RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 EXOSC9Q06265 439 aaKnown RBP12.42□□□□□ -0.42
COL4A5-204ENST00000477429 CHAF1AQ13111 956 aaPredicted RBP12.42□□□□□ -0.42
COL4A5-204ENST00000477429 LRRC24Q50LG9 513 aa12.42□□□□□ -0.42
COL4A5-204ENST00000477429 APOBEC3HQ6NTF7 200 aaKnown RBP12.42□□□□□ -0.42
COL4A5-204ENST00000477429 GPR153Q6NV75 609 aa12.42□□□□□ -0.42
COL4A5-204ENST00000477429 FBXO33Q7Z6M2 555 aa12.42□□□□□ -0.42
COL4A5-204ENST00000477429 NBPF11Q86T75 865 aa12.42□□□□□ -0.42
COL4A5-204ENST00000477429 DPF3Q92784 378 aa12.42□□□□□ -0.42
COL4A5-204ENST00000477429 WRNIP1Q96S55 665 aa12.42□□□□□ -0.42
COL4A5-204ENST00000477429 CNNM1Q9NRU3 951 aa12.42□□□□□ -0.42
COL4A5-204ENST00000477429 RIPOR2Q9Y4F9 1068 aa12.42□□□□□ -0.42
COL4A5-204ENST00000477429 GRM8O00222 908 aa12.41□□□□□ -0.42
COL4A5-204ENST00000477429 SLURP2P0DP57 97 aa12.41□□□□□ -0.42
COL4A5-204ENST00000477429 OSBPP22059 807 aa12.41□□□□□ -0.42
COL4A5-204ENST00000477429 TNFAIP1Q13829 316 aa12.41□□□□□ -0.42
COL4A5-204ENST00000477429 CCDC27Q2M243 656 aa12.41□□□□□ -0.42
COL4A5-204ENST00000477429 MIGA2Q7L4E1 593 aa12.41□□□□□ -0.42
COL4A5-204ENST00000477429 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.41□□□□□ -0.42
COL4A5-204ENST00000477429 NBPF7P0C2Y1 421 aaPredicted RBP12.4□□□□□ -0.42
COL4A5-204ENST00000477429 CETPP11597 493 aa12.4□□□□□ -0.42
COL4A5-204ENST00000477429 PSMC4P43686 418 aa12.4□□□□□ -0.42
COL4A5-204ENST00000477429 BCAMP50895 628 aa12.4□□□□□ -0.42
COL4A5-204ENST00000477429 UBE4AQ14139 1066 aa12.4□□□□□ -0.42
COL4A5-204ENST00000477429 CCDC57Q2TAC2 916 aa12.4□□□□□ -0.42
COL4A5-204ENST00000477429 ERO1BQ86YB8 467 aa12.4□□□□□ -0.42
COL4A5-204ENST00000477429 KLHDC4Q8TBB5 520 aa12.4□□□□□ -0.42
COL4A5-204ENST00000477429 SALL2Q9Y467 1007 aaPredicted RBP12.4□□□□□ -0.42
COL4A5-204ENST00000477429 CSADQ9Y600 493 aa12.4□□□□□ -0.42
COL4A5-204ENST00000477429 CCL5P13501 91 aa12.39□□□□□ -0.43
COL4A5-204ENST00000477429 PPIL2Q13356 520 aa12.39□□□□□ -0.43
COL4A5-204ENST00000477429 ZFPM1Q8IX07 1006 aa12.39□□□□□ -0.43
COL4A5-204ENST00000477429 ANKRD44Q8N8A2 993 aa12.39□□□□□ -0.43
COL4A5-204ENST00000477429 VGLL2Q8N8G2 317 aa12.39□□□□□ -0.43
COL4A5-204ENST00000477429 CHMP4AQ9BY43 222 aa12.39□□□□□ -0.43
COL4A5-204ENST00000477429 SRRDQ9UH36 339 aa12.39□□□□□ -0.43
COL4A5-204ENST00000477429 GABRQQ9UN88 632 aa12.39□□□□□ -0.43
COL4A5-204ENST00000477429 IL16Q14005 1332 aa12.38□□□□□ -0.43
COL4A5-204ENST00000477429 PDHXO00330 501 aa12.38□□□□□ -0.43
COL4A5-204ENST00000477429 CYP2C8P10632 490 aa12.38□□□□□ -0.43
COL4A5-204ENST00000477429 PRKCZQ05513 592 aa12.38□□□□□ -0.43
COL4A5-204ENST00000477429 NFIAQ12857 509 aa12.38□□□□□ -0.43
COL4A5-204ENST00000477429 SNAPC2Q13487 334 aa12.38□□□□□ -0.43
COL4A5-204ENST00000477429 TAF7LQ5H9L4 462 aa12.38□□□□□ -0.43
COL4A5-204ENST00000477429 GPAT2Q6NUI2 795 aa12.38□□□□□ -0.43
COL4A5-204ENST00000477429 ZDHHC15Q96MV8 337 aa12.38□□□□□ -0.43
COL4A5-204ENST00000477429 RPTORQ8N122 1335 aa12.37□□□□□ -0.43
COL4A5-204ENST00000477429 BDP1A6H8Y1 2624 aa12.37□□□□□ -0.43
COL4A5-204ENST00000477429 ZBTB7BO15156 539 aaPredicted RBP12.37□□□□□ -0.43
COL4A5-204ENST00000477429 GRK4P32298 578 aa12.37□□□□□ -0.43
COL4A5-204ENST00000477429 GJA8P48165 433 aa12.37□□□□□ -0.43
COL4A5-204ENST00000477429 TNNI2P48788 182 aa12.37□□□□□ -0.43
COL4A5-204ENST00000477429 GUCD1Q96NT3 240 aa12.37□□□□□ -0.43
COL4A5-204ENST00000477429 UNC93B1Q9H1C4 597 aa12.37□□□□□ -0.43
COL4A5-204ENST00000477429 BICC1Q9H694 974 aaKnown RBP12.37□□□□□ -0.43
COL4A5-204ENST00000477429 STAP2Q9UGK3 403 aa12.37□□□□□ -0.43
COL4A5-204ENST00000477429 ZNF112Q9UJU3 913 aa12.37□□□□□ -0.43
COL4A5-204ENST00000477429 TNFRSF10AO00220 468 aa12.36□□□□□ -0.43
COL4A5-204ENST00000477429 GJB1P08034 283 aa12.36□□□□□ -0.43
COL4A5-204ENST00000477429 BCRP11274 1271 aa12.36□□□□□ -0.43
COL4A5-204ENST00000477429 HDLBPQ00341 1268 aaKnown RBP12.36□□□□□ -0.43
COL4A5-204ENST00000477429 TCP10Q12799 353 aa12.36□□□□□ -0.43
COL4A5-204ENST00000477429 KIF22Q14807 665 aa12.36□□□□□ -0.43
COL4A5-204ENST00000477429 ARHGEF6Q15052 776 aa12.36□□□□□ -0.43
COL4A5-204ENST00000477429 DIXDC1Q155Q3 683 aa12.36□□□□□ -0.43
COL4A5-204ENST00000477429 ANKRD23Q86SG2 305 aa12.36□□□□□ -0.43
COL4A5-204ENST00000477429 FAM83AQ86UY5 434 aa12.36□□□□□ -0.43
COL4A5-204ENST00000477429 TEKT1Q969V4 418 aa12.36□□□□□ -0.43
COL4A5-204ENST00000477429 ZCCHC17Q9NP64 241 aaKnown RBP12.36□□□□□ -0.43
COL4A5-204ENST00000477429 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.36□□□□□ -0.43
COL4A5-204ENST00000477429 KCNH4Q9UQ05 1017 aa12.36□□□□□ -0.43
COL4A5-204ENST00000477429 MYPNQ86TC9 1320 aa12.36□□□□□ -0.43
COL4A5-204ENST00000477429 ATRNL1Q5VV63 1379 aa12.35□□□□□ -0.43
COL4A5-204ENST00000477429 FMNL1O95466 1100 aaPredicted RBP12.35□□□□□ -0.43
COL4A5-204ENST00000477429 ELNP15502 786 aa12.35□□□□□ -0.43
COL4A5-204ENST00000477429 FGFR2P21802 821 aa12.35□□□□□ -0.43
COL4A5-204ENST00000477429 PPATQ06203 517 aa12.35□□□□□ -0.43
COL4A5-204ENST00000477429 SLC4A10Q6U841 1118 aa12.35□□□□□ -0.43
COL4A5-204ENST00000477429 U2AF1L4Q8WU68 220 aaKnown RBP12.35□□□□□ -0.43
COL4A5-204ENST00000477429 RNF208Q9H0X6 261 aa12.35□□□□□ -0.43
COL4A5-204ENST00000477429 C9orf78Q9NZ63 289 aaPredicted RBP12.35□□□□□ -0.43
COL4A5-204ENST00000477429 FAM198AQ9UFP1 575 aa12.35□□□□□ -0.43
COL4A5-204ENST00000477429 FBXO3Q9UK99 471 aa12.35□□□□□ -0.43
COL4A5-204ENST00000477429 GNRH1P01148 92 aa12.34□□□□□ -0.43
COL4A5-204ENST00000477429 RABL6Q3YEC7 729 aaPredicted RBP12.34□□□□□ -0.43
COL4A5-204ENST00000477429 METTL24Q5JXM2 366 aa12.34□□□□□ -0.43
COL4A5-204ENST00000477429 CDC42EP5Q6NZY7 148 aa12.34□□□□□ -0.43
COL4A5-204ENST00000477429 CCDC84Q86UT8 332 aaPredicted RBP12.34□□□□□ -0.43
COL4A5-204ENST00000477429 RAET1EQ8TD07 263 aa12.34□□□□□ -0.43
COL4A5-204ENST00000477429 ZNF341Q9BYN7 854 aa12.34□□□□□ -0.43
COL4A5-204ENST00000477429 DAGLAQ9Y4D2 1042 aa12.34□□□□□ -0.43
COL4A5-204ENST00000477429 UTYO14607 1347 aa12.34□□□□□ -0.43
COL4A5-204ENST00000477429 MROH5Q6ZUA9 1318 aa12.34□□□□□ -0.43
COL4A5-204ENST00000477429 RPAP1Q9BWH6 1393 aaPredicted RBP12.33□□□□□ -0.44
COL4A5-204ENST00000477429 ALDH1L1O75891 902 aa12.33□□□□□ -0.44
COL4A5-204ENST00000477429 PDE8BO95263 885 aa12.33□□□□□ -0.44
COL4A5-204ENST00000477429 PRDX5P30044 214 aa12.33□□□□□ -0.44
COL4A5-204ENST00000477429 PRMT2P55345 433 aa12.33□□□□□ -0.44
COL4A5-204ENST00000477429 PLCB2Q00722 1185 aa12.33□□□□□ -0.44
COL4A5-204ENST00000477429 FKBP1CQ5VVH2 108 aa12.33□□□□□ -0.44
COL4A5-204ENST00000477429 SH3BP5LQ7L8J4 393 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms