RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 GJA5P36382 358 aa25.64■■□□□ 1.7
EPHB3-202ENST00000473079 SPTY2D1Q68D10 685 aaPredicted RBP25.64■■□□□ 1.7
EPHB3-202ENST00000473079 IFNL1Q8IU54 200 aa25.64■■□□□ 1.7
EPHB3-202ENST00000473079 ITPRIPQ8IWB1 547 aa25.64■■□□□ 1.7
EPHB3-202ENST00000473079 GPR108Q9NPR9 543 aa25.64■■□□□ 1.7
EPHB3-202ENST00000473079 TESPA1A2RU30 521 aaPredicted RBP25.63■■□□□ 1.69
EPHB3-202ENST00000473079 GPR25O00155 361 aa25.63■■□□□ 1.69
EPHB3-202ENST00000473079 FAM163AQ96GL9 167 aaPredicted RBP25.63■■□□□ 1.69
EPHB3-202ENST00000473079 ELP3Q9H9T3 547 aa25.63■■□□□ 1.69
EPHB3-202ENST00000473079 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.63■■□□□ 1.69
EPHB3-202ENST00000473079 LAMB1P07942 1786 aa25.62■■□□□ 1.69
EPHB3-202ENST00000473079 VGLL4Q14135 290 aa25.62■■□□□ 1.69
EPHB3-202ENST00000473079 CTU1Q7Z7A3 348 aaKnown RBP25.62■■□□□ 1.69
EPHB3-202ENST00000473079 SLF2Q8IX21 1173 aa25.62■■□□□ 1.69
EPHB3-202ENST00000473079 ZNF296Q8WUU4 475 aaPredicted RBP25.62■■□□□ 1.69
EPHB3-202ENST00000473079 OPTNQ96CV9 577 aa25.62■■□□□ 1.69
EPHB3-202ENST00000473079 CSADQ9Y600 493 aa25.62■■□□□ 1.69
EPHB3-202ENST00000473079 GAKO14976 1311 aa25.62■■□□□ 1.69
EPHB3-202ENST00000473079 GORABQ5T7V8 394 aa25.61■■□□□ 1.69
EPHB3-202ENST00000473079 DCAF15Q66K64 600 aa25.61■■□□□ 1.69
EPHB3-202ENST00000473079 USP40Q9NVE5 1235 aa25.61■■□□□ 1.69
EPHB3-202ENST00000473079 ABCF2Q9UG63 623 aa25.61■■□□□ 1.69
EPHB3-202ENST00000473079 NOP58Q9Y2X3 529 aaKnown RBP25.61■■□□□ 1.69
EPHB3-202ENST00000473079 IGF2BP3O00425 579 aaKnown RBP eCLIP25.6■■□□□ 1.69
EPHB3-202ENST00000473079 ARID4AP29374 1257 aaPredicted RBP25.6■■□□□ 1.69
EPHB3-202ENST00000473079 OTUD7BQ6GQQ9 843 aa25.6■■□□□ 1.69
EPHB3-202ENST00000473079 HMG20BQ9P0W2 317 aa25.6■■□□□ 1.69
EPHB3-202ENST00000473079 CCDC85CA6NKD9 419 aa25.59■■□□□ 1.69
EPHB3-202ENST00000473079 MS4A1P11836 297 aa25.59■■□□□ 1.69
EPHB3-202ENST00000473079 NFIAQ12857 509 aa25.59■■□□□ 1.69
EPHB3-202ENST00000473079 DZIP1Q86YF9 867 aaKnown RBP25.59■■□□□ 1.69
EPHB3-202ENST00000473079 SPATA5Q8NB90 893 aa25.59■■□□□ 1.69
EPHB3-202ENST00000473079 MS4A4AQ96JQ5 239 aa25.59■■□□□ 1.69
EPHB3-202ENST00000473079 IDI2Q9BXS1 227 aa25.59■■□□□ 1.69
EPHB3-202ENST00000473079 R3HDMLQ9H3Y0 253 aa25.59■■□□□ 1.69
EPHB3-202ENST00000473079 C1orf115Q9H7X2 142 aa25.59■■□□□ 1.69
EPHB3-202ENST00000473079 FAM198AQ9UFP1 575 aa25.59■■□□□ 1.69
EPHB3-202ENST00000473079 SURF6O75683 361 aaKnown RBP25.58■■□□□ 1.69
EPHB3-202ENST00000473079 UQCRFS1P1P0C7P4 283 aa25.58■■□□□ 1.69
EPHB3-202ENST00000473079 ZNF341Q9BYN7 854 aa25.58■■□□□ 1.69
EPHB3-202ENST00000473079 OTOFQ9HC10 1997 aa25.58■■□□□ 1.69
EPHB3-202ENST00000473079 SPDYE5A6NIY4 337 aa25.57■■□□□ 1.68
EPHB3-202ENST00000473079 TCP10Q12799 353 aa25.57■■□□□ 1.68
EPHB3-202ENST00000473079 PKN2Q16513 984 aaKnown RBP25.57■■□□□ 1.68
EPHB3-202ENST00000473079 TNNI3KQ59H18 835 aa25.57■■□□□ 1.68
EPHB3-202ENST00000473079 ERICH6Q7L0X2 663 aa25.57■■□□□ 1.68
EPHB3-202ENST00000473079 WRNIP1Q96S55 665 aa25.57■■□□□ 1.68
EPHB3-202ENST00000473079 PTPN18Q99952 460 aa25.57■■□□□ 1.68
EPHB3-202ENST00000473079 SNCAIPQ9Y6H5 919 aa25.57■■□□□ 1.68
EPHB3-202ENST00000473079 FPGT-TNNI3KV9GXZ4 949 aa25.57■■□□□ 1.68
EPHB3-202ENST00000473079 FKTNO75072 461 aa25.56■■□□□ 1.68
EPHB3-202ENST00000473079 ENTPD3O75355 529 aa25.56■■□□□ 1.68
EPHB3-202ENST00000473079 GTF2A2P52657 109 aa25.56■■□□□ 1.68
EPHB3-202ENST00000473079 OS9Q13438 667 aaPredicted RBP25.56■■□□□ 1.68
EPHB3-202ENST00000473079 ERO1BQ86YB8 467 aa25.56■■□□□ 1.68
EPHB3-202ENST00000473079 PANK1Q8TE04 598 aa25.56■■□□□ 1.68
EPHB3-202ENST00000473079 ZNF112Q9UJU3 913 aa25.56■■□□□ 1.68
EPHB3-202ENST00000473079 MECOMQ03112 1051 aa25.55■■□□□ 1.68
EPHB3-202ENST00000473079 CNKSR2Q8WXI2 1034 aa25.55■■□□□ 1.68
EPHB3-202ENST00000473079 ZKSCAN4Q969J2 545 aaPredicted RBP25.55■■□□□ 1.68
EPHB3-202ENST00000473079 MROH7-TTC4A0A0A0MT08 1334 aa25.55■■□□□ 1.68
EPHB3-202ENST00000473079 GPR75-ASB3A0A0A6YYF3 556 aa25.54■■□□□ 1.68
EPHB3-202ENST00000473079 MCAMP43121 646 aa25.54■■□□□ 1.68
EPHB3-202ENST00000473079 RGS19P49795 217 aa25.54■■□□□ 1.68
EPHB3-202ENST00000473079 CEP85Q6P2H3 762 aa25.54■■□□□ 1.68
EPHB3-202ENST00000473079 MIGA2Q7L4E1 593 aa25.54■■□□□ 1.68
EPHB3-202ENST00000473079 ZNF384Q8TF68 577 aa25.54■■□□□ 1.68
EPHB3-202ENST00000473079 OTUD5Q96G74 571 aa25.54■■□□□ 1.68
EPHB3-202ENST00000473079 ZNF512BQ96KM6 892 aaPredicted RBP25.54■■□□□ 1.68
EPHB3-202ENST00000473079 MAP4K4O95819 1239 aaPredicted RBP25.53■■□□□ 1.68
EPHB3-202ENST00000473079 LDHCP07864 332 aa25.53■■□□□ 1.68
EPHB3-202ENST00000473079 GSTO1P78417 241 aa25.53■■□□□ 1.68
EPHB3-202ENST00000473079 CCDC158Q5M9N0 1113 aa25.53■■□□□ 1.68
EPHB3-202ENST00000473079 PI16Q6UXB8 463 aa25.53■■□□□ 1.68
EPHB3-202ENST00000473079 ZFPM1Q8IX07 1006 aa25.53■■□□□ 1.68
EPHB3-202ENST00000473079 BRI3BPQ8WY22 251 aa25.53■■□□□ 1.68
EPHB3-202ENST00000473079 NSUN4Q96CB9 384 aaKnown RBP25.53■■□□□ 1.68
EPHB3-202ENST00000473079 RFX7Q2KHR2 1363 aa25.53■■□□□ 1.68
EPHB3-202ENST00000473079 BTDP43251 543 aa25.52■■□□□ 1.68
EPHB3-202ENST00000473079 RGS3P49796 1198 aa25.52■■□□□ 1.68
EPHB3-202ENST00000473079 TBC1D9Q6ZT07 1266 aa25.52■■□□□ 1.68
EPHB3-202ENST00000473079 DBNDD2Q9BQY9 259 aa25.52■■□□□ 1.68
EPHB3-202ENST00000473079 CCL15-CCL14A0A0B4J2E2 113 aa25.51■■□□□ 1.67
EPHB3-202ENST00000473079 NPM3O75607 178 aaKnown RBP25.51■■□□□ 1.67
EPHB3-202ENST00000473079 WDHD1O75717 1129 aaPredicted RBP25.51■■□□□ 1.67
EPHB3-202ENST00000473079 MAP3K10Q02779 954 aa25.51■■□□□ 1.67
EPHB3-202ENST00000473079 PPATQ06203 517 aa25.51■■□□□ 1.67
EPHB3-202ENST00000473079 CRHR2Q13324 411 aa25.51■■□□□ 1.67
EPHB3-202ENST00000473079 PPIL2Q13356 520 aa25.51■■□□□ 1.67
EPHB3-202ENST00000473079 CCL15Q16663 113 aa25.51■■□□□ 1.67
EPHB3-202ENST00000473079 MYH2Q9UKX2 1941 aa25.51■■□□□ 1.67
EPHB3-202ENST00000473079 IGSF3O75054 1194 aa25.5■■□□□ 1.67
EPHB3-202ENST00000473079 CETPP11597 493 aa25.5■■□□□ 1.67
EPHB3-202ENST00000473079 INPP5BP32019 993 aa25.5■■□□□ 1.67
EPHB3-202ENST00000473079 RHBDL3P58872 404 aa25.5■■□□□ 1.67
EPHB3-202ENST00000473079 TTC39AQ5SRH9 613 aa25.5■■□□□ 1.67
EPHB3-202ENST00000473079 ATRNL1Q5VV63 1379 aa25.5■■□□□ 1.67
EPHB3-202ENST00000473079 NOL9Q5SY16 702 aaKnown RBP25.49■■□□□ 1.67
EPHB3-202ENST00000473079 ZCCHC17Q9NP64 241 aaKnown RBP25.49■■□□□ 1.67
EPHB3-202ENST00000473079 IRF6O14896 467 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms