RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 SYNGAP1Q96PV0 1343 aa5.09□□□□□ -1.59
CALD1-218ENST00000478075 PLP2Q04941 152 aa5.09□□□□□ -1.59
CALD1-218ENST00000478075 AKAP4Q5JQC9 854 aa5.09□□□□□ -1.59
CALD1-218ENST00000478075 TMEM102Q8N9M5 508 aaPredicted RBP5.09□□□□□ -1.59
CALD1-218ENST00000478075 PLAGL2Q9UPG8 496 aa5.09□□□□□ -1.59
CALD1-218ENST00000478075 GRIN3BO60391 1043 aa5.08□□□□□ -1.6
CALD1-218ENST00000478075 DKK1O94907 266 aa5.08□□□□□ -1.6
CALD1-218ENST00000478075 GSTM4Q03013 218 aa5.08□□□□□ -1.6
CALD1-218ENST00000478075 HGSNATQ68CP4 663 aa5.08□□□□□ -1.6
CALD1-218ENST00000478075 SP8Q8IXZ3 490 aa5.08□□□□□ -1.6
CALD1-218ENST00000478075 SLC16A11Q8NCK7 471 aa5.08□□□□□ -1.6
CALD1-218ENST00000478075 ALG2Q9H553 416 aa5.08□□□□□ -1.6
CALD1-218ENST00000478075 DZANK1Q9NVP4 752 aa5.08□□□□□ -1.6
CALD1-218ENST00000478075 ZC3H12DA2A288 527 aaKnown RBP5.07□□□□□ -1.6
CALD1-218ENST00000478075 OTOL1A6NHN0 477 aaPredicted RBP5.07□□□□□ -1.6
CALD1-218ENST00000478075 ITIH2P19823 946 aa5.07□□□□□ -1.6
CALD1-218ENST00000478075 ABHD4Q8TB40 342 aa5.07□□□□□ -1.6
CALD1-218ENST00000478075 GDPD2Q9HCC8 539 aa5.07□□□□□ -1.6
CALD1-218ENST00000478075 NFKBIEO00221 500 aa5.06□□□□□ -1.6
CALD1-218ENST00000478075 BRD2P25440 801 aaKnown RBP5.06□□□□□ -1.6
CALD1-218ENST00000478075 CLCN7P51798 805 aa5.06□□□□□ -1.6
CALD1-218ENST00000478075 DLG4P78352 724 aa5.06□□□□□ -1.6
CALD1-218ENST00000478075 HNRNPUQ00839 825 aaKnown RBP eCLIP5.06□□□□□ -1.6
CALD1-218ENST00000478075 PDE12Q6L8Q7 609 aaKnown RBP5.06□□□□□ -1.6
CALD1-218ENST00000478075 VN1R5Q7Z5H4 357 aa5.06□□□□□ -1.6
CALD1-218ENST00000478075 WWC1Q8IX03 1113 aa5.06□□□□□ -1.6
CALD1-218ENST00000478075 PIDD1Q9HB75 910 aa5.06□□□□□ -1.6
CALD1-218ENST00000478075 A6NJR5 290 aa5.05□□□□□ -1.6
CALD1-218ENST00000478075 TNFRSF1AP19438 455 aa5.05□□□□□ -1.6
CALD1-218ENST00000478075 RGS19P49795 217 aa5.05□□□□□ -1.6
CALD1-218ENST00000478075 CDK5R2Q13319 367 aa5.05□□□□□ -1.6
CALD1-218ENST00000478075 LGR6Q9HBX8 967 aa5.05□□□□□ -1.6
CALD1-218ENST00000478075 SEMA3GQ9NS98 782 aa5.05□□□□□ -1.6
CALD1-218ENST00000478075 GTF2IRD1Q9UHL9 959 aa5.05□□□□□ -1.6
CALD1-218ENST00000478075 SALL4Q9UJQ4 1053 aa5.05□□□□□ -1.6
CALD1-218ENST00000478075 PEX10O60683 326 aa5.04□□□□□ -1.6
CALD1-218ENST00000478075 ESRRAP11474 423 aaPredicted RBP5.04□□□□□ -1.6
CALD1-218ENST00000478075 DDX54Q8TDD1 881 aaKnown RBP5.04□□□□□ -1.6
CALD1-218ENST00000478075 PMEPA1Q969W9 287 aa5.04□□□□□ -1.6
CALD1-218ENST00000478075 LRFN2Q9ULH4 789 aa5.04□□□□□ -1.6
CALD1-218ENST00000478075 KCTD3Q9Y597 815 aa5.04□□□□□ -1.6
CALD1-218ENST00000478075 FSHBP01225 129 aa5.03□□□□□ -1.6
CALD1-218ENST00000478075 CYP2E1P05181 493 aaPredicted RBP5.03□□□□□ -1.6
CALD1-218ENST00000478075 ZNF827Q17R98 1081 aa5.03□□□□□ -1.6
CALD1-218ENST00000478075 NPAS4Q8IUM7 802 aa5.03□□□□□ -1.6
CALD1-218ENST00000478075 NRSN2Q9GZP1 204 aa5.03□□□□□ -1.6
CALD1-218ENST00000478075 IGF2BP3O00425 579 aaKnown RBP eCLIP5.02□□□□□ -1.61
CALD1-218ENST00000478075 ATP9BO43861 1147 aa5.02□□□□□ -1.61
CALD1-218ENST00000478075 MAOBP27338 520 aa5.02□□□□□ -1.61
CALD1-218ENST00000478075 GDF5P43026 501 aa5.02□□□□□ -1.61
CALD1-218ENST00000478075 POU4F3Q15319 338 aa5.02□□□□□ -1.61
CALD1-218ENST00000478075 HHIPL2Q6UWX4 724 aa5.02□□□□□ -1.61
CALD1-218ENST00000478075 FRMD5Q7Z6J6 570 aa5.02□□□□□ -1.61
CALD1-218ENST00000478075 NXPE3Q969Y0 559 aa5.02□□□□□ -1.61
CALD1-218ENST00000478075 DUSP23Q9BVJ7 150 aa5.02□□□□□ -1.61
CALD1-218ENST00000478075 ATXN3LQ9H3M9 355 aa5.02□□□□□ -1.61
CALD1-218ENST00000478075 C19orf73Q9NVV2 129 aa5.02□□□□□ -1.61
CALD1-218ENST00000478075 U3KQE9 123 aa5.02□□□□□ -1.61
CALD1-218ENST00000478075 RPLP1P05386 114 aaKnown RBP5.01□□□□□ -1.61
CALD1-218ENST00000478075 CES1P23141 567 aa5.01□□□□□ -1.61
CALD1-218ENST00000478075 IRF2BP1Q8IU81 584 aa5.01□□□□□ -1.61
CALD1-218ENST00000478075 CORO1BQ9BR76 489 aa5.01□□□□□ -1.61
CALD1-218ENST00000478075 KCNK12Q9HB15 430 aa5.01□□□□□ -1.61
CALD1-218ENST00000478075 TMEM132EQ6IEE7 984 aa5□□□□□ -1.61
CALD1-218ENST00000478075 LARP1Q6PKG0 1096 aaKnown RBP5□□□□□ -1.61
CALD1-218ENST00000478075 SPACA3Q8IXA5 215 aa5□□□□□ -1.61
CALD1-218ENST00000478075 BDH2Q9BUT1 245 aa5□□□□□ -1.61
CALD1-218ENST00000478075 MRIQ9BWK5 157 aa5□□□□□ -1.61
CALD1-218ENST00000478075 ELP3Q9H9T3 547 aa5□□□□□ -1.61
CALD1-218ENST00000478075 CARS2Q9HA77 564 aaKnown RBP5□□□□□ -1.61
CALD1-218ENST00000478075 KANSL3Q9P2N6 904 aa5□□□□□ -1.61
CALD1-218ENST00000478075 GNAT3A8MTJ3 354 aa4.99□□□□□ -1.61
CALD1-218ENST00000478075 WEE1P30291 646 aa4.99□□□□□ -1.61
CALD1-218ENST00000478075 ETFBKMTQ8IXQ9 262 aa4.99□□□□□ -1.61
CALD1-218ENST00000478075 SMYD4Q8IYR2 804 aaPredicted RBP4.99□□□□□ -1.61
CALD1-218ENST00000478075 TEX51A0A1B0GUA7 166 aa4.98□□□□□ -1.61
CALD1-218ENST00000478075 K7ESM1 405 aa4.98□□□□□ -1.61
CALD1-218ENST00000478075 CYR61O00622 381 aa4.98□□□□□ -1.61
CALD1-218ENST00000478075 COX20Q5RI15 118 aa4.98□□□□□ -1.61
CALD1-218ENST00000478075 MYLIPQ8WY64 445 aa4.98□□□□□ -1.61
CALD1-218ENST00000478075 MCOLN1Q9GZU1 580 aa4.98□□□□□ -1.61
CALD1-218ENST00000478075 AOC2O75106 756 aa4.97□□□□□ -1.61
CALD1-218ENST00000478075 CRB2Q5IJ48 1285 aa4.97□□□□□ -1.61
CALD1-218ENST00000478075 ZNF438Q7Z4V0 828 aa4.97□□□□□ -1.61
CALD1-218ENST00000478075 FEZF2Q8TBJ5 459 aa4.97□□□□□ -1.61
CALD1-218ENST00000478075 ALPK1Q96QP1 1244 aa4.97□□□□□ -1.61
CALD1-218ENST00000478075 OSMRQ99650 979 aa4.97□□□□□ -1.61
CALD1-218ENST00000478075 BHLHE41Q9C0J9 482 aaPredicted RBP4.97□□□□□ -1.61
CALD1-218ENST00000478075 SLC6A17Q9H1V8 727 aa4.97□□□□□ -1.61
CALD1-218ENST00000478075 LUC7LQ9NQ29 371 aaKnown RBP4.97□□□□□ -1.61
CALD1-218ENST00000478075 PCOLCE2Q9UKZ9 415 aa4.97□□□□□ -1.61
CALD1-218ENST00000478075 MATN3O15232 486 aa4.96□□□□□ -1.62
CALD1-218ENST00000478075 LEFTY1O75610 366 aa4.96□□□□□ -1.62
CALD1-218ENST00000478075 AFF3P51826 1226 aaKnown RBP4.96□□□□□ -1.62
CALD1-218ENST00000478075 ZDHHC14Q8IZN3 488 aa4.96□□□□□ -1.62
CALD1-218ENST00000478075 SLFN14P0C7P3 912 aa4.95□□□□□ -1.62
CALD1-218ENST00000478075 EDN3P14138 238 aa4.95□□□□□ -1.62
CALD1-218ENST00000478075 ASAP3Q8TDY4 903 aa4.95□□□□□ -1.62
CALD1-218ENST00000478075 HHIPQ96QV1 700 aa4.95□□□□□ -1.62
CALD1-218ENST00000478075 ACPPP15309 386 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms