RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 NLRP8Q86W28 1048 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 FCHSD1Q86WN1 690 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 ZNF295-AS1Q8N0V1 137 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 ANKRD20A12PQ8NF67 263 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 PSMD1Q99460 953 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 PAIP2Q9BPZ3 127 aaKnown RBP5.7□□□□□ -1.5
SF3B1-207ENST00000468925 KRTAP17-1Q9BYP8 105 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 ALG2Q9H553 416 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 CXorf56Q9H5V9 222 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 A1CFQ9NQ94 594 aaKnown RBP5.7□□□□□ -1.5
SF3B1-207ENST00000468925 RRP7BPQ9NSQ0 103 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 LRRC4BQ9NT99 713 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 KLF15Q9UIH9 416 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 PTPRCP08575 1304 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 ADGRL2O95490 1459 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 PLB1Q6P1J6 1458 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 DAPK1P53355 1430 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 GOLIM4O00461 696 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 CDK2AP1O14519 115 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 CDC45O75419 566 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 SLU7O95391 586 aaKnown RBP5.69□□□□□ -1.5
SF3B1-207ENST00000468925 TUBBP07437 444 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 ARAFP10398 606 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 TNNT1P13805 278 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 ZNF16P17020 682 aaPredicted RBP5.69□□□□□ -1.5
SF3B1-207ENST00000468925 HOXB4P17483 251 aaPredicted RBP5.69□□□□□ -1.5
SF3B1-207ENST00000468925 MX1P20591 662 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 MAP2K2P36507 400 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 KCNJ6P48051 423 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 RARSP54136 660 aaKnown RBP5.69□□□□□ -1.5
SF3B1-207ENST00000468925 IRX1P78414 480 aaPredicted RBP5.69□□□□□ -1.5
SF3B1-207ENST00000468925 SF3B2Q13435 895 aaKnown RBP5.69□□□□□ -1.5
SF3B1-207ENST00000468925 MTFR1Q15390 333 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 ZSCAN26Q16670 478 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 NBPF6Q5VWK0 638 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 TMCO3Q6UWJ1 677 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 LINC00114Q6XXX2 140 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 MMS22LQ6ZRQ5 1243 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 CHSY3Q70JA7 882 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 NBPF5PQ86XG9 351 aaPredicted RBP5.69□□□□□ -1.5
SF3B1-207ENST00000468925 ERC1Q8IUD2 1116 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 SLC9A9Q8IVB4 645 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 FMNL3Q8IVF7 1028 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 EFCAB13Q8IY85 973 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 TPCN2Q8NHX9 752 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 GPT2Q8TD30 523 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 NBPF4Q96M43 638 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 SLC4A9Q96Q91 983 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 SLC52A1Q9NWF4 448 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 TMEM63CQ9P1W3 806 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 KIAA1024Q9UPX6 916 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 ADGBQ8N7X0 1667 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 FAM135AQ9P2D6 1515 aa5.69□□□□□ -1.5
SF3B1-207ENST00000468925 PLEKHG2Q9H7P9 1386 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 CEP170Q5SW79 1584 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 A6NNZ2 444 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 BACH1O14867 736 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 LGR5O75473 907 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 BCAR3O75815 825 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 EIF3JO75822 258 aaKnown RBP5.68□□□□□ -1.5
SF3B1-207ENST00000468925 CCDC192P0DO97 292 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 ADH6P28332 368 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 PPP2R1AP30153 589 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 SARNPP82979 210 aaKnown RBP5.68□□□□□ -1.5
SF3B1-207ENST00000468925 TUBB8Q3ZCM7 444 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 LRCH2Q5VUJ6 765 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 CEP135Q66GS9 1140 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 RAB44Q7Z6P3 723 aaPredicted RBP5.68□□□□□ -1.5
SF3B1-207ENST00000468925 DZIP1LQ8IYY4 767 aaKnown RBP5.68□□□□□ -1.5
SF3B1-207ENST00000468925 JMYQ8N9B5 988 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 C1orf216Q8TAB5 229 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 ADAMTS19Q8TE59 1207 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 UBXN4Q92575 508 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 DDX11Q96FC9 970 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 ZDHHC3Q9NYG2 299 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 SCHIP1Q9P0W5 487 aaPredicted RBP5.68□□□□□ -1.5
SF3B1-207ENST00000468925 PZPP20742 1482 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 ITSN2Q9NZM3 1697 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 WDR33Q9C0J8 1336 aaKnown RBP5.68□□□□□ -1.5
SF3B1-207ENST00000468925 ASXL1Q8IXJ9 1541 aa5.68□□□□□ -1.5
SF3B1-207ENST00000468925 EIF4G3O43432 1585 aaKnown RBP5.67□□□□□ -1.5
SF3B1-207ENST00000468925 CFAP74Q9C0B2 1584 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 CLTCL1P53675 1640 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 ANKRD50Q9ULJ7 1429 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 ADGRL1O94910 1474 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 CFTRP13569 1480 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 MYOM2P54296 1465 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 ERICH4A6NGS2 130 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 PES1O00541 588 aaKnown RBP5.67□□□□□ -1.5
SF3B1-207ENST00000468925 GNB5O14775 395 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 H2AFXP16104 143 aaPredicted RBP5.67□□□□□ -1.5
SF3B1-207ENST00000468925 ACTN2P35609 894 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 DGKGP49619 791 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 EIF5P55010 431 aaKnown RBP5.67□□□□□ -1.5
SF3B1-207ENST00000468925 UBE2HP62256 183 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 RBM6P78332 1123 aaKnown RBP5.67□□□□□ -1.5
SF3B1-207ENST00000468925 PTPN14Q15678 1187 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 INTS3Q68E01 1043 aaKnown RBP5.67□□□□□ -1.5
SF3B1-207ENST00000468925 TTLL5Q6EMB2 1281 aa5.67□□□□□ -1.5
SF3B1-207ENST00000468925 KRBA2Q6ZNG9 492 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms