896 RARSP54136 660 aaKnown RBP16.4■□□□□ 0.22
VCL-205ENST00000478896 TIMM10P62072 90 aa16.4■□□□□ 0.22
VCL-205ENST00000478896 MVPQ14764 893 aaKnown RBP16.4■□□□□ 0.22
VCL-205ENST00000478896 SPTY2D1Q68D10 685 aaPredicted RBP16.4■□□□□ 0.22
VCL-205ENST00000478896 C17orf99Q6UX52 265 aa16.4■□□□□ 0.22
VCL-205ENST00000478896 ZFPM1Q8IX07 1006 aa16.4■□□□□ 0.22
VCL-205ENST00000478896 SCYL3Q8IZE3 742 aa16.4■□□□□ 0.22
VCL-205ENST00000478896 IDI2Q9BXS1 227 aa16.4■□□□□ 0.22
VCL-205ENST00000478896 CENPFP49454 3210 aa16.4■□□□□ 0.22
VCL-205ENST00000478896 GAKO14976 1311 aa16.4■□□□□ 0.22
VCL-205ENST00000478896 TFCP2Q12800 502 aa16.39■□□□□ 0.21
VCL-205ENST00000478896 ERICH6Q7L0X2 663 aa16.39■□□□□ 0.21
VCL-205ENST00000478896 RAET1EQ8TD07 263 aa16.39■□□□□ 0.21
VCL-205ENST00000478896 XAGE2Q96GT9 111 aa16.39■□□□□ 0.21
VCL-205ENST00000478896 NEUROD6Q96NK8 337 aa16.39■□□□□ 0.21
VCL-205ENST00000478896 PDS5AQ29RF7 1337 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms