RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 UNCXA6NJT0 531 aa19.01■□□□□ 0.63
COL1A1-203ENST00000471344 FKBP1CQ5VVH2 108 aa19.01■□□□□ 0.63
COL1A1-203ENST00000471344 ITPRIPQ8IWB1 547 aa19.01■□□□□ 0.63
COL1A1-203ENST00000471344 FTSJ3Q8IY81 847 aaKnown RBP19.01■□□□□ 0.63
COL1A1-203ENST00000471344 NEUROD6Q96NK8 337 aa19.01■□□□□ 0.63
COL1A1-203ENST00000471344 RPAP1Q9BWH6 1393 aaPredicted RBP19.01■□□□□ 0.63
COL1A1-203ENST00000471344 MAP3K9P80192 1104 aa19■□□□□ 0.63
COL1A1-203ENST00000471344 POLA2Q14181 598 aa19■□□□□ 0.63
COL1A1-203ENST00000471344 MIGA2Q7L4E1 593 aa19■□□□□ 0.63
COL1A1-203ENST00000471344 ZFPM1Q8IX07 1006 aa19■□□□□ 0.63
COL1A1-203ENST00000471344 ZKSCAN4Q969J2 545 aaPredicted RBP19■□□□□ 0.63
COL1A1-203ENST00000471344 WRNIP1Q96S55 665 aa19■□□□□ 0.63
COL1A1-203ENST00000471344 CFHR5Q9BXR6 569 aa19■□□□□ 0.63
COL1A1-203ENST00000471344 FAM198AQ9UFP1 575 aa19■□□□□ 0.63
COL1A1-203ENST00000471344 ABCF2Q9UG63 623 aa19■□□□□ 0.63
COL1A1-203ENST00000471344 AKAP2Q9Y2D5 859 aa19■□□□□ 0.63
COL1A1-203ENST00000471344 SNCAIPQ9Y6H5 919 aa19■□□□□ 0.63
COL1A1-203ENST00000471344 TNRC18O15417 2968 aaPredicted RBP19■□□□□ 0.63
COL1A1-203ENST00000471344 MVPQ14764 893 aaKnown RBP18.99■□□□□ 0.63
COL1A1-203ENST00000471344 ZNF384Q8TF68 577 aa18.99■□□□□ 0.63
COL1A1-203ENST00000471344 OTUD5Q96G74 571 aa18.99■□□□□ 0.63
COL1A1-203ENST00000471344 MS4A4AQ96JQ5 239 aa18.99■□□□□ 0.63
COL1A1-203ENST00000471344 USP40Q9NVE5 1235 aa18.99■□□□□ 0.63
COL1A1-203ENST00000471344 CENPFP49454 3210 aa18.98■□□□□ 0.63
COL1A1-203ENST00000471344 RFX7Q2KHR2 1363 aa18.98■□□□□ 0.63
COL1A1-203ENST00000471344 G3BP1Q13283 466 aaKnown RBP eCLIP18.98■□□□□ 0.63
COL1A1-203ENST00000471344 PANK1Q8TE04 598 aa18.98■□□□□ 0.63
COL1A1-203ENST00000471344 FAM151AQ8WW52 585 aa18.98■□□□□ 0.63
COL1A1-203ENST00000471344 BRI3BPQ8WY22 251 aa18.98■□□□□ 0.63
COL1A1-203ENST00000471344 HMG20BQ9P0W2 317 aa18.98■□□□□ 0.63
COL1A1-203ENST00000471344 CSADQ9Y600 493 aa18.98■□□□□ 0.63
COL1A1-203ENST00000471344 AK9Q5TCS8 1911 aa18.98■□□□□ 0.63
COL1A1-203ENST00000471344 GAKO14976 1311 aa18.98■□□□□ 0.63
COL1A1-203ENST00000471344 PDS5AQ29RF7 1337 aaKnown RBP18.98■□□□□ 0.63
COL1A1-203ENST00000471344 DOCK2Q92608 1830 aa18.97■□□□□ 0.63
COL1A1-203ENST00000471344 TESPA1A2RU30 521 aaPredicted RBP18.97■□□□□ 0.63
COL1A1-203ENST00000471344 ZBTB7BO15156 539 aaPredicted RBP18.97■□□□□ 0.63
COL1A1-203ENST00000471344 ZBTB22O15209 634 aa18.97■□□□□ 0.63
COL1A1-203ENST00000471344 FKTNO75072 461 aa18.97■□□□□ 0.63
COL1A1-203ENST00000471344 INPP5BP32019 993 aa18.97■□□□□ 0.63
COL1A1-203ENST00000471344 INHBEP58166 350 aa18.97■□□□□ 0.63
COL1A1-203ENST00000471344 CRHR2Q13324 411 aa18.97■□□□□ 0.63
COL1A1-203ENST00000471344 NOM1Q5C9Z4 860 aaKnown RBP18.97■□□□□ 0.63
COL1A1-203ENST00000471344 TBC1D9Q6ZT07 1266 aa18.97■□□□□ 0.63
COL1A1-203ENST00000471344 DZIP1Q86YF9 867 aaKnown RBP18.97■□□□□ 0.63
COL1A1-203ENST00000471344 SSH3Q8TE77 659 aa18.97■□□□□ 0.63
COL1A1-203ENST00000471344 ALDH1A1P00352 501 aa18.96■□□□□ 0.63
COL1A1-203ENST00000471344 SLURP2P0DP57 97 aa18.96■□□□□ 0.63
COL1A1-203ENST00000471344 MCAMP43121 646 aa18.96■□□□□ 0.63
COL1A1-203ENST00000471344 ATP8B2P98198 1209 aa18.96■□□□□ 0.63
COL1A1-203ENST00000471344 CAP1Q01518 475 aa18.96■□□□□ 0.63
COL1A1-203ENST00000471344 MECOMQ03112 1051 aa18.96■□□□□ 0.63
COL1A1-203ENST00000471344 HPS5Q9UPZ3 1129 aa18.96■□□□□ 0.63
COL1A1-203ENST00000471344 ATRNL1Q5VV63 1379 aa18.95■□□□□ 0.62
COL1A1-203ENST00000471344 CCL15-CCL14A0A0B4J2E2 113 aa18.95■□□□□ 0.62
COL1A1-203ENST00000471344 SPDYE5A6NIY4 337 aa18.95■□□□□ 0.62
COL1A1-203ENST00000471344 ARID4AP29374 1257 aaPredicted RBP18.95■□□□□ 0.62
COL1A1-203ENST00000471344 RGS3P49796 1198 aa18.95■□□□□ 0.62
COL1A1-203ENST00000471344 SOX10P56693 466 aa18.95■□□□□ 0.62
COL1A1-203ENST00000471344 CCL15Q16663 113 aa18.95■□□□□ 0.62
COL1A1-203ENST00000471344 GORABQ5T7V8 394 aa18.95■□□□□ 0.62
COL1A1-203ENST00000471344 ZGPATQ8N5A5 531 aaKnown RBP18.95■□□□□ 0.62
COL1A1-203ENST00000471344 DDX4Q9NQI0 724 aaKnown RBP18.95■□□□□ 0.62
COL1A1-203ENST00000471344 MROH7-TTC4A0A0A0MT08 1334 aa18.95■□□□□ 0.62
COL1A1-203ENST00000471344 BTDP43251 543 aa18.94■□□□□ 0.62
COL1A1-203ENST00000471344 TNNI3KQ59H18 835 aa18.94■□□□□ 0.62
COL1A1-203ENST00000471344 DCAF15Q66K64 600 aa18.94■□□□□ 0.62
COL1A1-203ENST00000471344 SH3BP5LQ7L8J4 393 aa18.94■□□□□ 0.62
COL1A1-203ENST00000471344 FAM43AQ8N2R8 423 aa18.94■□□□□ 0.62
COL1A1-203ENST00000471344 SPATA5Q8NB90 893 aa18.94■□□□□ 0.62
COL1A1-203ENST00000471344 DBNDD2Q9BQY9 259 aa18.94■□□□□ 0.62
COL1A1-203ENST00000471344 ZNF341Q9BYN7 854 aa18.94■□□□□ 0.62
COL1A1-203ENST00000471344 FPGT-TNNI3KV9GXZ4 949 aa18.94■□□□□ 0.62
COL1A1-203ENST00000471344 IRF6O14896 467 aa18.93■□□□□ 0.62
COL1A1-203ENST00000471344 SURF6O75683 361 aaKnown RBP18.93■□□□□ 0.62
COL1A1-203ENST00000471344 WDHD1O75717 1129 aaPredicted RBP18.93■□□□□ 0.62
COL1A1-203ENST00000471344 OS9Q13438 667 aaPredicted RBP18.93■□□□□ 0.62
COL1A1-203ENST00000471344 SNRKQ9NRH2 765 aa18.93■□□□□ 0.62
COL1A1-203ENST00000471344 TLR7Q9NYK1 1049 aaKnown RBP18.93■□□□□ 0.62
COL1A1-203ENST00000471344 ZSWIM8A7E2V4 1837 aa18.93■□□□□ 0.62
COL1A1-203ENST00000471344 MYO5AQ9Y4I1 1855 aaKnown RBP18.92■□□□□ 0.62
COL1A1-203ENST00000471344 MAST2Q6P0Q8 1798 aa18.92■□□□□ 0.62
COL1A1-203ENST00000471344 RGS19P49795 217 aa18.92■□□□□ 0.62
COL1A1-203ENST00000471344 GTF2A2P52657 109 aa18.92■□□□□ 0.62
COL1A1-203ENST00000471344 PICALMQ13492 652 aa18.92■□□□□ 0.62
COL1A1-203ENST00000471344 CEP85Q6P2H3 762 aa18.92■□□□□ 0.62
COL1A1-203ENST00000471344 ERICH6Q7L0X2 663 aa18.92■□□□□ 0.62
COL1A1-203ENST00000471344 ERO1BQ86YB8 467 aa18.92■□□□□ 0.62
COL1A1-203ENST00000471344 CD99L2Q8TCZ2 262 aa18.92■□□□□ 0.62
COL1A1-203ENST00000471344 HOOK2Q96ED9 719 aa18.92■□□□□ 0.62
COL1A1-203ENST00000471344 IDI2Q9BXS1 227 aa18.92■□□□□ 0.62
COL1A1-203ENST00000471344 ZNF112Q9UJU3 913 aa18.92■□□□□ 0.62
COL1A1-203ENST00000471344 DDTLA6NHG4 134 aaPredicted RBP18.91■□□□□ 0.62
COL1A1-203ENST00000471344 RHBDL3P58872 404 aa18.91■□□□□ 0.62
COL1A1-203ENST00000471344 SPTY2D1Q68D10 685 aaPredicted RBP18.91■□□□□ 0.62
COL1A1-203ENST00000471344 NSUN4Q96CB9 384 aaKnown RBP18.91■□□□□ 0.62
COL1A1-203ENST00000471344 FAM163AQ96GL9 167 aaPredicted RBP18.91■□□□□ 0.62
COL1A1-203ENST00000471344 BRCA2P51587 3418 aa18.9■□□□□ 0.62
COL1A1-203ENST00000471344 PPIL2Q13356 520 aa18.9■□□□□ 0.62
COL1A1-203ENST00000471344 OTUD7BQ6GQQ9 843 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms