RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 NBPF11Q86T75 865 aa15.32■□□□□ 0.04
COL5A1-207ENST00000469093 FAM151AQ8WW52 585 aa15.32■□□□□ 0.04
COL5A1-207ENST00000469093 GCC1Q96CN9 775 aa15.32■□□□□ 0.04
COL5A1-207ENST00000469093 ZNF341Q9BYN7 854 aa15.32■□□□□ 0.04
COL5A1-207ENST00000469093 ARHGAP39Q9C0H5 1083 aa15.32■□□□□ 0.04
COL5A1-207ENST00000469093 LACTBP83111 547 aaPredicted RBP15.31■□□□□ 0.04
COL5A1-207ENST00000469093 PPATQ06203 517 aa15.31■□□□□ 0.04
COL5A1-207ENST00000469093 ALDH1L2Q3SY69 923 aa15.31■□□□□ 0.04
COL5A1-207ENST00000469093 SLC9C1Q4G0N8 1177 aa15.31■□□□□ 0.04
COL5A1-207ENST00000469093 CDCA7LQ96GN5 454 aa15.31■□□□□ 0.04
COL5A1-207ENST00000469093 ZNF112Q9UJU3 913 aa15.31■□□□□ 0.04
COL5A1-207ENST00000469093 DAGLAQ9Y4D2 1042 aa15.31■□□□□ 0.04
COL5A1-207ENST00000469093 MKI67P46013 3256 aaKnown RBP15.3■□□□□ 0.04
COL5A1-207ENST00000469093 TCP10Q12799 353 aa15.3■□□□□ 0.04
COL5A1-207ENST00000469093 NFIAQ12857 509 aa15.3■□□□□ 0.04
COL5A1-207ENST00000469093 DIXDC1Q155Q3 683 aa15.3■□□□□ 0.04
COL5A1-207ENST00000469093 C17orf99Q6UX52 265 aa15.3■□□□□ 0.04
COL5A1-207ENST00000469093 ARAP2Q8WZ64 1704 aa15.3■□□□□ 0.04
COL5A1-207ENST00000469093 FBXO3Q9UK99 471 aa15.3■□□□□ 0.04
COL5A1-207ENST00000469093 RPAP1Q9BWH6 1393 aaPredicted RBP15.29■□□□□ 0.04
COL5A1-207ENST00000469093 CIAO1O76071 339 aa15.29■□□□□ 0.04
COL5A1-207ENST00000469093 PRDX5P30044 214 aa15.29■□□□□ 0.04
COL5A1-207ENST00000469093 KIF22Q14807 665 aa15.29■□□□□ 0.04
COL5A1-207ENST00000469093 HABP4Q5JVS0 413 aaKnown RBP15.29■□□□□ 0.04
COL5A1-207ENST00000469093 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.29■□□□□ 0.04
COL5A1-207ENST00000469093 SIL1Q9H173 461 aa15.29■□□□□ 0.04
COL5A1-207ENST00000469093 CEP126Q9P2H0 1117 aa15.29■□□□□ 0.04
COL5A1-207ENST00000469093 FAM198AQ9UFP1 575 aa15.29■□□□□ 0.04
COL5A1-207ENST00000469093 CENPFP49454 3210 aa15.29■□□□□ 0.04
COL5A1-207ENST00000469093 MYCP01106 439 aaPredicted RBP15.28■□□□□ 0.04
COL5A1-207ENST00000469093 GNRH1P01148 92 aa15.28■□□□□ 0.04
COL5A1-207ENST00000469093 LDHBP07195 334 aaKnown RBP15.28■□□□□ 0.04
COL5A1-207ENST00000469093 UBTFL1P0CB47 393 aaPredicted RBP15.28■□□□□ 0.04
COL5A1-207ENST00000469093 ATP2B3Q16720 1220 aa15.28■□□□□ 0.04
COL5A1-207ENST00000469093 SLC4A8Q2Y0W8 1093 aa15.28■□□□□ 0.04
COL5A1-207ENST00000469093 ANKRD23Q86SG2 305 aa15.28■□□□□ 0.04
COL5A1-207ENST00000469093 ZFPM1Q8IX07 1006 aa15.28■□□□□ 0.04
COL5A1-207ENST00000469093 TRMT2AQ8IZ69 625 aaKnown RBP15.28■□□□□ 0.04
COL5A1-207ENST00000469093 SH3TC2Q8TF17 1288 aa15.28■□□□□ 0.04
COL5A1-207ENST00000469093 SMC4Q9NTJ3 1288 aa15.28■□□□□ 0.04
COL5A1-207ENST00000469093 USP40Q9NVE5 1235 aa15.28■□□□□ 0.04
COL5A1-207ENST00000469093 GNL3LQ9NVN8 582 aaKnown RBP15.28■□□□□ 0.04
COL5A1-207ENST00000469093 KCNH4Q9UQ05 1017 aa15.28■□□□□ 0.04
COL5A1-207ENST00000469093 PDHXO00330 501 aa15.27■□□□□ 0.04
COL5A1-207ENST00000469093 CTGFP29279 349 aa15.27■□□□□ 0.04
COL5A1-207ENST00000469093 MOGSQ13724 837 aa15.27■□□□□ 0.04
COL5A1-207ENST00000469093 CPA4Q9UI42 421 aa15.27■□□□□ 0.04
COL5A1-207ENST00000469093 NOB1Q9ULX3 412 aaKnown RBP15.27■□□□□ 0.04
COL5A1-207ENST00000469093 SALL1Q9NSC2 1324 aa15.26■□□□□ 0.03
COL5A1-207ENST00000469093 SEMA3EO15041 775 aa15.26■□□□□ 0.03
COL5A1-207ENST00000469093 ECM2O94769 699 aaPredicted RBP15.26■□□□□ 0.03
COL5A1-207ENST00000469093 PHKA1P46020 1223 aa15.26■□□□□ 0.03
COL5A1-207ENST00000469093 PRMT2P55345 433 aa15.26■□□□□ 0.03
COL5A1-207ENST00000469093 NOL9Q5SY16 702 aaKnown RBP15.26■□□□□ 0.03
COL5A1-207ENST00000469093 DENND2AQ9ULE3 1009 aa15.26■□□□□ 0.03
COL5A1-207ENST00000469093 PHF20L1A8MW92 1017 aa15.25■□□□□ 0.03
COL5A1-207ENST00000469093 ZBTB22O15209 634 aa15.25■□□□□ 0.03
COL5A1-207ENST00000469093 IL15P40933 162 aaPredicted RBP15.25■□□□□ 0.03
COL5A1-207ENST00000469093 PSMC4P43686 418 aa15.25■□□□□ 0.03
COL5A1-207ENST00000469093 TRIM47Q96LD4 638 aa15.25■□□□□ 0.03
COL5A1-207ENST00000469093 PA2G4Q9UQ80 394 aaKnown RBP15.25■□□□□ 0.03
COL5A1-207ENST00000469093 LRRFIP2Q9Y608 721 aaKnown RBP15.25■□□□□ 0.03
COL5A1-207ENST00000469093 RBBP6Q7Z6E9 1792 aaKnown RBP15.24■□□□□ 0.03
COL5A1-207ENST00000469093 ADGRA2Q96PE1 1338 aa15.24■□□□□ 0.03
COL5A1-207ENST00000469093 CXCL11O14625 94 aa15.24■□□□□ 0.03
COL5A1-207ENST00000469093 ADORA1P30542 326 aa15.24■□□□□ 0.03
COL5A1-207ENST00000469093 TIMM10P62072 90 aa15.24■□□□□ 0.03
COL5A1-207ENST00000469093 CCDC102BQ68D86 513 aa15.24■□□□□ 0.03
COL5A1-207ENST00000469093 GPAT2Q6NUI2 795 aa15.24■□□□□ 0.03
COL5A1-207ENST00000469093 IDI2Q9BXS1 227 aa15.24■□□□□ 0.03
COL5A1-207ENST00000469093 COPRSQ9NQ92 184 aa15.24■□□□□ 0.03
COL5A1-207ENST00000469093 SRRDQ9UH36 339 aa15.24■□□□□ 0.03
COL5A1-207ENST00000469093 HDAC5Q9UQL6 1122 aa15.24■□□□□ 0.03
COL5A1-207ENST00000469093 CEP290O15078 2479 aa15.23■□□□□ 0.03
COL5A1-207ENST00000469093 ENTPD3O75355 529 aa15.23■□□□□ 0.03
COL5A1-207ENST00000469093 OSBPP22059 807 aa15.23■□□□□ 0.03
COL5A1-207ENST00000469093 HOXD10P28358 340 aa15.23■□□□□ 0.03
COL5A1-207ENST00000469093 RGS3P49796 1198 aa15.23■□□□□ 0.03
COL5A1-207ENST00000469093 MAP3K10Q02779 954 aa15.23■□□□□ 0.03
COL5A1-207ENST00000469093 SH3BP5LQ7L8J4 393 aa15.23■□□□□ 0.03
COL5A1-207ENST00000469093 API5Q9BZZ5 524 aaKnown RBP15.23■□□□□ 0.03
COL5A1-207ENST00000469093 BRCA2P51587 3418 aa15.23■□□□□ 0.03
COL5A1-207ENST00000469093 GAKO14976 1311 aa15.22■□□□□ 0.03
COL5A1-207ENST00000469093 FMNL1O95466 1100 aaPredicted RBP15.22■□□□□ 0.03
COL5A1-207ENST00000469093 CT47B1P0C2W7 299 aaPredicted RBP15.22■□□□□ 0.03
COL5A1-207ENST00000469093 RASGRF1Q13972 1273 aa15.22■□□□□ 0.03
COL5A1-207ENST00000469093 MTFR1Q15390 333 aa15.22■□□□□ 0.03
COL5A1-207ENST00000469093 ZGPATQ8N5A5 531 aaKnown RBP15.22■□□□□ 0.03
COL5A1-207ENST00000469093 FAM163AQ96GL9 167 aaPredicted RBP15.22■□□□□ 0.03
COL5A1-207ENST00000469093 MEIS3Q99687 375 aa15.22■□□□□ 0.03
COL5A1-207ENST00000469093 ZHX2Q9Y6X8 837 aa15.22■□□□□ 0.03
COL5A1-207ENST00000469093 CYP2C8P10632 490 aa15.21■□□□□ 0.03
COL5A1-207ENST00000469093 PTPRAP18433 802 aa15.21■□□□□ 0.03
COL5A1-207ENST00000469093 SCYL3Q8IZE3 742 aa15.21■□□□□ 0.03
COL5A1-207ENST00000469093 RAET1EQ8TD07 263 aa15.21■□□□□ 0.03
COL5A1-207ENST00000469093 PARK7Q99497 189 aaKnown RBP15.21■□□□□ 0.03
COL5A1-207ENST00000469093 ABCF2Q9UG63 623 aa15.21■□□□□ 0.03
COL5A1-207ENST00000469093 COLQQ9Y215 455 aaPredicted RBP15.21■□□□□ 0.03
COL5A1-207ENST00000469093 ZSWIM8A7E2V4 1837 aa15.21■□□□□ 0.03
COL5A1-207ENST00000469093 AK9Q5TCS8 1911 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 1611.4 ms