RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 TCP10L2B9ZVM9 353 aa13.29□□□□□ -0.28
RFTN1-208ENST00000470458 ENTPD3O75355 529 aa13.29□□□□□ -0.28
RFTN1-208ENST00000470458 ADORA1P30542 326 aa13.29□□□□□ -0.28
RFTN1-208ENST00000470458 LDLRAD1Q5T700 205 aa13.29□□□□□ -0.28
RFTN1-208ENST00000470458 RHPN1Q8TCX5 695 aa13.29□□□□□ -0.28
RFTN1-208ENST00000470458 FAM151AQ8WW52 585 aa13.29□□□□□ -0.28
RFTN1-208ENST00000470458 USP40Q9NVE5 1235 aa13.29□□□□□ -0.28
RFTN1-208ENST00000470458 RAI14Q9P0K7 980 aa13.29□□□□□ -0.28
RFTN1-208ENST00000470458 HMG20BQ9P0W2 317 aa13.29□□□□□ -0.28
RFTN1-208ENST00000470458 MANSC4A6NHS7 340 aaPredicted RBP13.28□□□□□ -0.28
RFTN1-208ENST00000470458 UBE2Q2LH0YL09 131 aa13.28□□□□□ -0.28
RFTN1-208ENST00000470458 PRDX5P30044 214 aa13.28□□□□□ -0.28
RFTN1-208ENST00000470458 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.28□□□□□ -0.28
RFTN1-208ENST00000470458 IDI2Q9BXS1 227 aa13.28□□□□□ -0.28
RFTN1-208ENST00000470458 DAGLAQ9Y4D2 1042 aa13.28□□□□□ -0.28
RFTN1-208ENST00000470458 GAKO14976 1311 aa13.28□□□□□ -0.28
RFTN1-208ENST00000470458 GPR75-ASB3A0A0A6YYF3 556 aa13.27□□□□□ -0.29
RFTN1-208ENST00000470458 FAM155AB1AL88 458 aaPredicted RBP13.27□□□□□ -0.29
RFTN1-208ENST00000470458 MAP3K9P80192 1104 aa13.27□□□□□ -0.29
RFTN1-208ENST00000470458 KIF23Q02241 960 aaPredicted RBP13.27□□□□□ -0.29
RFTN1-208ENST00000470458 MAP3K12Q12852 859 aa13.27□□□□□ -0.29
RFTN1-208ENST00000470458 CDC42EP5Q6NZY7 148 aa13.27□□□□□ -0.29
RFTN1-208ENST00000470458 AACSQ86V21 672 aa13.27□□□□□ -0.29
RFTN1-208ENST00000470458 GPATCH3Q96I76 525 aa13.27□□□□□ -0.29
RFTN1-208ENST00000470458 ZNF341Q9BYN7 854 aa13.27□□□□□ -0.29
RFTN1-208ENST00000470458 LRRCC1Q9C099 1032 aa13.27□□□□□ -0.29
RFTN1-208ENST00000470458 EXOC6BQ9Y2D4 811 aa13.27□□□□□ -0.29
RFTN1-208ENST00000470458 MROH7-TTC4A0A0A0MT08 1334 aa13.27□□□□□ -0.29
RFTN1-208ENST00000470458 TM4SF4P48230 202 aa13.26□□□□□ -0.29
RFTN1-208ENST00000470458 MECOMQ03112 1051 aa13.26□□□□□ -0.29
RFTN1-208ENST00000470458 NBPF12Q5TAG4 269 aaPredicted RBP13.26□□□□□ -0.29
RFTN1-208ENST00000470458 PRAMEF18Q5VWM3 479 aa13.26□□□□□ -0.29
RFTN1-208ENST00000470458 NAA16Q6N069 864 aaPredicted RBP13.26□□□□□ -0.29
RFTN1-208ENST00000470458 RASAL3Q86YV0 1011 aa13.26□□□□□ -0.29
RFTN1-208ENST00000470458 YTHDC1Q96MU7 727 aaKnown RBP13.26□□□□□ -0.29
RFTN1-208ENST00000470458 DBNDD2Q9BQY9 259 aa13.26□□□□□ -0.29
RFTN1-208ENST00000470458 AOC2O75106 756 aa13.25□□□□□ -0.29
RFTN1-208ENST00000470458 USP2O75604 605 aaPredicted RBP13.25□□□□□ -0.29
RFTN1-208ENST00000470458 MCAMP43121 646 aa13.25□□□□□ -0.29
RFTN1-208ENST00000470458 RRP1P56182 461 aaKnown RBP13.25□□□□□ -0.29
RFTN1-208ENST00000470458 LRRFIP1Q32MZ4 808 aaKnown RBP13.25□□□□□ -0.29
RFTN1-208ENST00000470458 NSUN4Q96CB9 384 aaKnown RBP13.25□□□□□ -0.29
RFTN1-208ENST00000470458 EAF2Q96CJ1 260 aaPredicted RBP13.25□□□□□ -0.29
RFTN1-208ENST00000470458 TEPSINQ96N21 525 aa13.25□□□□□ -0.29
RFTN1-208ENST00000470458 DHX36Q9H2U1 1008 aaKnown RBP13.25□□□□□ -0.29
RFTN1-208ENST00000470458 DBNLQ9UJU6 430 aaKnown RBP13.25□□□□□ -0.29
RFTN1-208ENST00000470458 FOXN1O15353 648 aa13.24□□□□□ -0.29
RFTN1-208ENST00000470458 BTDP43251 543 aa13.24□□□□□ -0.29
RFTN1-208ENST00000470458 PRKG1Q13976 671 aa13.24□□□□□ -0.29
RFTN1-208ENST00000470458 DIXDC1Q155Q3 683 aa13.24□□□□□ -0.29
RFTN1-208ENST00000470458 GRIK5Q16478 980 aa13.24□□□□□ -0.29
RFTN1-208ENST00000470458 NOM1Q5C9Z4 860 aaKnown RBP13.24□□□□□ -0.29
RFTN1-208ENST00000470458 SPRYD7Q5W111 196 aa13.24□□□□□ -0.29
RFTN1-208ENST00000470458 DLK2Q6UY11 383 aa13.24□□□□□ -0.29
RFTN1-208ENST00000470458 ZSCAN29Q8IWY8 852 aaPredicted RBP13.24□□□□□ -0.29
RFTN1-208ENST00000470458 CSRNP1Q96S65 589 aa13.24□□□□□ -0.29
RFTN1-208ENST00000470458 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.24□□□□□ -0.29
RFTN1-208ENST00000470458 TMEM39BQ9GZU3 492 aa13.24□□□□□ -0.29
RFTN1-208ENST00000470458 CCDC8Q9H0W5 538 aaPredicted RBP13.24□□□□□ -0.29
RFTN1-208ENST00000470458 TAOK2Q9UL54 1235 aa13.24□□□□□ -0.29
RFTN1-208ENST00000470458 PCDHAC2Q9Y5I4 1007 aa13.24□□□□□ -0.29
RFTN1-208ENST00000470458 GTF2A2P52657 109 aa13.23□□□□□ -0.29
RFTN1-208ENST00000470458 PPP4CP60510 307 aa13.23□□□□□ -0.29
RFTN1-208ENST00000470458 ZSCAN25Q6NSZ9 544 aa13.23□□□□□ -0.29
RFTN1-208ENST00000470458 TBC1D2Q9BYX2 928 aa13.23□□□□□ -0.29
RFTN1-208ENST00000470458 DCTPP1Q9H773 170 aa13.23□□□□□ -0.29
RFTN1-208ENST00000470458 SCAF8Q9UPN6 1271 aaKnown RBP13.23□□□□□ -0.29
RFTN1-208ENST00000470458 TBC1D12O60347 775 aa13.22□□□□□ -0.29
RFTN1-208ENST00000470458 HSPA8P11142 646 aaKnown RBP13.22□□□□□ -0.29
RFTN1-208ENST00000470458 LBX1P52954 281 aa13.22□□□□□ -0.29
RFTN1-208ENST00000470458 ARHGEF6Q15052 776 aa13.22□□□□□ -0.29
RFTN1-208ENST00000470458 ERO1BQ86YB8 467 aa13.22□□□□□ -0.29
RFTN1-208ENST00000470458 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.22□□□□□ -0.29
RFTN1-208ENST00000470458 WNK4Q96J92 1243 aa13.22□□□□□ -0.29
RFTN1-208ENST00000470458 CFHR5Q9BXR6 569 aa13.22□□□□□ -0.29
RFTN1-208ENST00000470458 ZCCHC17Q9NP64 241 aaKnown RBP13.22□□□□□ -0.29
RFTN1-208ENST00000470458 IDH1O75874 414 aaKnown RBP13.21□□□□□ -0.29
RFTN1-208ENST00000470458 CYP2E1P05181 493 aaPredicted RBP13.21□□□□□ -0.29
RFTN1-208ENST00000470458 ATP5JP18859 108 aa13.21□□□□□ -0.29
RFTN1-208ENST00000470458 RGS3P49796 1198 aa13.21□□□□□ -0.29
RFTN1-208ENST00000470458 PPATQ06203 517 aa13.21□□□□□ -0.29
RFTN1-208ENST00000470458 TCP10Q12799 353 aa13.21□□□□□ -0.29
RFTN1-208ENST00000470458 TBC1D9Q6ZT07 1266 aa13.21□□□□□ -0.29
RFTN1-208ENST00000470458 MOB2Q70IA6 237 aa13.21□□□□□ -0.29
RFTN1-208ENST00000470458 SIRT2Q8IXJ6 389 aa13.21□□□□□ -0.29
RFTN1-208ENST00000470458 TNS4Q8IZW8 715 aa13.21□□□□□ -0.29
RFTN1-208ENST00000470458 GCC1Q96CN9 775 aa13.21□□□□□ -0.29
RFTN1-208ENST00000470458 WRNIP1Q96S55 665 aa13.21□□□□□ -0.29
RFTN1-208ENST00000470458 IL1RAPL2Q9NP60 686 aa13.21□□□□□ -0.29
RFTN1-208ENST00000470458 GINM1Q9NU53 330 aa13.21□□□□□ -0.29
RFTN1-208ENST00000470458 RNF186Q9NXI6 227 aa13.21□□□□□ -0.29
RFTN1-208ENST00000470458 PI4KBQ9UBF8 816 aa13.21□□□□□ -0.29
RFTN1-208ENST00000470458 HERC5Q9UII4 1024 aaKnown RBP13.21□□□□□ -0.29
RFTN1-208ENST00000470458 COL2A1P02458 1487 aaPredicted RBP13.21□□□□□ -0.3
RFTN1-208ENST00000470458 APBB1O00213 710 aa13.2□□□□□ -0.3
RFTN1-208ENST00000470458 ERC2O15083 957 aa13.2□□□□□ -0.3
RFTN1-208ENST00000470458 TRPA1O75762 1119 aa13.2□□□□□ -0.3
RFTN1-208ENST00000470458 CETPP11597 493 aa13.2□□□□□ -0.3
RFTN1-208ENST00000470458 ZAP70P43403 619 aa13.2□□□□□ -0.3
RFTN1-208ENST00000470458 C20orf194Q5TEA3 1177 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms