RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ARHGEF10O15013 1369 aa6.16□□□□□ -1.42
SF3B6-202ENST00000478050 SSH2Q76I76 1423 aa6.16□□□□□ -1.42
SF3B6-202ENST00000478050 A0A1W2PNR3 127 aa6.15□□□□□ -1.42
SF3B6-202ENST00000478050 FBLN1P23142 703 aa6.15□□□□□ -1.42
SF3B6-202ENST00000478050 USP4Q13107 963 aa6.15□□□□□ -1.42
SF3B6-202ENST00000478050 RRS1Q15050 365 aaKnown RBP6.15□□□□□ -1.42
SF3B6-202ENST00000478050 TWISTNBQ3B726 338 aaPredicted RBP6.15□□□□□ -1.42
SF3B6-202ENST00000478050 PRSS36Q5K4E3 855 aa6.15□□□□□ -1.42
SF3B6-202ENST00000478050 LCE1DQ5T752 114 aa6.15□□□□□ -1.42
SF3B6-202ENST00000478050 ZNF468Q5VIY5 522 aaPredicted RBP6.15□□□□□ -1.42
SF3B6-202ENST00000478050 CHD1LQ86WJ1 897 aa6.15□□□□□ -1.42
SF3B6-202ENST00000478050 BANK1Q8NDB2 785 aa6.15□□□□□ -1.42
SF3B6-202ENST00000478050 CCDC85AQ96PX6 553 aaPredicted RBP6.15□□□□□ -1.42
SF3B6-202ENST00000478050 NACC1Q96RE7 527 aa6.15□□□□□ -1.42
SF3B6-202ENST00000478050 ETNK1Q9HBU6 452 aa6.15□□□□□ -1.42
SF3B6-202ENST00000478050 CEP126Q9P2H0 1117 aa6.15□□□□□ -1.42
SF3B6-202ENST00000478050 WWC3Q9ULE0 1092 aa6.15□□□□□ -1.42
SF3B6-202ENST00000478050 ACEP12821 1306 aa6.15□□□□□ -1.43
SF3B6-202ENST00000478050 KIAA0232Q92628 1395 aa6.15□□□□□ -1.43
SF3B6-202ENST00000478050 ANKARQ7Z5J8 1434 aa6.15□□□□□ -1.43
SF3B6-202ENST00000478050 PTPRUQ92729 1446 aa6.15□□□□□ -1.43
SF3B6-202ENST00000478050 FAM208AQ9UK61 1670 aaKnown RBP6.14□□□□□ -1.43
SF3B6-202ENST00000478050 CHD2O14647 1828 aaKnown RBP6.14□□□□□ -1.43
SF3B6-202ENST00000478050 ZBTB7BO15156 539 aaPredicted RBP6.14□□□□□ -1.43
SF3B6-202ENST00000478050 TRIM28Q13263 835 aaKnown RBP6.14□□□□□ -1.43
SF3B6-202ENST00000478050 EIF4A2Q14240 407 aaKnown RBP6.14□□□□□ -1.43
SF3B6-202ENST00000478050 THUMPD2Q9BTF0 503 aaKnown RBP6.14□□□□□ -1.43
SF3B6-202ENST00000478050 C22orf23Q9BZE7 217 aa6.14□□□□□ -1.43
SF3B6-202ENST00000478050 TBX22Q9Y458 520 aa6.14□□□□□ -1.43
SF3B6-202ENST00000478050 SBNO1A3KN83 1393 aa6.14□□□□□ -1.43
SF3B6-202ENST00000478050 LTN1O94822 1766 aa6.13□□□□□ -1.43
SF3B6-202ENST00000478050 ELOA3CA0A087WX78 387 aaPredicted RBP6.13□□□□□ -1.43
SF3B6-202ENST00000478050 ELOA3DA6NLF2 546 aaPredicted RBP6.13□□□□□ -1.43
SF3B6-202ENST00000478050 STAU1O95793 577 aaKnown RBP6.13□□□□□ -1.43
SF3B6-202ENST00000478050 TATP17735 454 aaPredicted RBP6.13□□□□□ -1.43
SF3B6-202ENST00000478050 ATP4AP20648 1035 aa6.13□□□□□ -1.43
SF3B6-202ENST00000478050 MFAP1P55081 439 aaKnown RBP6.13□□□□□ -1.43
SF3B6-202ENST00000478050 EZH2Q15910 746 aaKnown RBP6.13□□□□□ -1.43
SF3B6-202ENST00000478050 ELOA3BQ3SY89 546 aa6.13□□□□□ -1.43
SF3B6-202ENST00000478050 BMP2KLQ5H9B9 411 aa6.13□□□□□ -1.43
SF3B6-202ENST00000478050 SULT6B1Q6IMI4 303 aa6.13□□□□□ -1.43
SF3B6-202ENST00000478050 TSPYL6Q8N831 410 aa6.13□□□□□ -1.43
SF3B6-202ENST00000478050 C8orf58Q8NAV2 365 aa6.13□□□□□ -1.43
SF3B6-202ENST00000478050 ELOA3Q8NG57 546 aa6.13□□□□□ -1.43
SF3B6-202ENST00000478050 GDPD2Q9HCC8 539 aa6.13□□□□□ -1.43
SF3B6-202ENST00000478050 MARK1Q9P0L2 795 aa6.13□□□□□ -1.43
SF3B6-202ENST00000478050 DOLKQ9UPQ8 538 aa6.13□□□□□ -1.43
SF3B6-202ENST00000478050 FLT4P35916 1363 aa6.13□□□□□ -1.43
SF3B6-202ENST00000478050 DISP2A7MBM2 1401 aa6.12□□□□□ -1.43
SF3B6-202ENST00000478050 FAM229AH3BQW9 127 aa6.12□□□□□ -1.43
SF3B6-202ENST00000478050 CHL1O00533 1208 aa6.12□□□□□ -1.43
SF3B6-202ENST00000478050 FRAT2O75474 233 aaPredicted RBP6.12□□□□□ -1.43
SF3B6-202ENST00000478050 PTPRCP08575 1304 aa6.12□□□□□ -1.43
SF3B6-202ENST00000478050 KDRP35968 1356 aa6.12□□□□□ -1.43
SF3B6-202ENST00000478050 ABL2P42684 1182 aa6.12□□□□□ -1.43
SF3B6-202ENST00000478050 RBM25P49756 843 aaKnown RBP6.12□□□□□ -1.43
SF3B6-202ENST00000478050 LRP8Q14114 963 aa6.12□□□□□ -1.43
SF3B6-202ENST00000478050 ANKRD45Q5TZF3 282 aa6.12□□□□□ -1.43
SF3B6-202ENST00000478050 INTS3Q68E01 1043 aaKnown RBP6.12□□□□□ -1.43
SF3B6-202ENST00000478050 UNC5CLQ8IV45 518 aa6.12□□□□□ -1.43
SF3B6-202ENST00000478050 HSCBQ8IWL3 235 aa6.12□□□□□ -1.43
SF3B6-202ENST00000478050 MTMR14Q8NCE2 650 aa6.12□□□□□ -1.43
SF3B6-202ENST00000478050 TUBGCP6Q96RT7 1819 aa6.12□□□□□ -1.43
SF3B6-202ENST00000478050 LNPKQ9C0E8 428 aa6.12□□□□□ -1.43
SF3B6-202ENST00000478050 ANTXR1Q9H6X2 564 aa6.12□□□□□ -1.43
SF3B6-202ENST00000478050 CCDC9Q9Y3X0 531 aaKnown RBP6.12□□□□□ -1.43
SF3B6-202ENST00000478050 CRB1P82279 1406 aa6.11□□□□□ -1.43
SF3B6-202ENST00000478050 ELL2O00472 640 aaPredicted RBP6.11□□□□□ -1.43
SF3B6-202ENST00000478050 HTATSF1O43719 755 aaKnown RBP6.11□□□□□ -1.43
SF3B6-202ENST00000478050 FAM157BP0CG42 384 aa6.11□□□□□ -1.43
SF3B6-202ENST00000478050 GPR162Q16538 588 aa6.11□□□□□ -1.43
SF3B6-202ENST00000478050 AEBP1Q8IUX7 1158 aa6.11□□□□□ -1.43
SF3B6-202ENST00000478050 GAS2L2Q8NHY3 880 aa6.11□□□□□ -1.43
SF3B6-202ENST00000478050 SNX21Q969T3 373 aa6.11□□□□□ -1.43
SF3B6-202ENST00000478050 SLKQ9H2G2 1235 aaPredicted RBP6.11□□□□□ -1.43
SF3B6-202ENST00000478050 CHMP5Q9NZZ3 219 aa6.11□□□□□ -1.43
SF3B6-202ENST00000478050 AMOTL2Q9Y2J4 779 aa6.11□□□□□ -1.43
SF3B6-202ENST00000478050 AK9Q5TCS8 1911 aa6.11□□□□□ -1.43
SF3B6-202ENST00000478050 BRWD3Q6RI45 1802 aa6.11□□□□□ -1.43
SF3B6-202ENST00000478050 PHRF1Q9P1Y6 1649 aaKnown RBP6.1□□□□□ -1.43
SF3B6-202ENST00000478050 ATP10DQ9P241 1426 aa6.1□□□□□ -1.43
SF3B6-202ENST00000478050 RTL1A6NKG5 1358 aa6.1□□□□□ -1.43
SF3B6-202ENST00000478050 SOS1Q07889 1333 aaPredicted RBP6.1□□□□□ -1.43
SF3B6-202ENST00000478050 MAP3K19Q56UN5 1328 aa6.1□□□□□ -1.43
SF3B6-202ENST00000478050 IGSF1Q8N6C5 1336 aa6.1□□□□□ -1.43
SF3B6-202ENST00000478050 M0R082 166 aa6.1□□□□□ -1.43
SF3B6-202ENST00000478050 CDC45O75419 566 aa6.1□□□□□ -1.43
SF3B6-202ENST00000478050 DCTN1Q14203 1278 aa6.1□□□□□ -1.43
SF3B6-202ENST00000478050 HSP90AB2PQ58FF8 381 aa6.1□□□□□ -1.43
SF3B6-202ENST00000478050 OXLD1Q5BKU9 147 aa6.1□□□□□ -1.43
SF3B6-202ENST00000478050 BICDL1Q6ZP65 573 aa6.1□□□□□ -1.43
SF3B6-202ENST00000478050 SYT9Q86SS6 491 aa6.1□□□□□ -1.43
SF3B6-202ENST00000478050 RPAP2Q8IXW5 612 aaPredicted RBP6.1□□□□□ -1.43
SF3B6-202ENST00000478050 ANKRD44Q8N8A2 993 aa6.1□□□□□ -1.43
SF3B6-202ENST00000478050 NGDNQ8NEJ9 315 aaKnown RBP6.1□□□□□ -1.43
SF3B6-202ENST00000478050 ZNF417Q8TAU3 575 aa6.1□□□□□ -1.43
SF3B6-202ENST00000478050 RTF1Q92541 710 aaKnown RBP6.1□□□□□ -1.43
SF3B6-202ENST00000478050 CALR3Q96L12 384 aaKnown RBP6.1□□□□□ -1.43
SF3B6-202ENST00000478050 ZNF587Q96SQ5 575 aaPredicted RBP6.1□□□□□ -1.43
SF3B6-202ENST00000478050 DCTPP1Q9H773 170 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms