RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 AKAP11Q9UKA4 1901 aa15.98■□□□□ 0.15
COL28A1-206ENST00000465339 MCAMP43121 646 aa15.98■□□□□ 0.15
COL28A1-206ENST00000465339 ERICH6Q7L0X2 663 aa15.98■□□□□ 0.15
COL28A1-206ENST00000465339 ARMC9Q7Z3E5 817 aa15.98■□□□□ 0.15
COL28A1-206ENST00000465339 CCDC8Q9H0W5 538 aaPredicted RBP15.98■□□□□ 0.15
COL28A1-206ENST00000465339 DBNLQ9UJU6 430 aaKnown RBP15.98■□□□□ 0.15
COL28A1-206ENST00000465339 ZNF157P51786 506 aaPredicted RBP15.97■□□□□ 0.15
COL28A1-206ENST00000465339 MAP2K1Q02750 393 aaPredicted RBP15.97■□□□□ 0.15
COL28A1-206ENST00000465339 GRM1Q13255 1194 aa15.97■□□□□ 0.15
COL28A1-206ENST00000465339 TTLL12Q14166 644 aaPredicted RBP15.97■□□□□ 0.15
COL28A1-206ENST00000465339 DIXDC1Q155Q3 683 aa15.97■□□□□ 0.15
COL28A1-206ENST00000465339 AACSQ86V21 672 aa15.97■□□□□ 0.15
COL28A1-206ENST00000465339 DZIP1Q86YF9 867 aaKnown RBP15.97■□□□□ 0.15
COL28A1-206ENST00000465339 CLASRPQ8N2M8 674 aaKnown RBP15.97■□□□□ 0.15
COL28A1-206ENST00000465339 FAM163AQ96GL9 167 aaPredicted RBP15.97■□□□□ 0.15
COL28A1-206ENST00000465339 DAGLAQ9Y4D2 1042 aa15.97■□□□□ 0.15
COL28A1-206ENST00000465339 TCP10L2B9ZVM9 353 aa15.96■□□□□ 0.15
COL28A1-206ENST00000465339 UBE2Q2LH0YL09 131 aa15.96■□□□□ 0.15
COL28A1-206ENST00000465339 PPP1R12BO60237 982 aaPredicted RBP15.96■□□□□ 0.15
COL28A1-206ENST00000465339 IGSF3O75054 1194 aa15.96■□□□□ 0.15
COL28A1-206ENST00000465339 LDHCP07864 332 aa15.96■□□□□ 0.15
COL28A1-206ENST00000465339 GSTO1P78417 241 aa15.96■□□□□ 0.15
COL28A1-206ENST00000465339 NOGQ13253 232 aa15.96■□□□□ 0.15
COL28A1-206ENST00000465339 FAM83AQ86UY5 434 aa15.96■□□□□ 0.15
COL28A1-206ENST00000465339 IL1RAPL2Q9NP60 686 aa15.96■□□□□ 0.15
COL28A1-206ENST00000465339 THSD7BQ9C0I4 1608 aa15.95■□□□□ 0.14
COL28A1-206ENST00000465339 UNCXA6NJT0 531 aa15.95■□□□□ 0.14
COL28A1-206ENST00000465339 APBB1O00213 710 aa15.95■□□□□ 0.14
COL28A1-206ENST00000465339 NBPF12Q5TAG4 269 aaPredicted RBP15.95■□□□□ 0.14
COL28A1-206ENST00000465339 PI16Q6UXB8 463 aa15.95■□□□□ 0.14
COL28A1-206ENST00000465339 TBC1D9Q6ZT07 1266 aa15.95■□□□□ 0.14
COL28A1-206ENST00000465339 MOB2Q70IA6 237 aa15.95■□□□□ 0.14
COL28A1-206ENST00000465339 TLR7Q9NYK1 1049 aaKnown RBP15.95■□□□□ 0.14
COL28A1-206ENST00000465339 LRP2BPQ9P2M1 347 aa15.95■□□□□ 0.14
COL28A1-206ENST00000465339 GAKO14976 1311 aa15.94■□□□□ 0.14
COL28A1-206ENST00000465339 AOC2O75106 756 aa15.94■□□□□ 0.14
COL28A1-206ENST00000465339 IFIT2P09913 472 aaKnown RBP15.94■□□□□ 0.14
COL28A1-206ENST00000465339 HSPA1AP0DMV8 641 aaKnown RBP15.94■□□□□ 0.14
COL28A1-206ENST00000465339 HSPA1BP0DMV9 641 aaKnown RBP15.94■□□□□ 0.14
COL28A1-206ENST00000465339 MECOMQ03112 1051 aa15.94■□□□□ 0.14
COL28A1-206ENST00000465339 MAP3K11Q16584 847 aa15.94■□□□□ 0.14
COL28A1-206ENST00000465339 CDC42EP5Q6NZY7 148 aa15.94■□□□□ 0.14
COL28A1-206ENST00000465339 TEPSINQ96N21 525 aa15.94■□□□□ 0.14
COL28A1-206ENST00000465339 DCTPP1Q9H773 170 aa15.94■□□□□ 0.14
COL28A1-206ENST00000465339 SNRKQ9NRH2 765 aa15.94■□□□□ 0.14
COL28A1-206ENST00000465339 USP40Q9NVE5 1235 aa15.94■□□□□ 0.14
COL28A1-206ENST00000465339 WBP1LQ9NX94 342 aa15.94■□□□□ 0.14
COL28A1-206ENST00000465339 RAI14Q9P0K7 980 aa15.94■□□□□ 0.14
COL28A1-206ENST00000465339 ANGEL1Q9UNK9 670 aaKnown RBP15.94■□□□□ 0.14
COL28A1-206ENST00000465339 FAM155AB1AL88 458 aaPredicted RBP15.93■□□□□ 0.14
COL28A1-206ENST00000465339 CYP2E1P05181 493 aaPredicted RBP15.93■□□□□ 0.14
COL28A1-206ENST00000465339 CACNB3P54284 484 aa15.93■□□□□ 0.14
COL28A1-206ENST00000465339 AAMPQ13685 434 aa15.93■□□□□ 0.14
COL28A1-206ENST00000465339 PRKG1Q13976 671 aa15.93■□□□□ 0.14
COL28A1-206ENST00000465339 LDLRAD1Q5T700 205 aa15.93■□□□□ 0.14
COL28A1-206ENST00000465339 AIDAQ96BJ3 306 aa15.93■□□□□ 0.14
COL28A1-206ENST00000465339 NSUN4Q96CB9 384 aaKnown RBP15.93■□□□□ 0.14
COL28A1-206ENST00000465339 HOOK2Q96ED9 719 aa15.93■□□□□ 0.14
COL28A1-206ENST00000465339 CRBNQ96SW2 442 aa15.93■□□□□ 0.14
COL28A1-206ENST00000465339 LRRCC1Q9C099 1032 aa15.93■□□□□ 0.14
COL28A1-206ENST00000465339 TMEM39BQ9GZU3 492 aa15.93■□□□□ 0.14
COL28A1-206ENST00000465339 AK9Q5TCS8 1911 aa15.93■□□□□ 0.14
COL28A1-206ENST00000465339 GPR75-ASB3A0A0A6YYF3 556 aa15.92■□□□□ 0.14
COL28A1-206ENST00000465339 MAP4K4O95819 1239 aaPredicted RBP15.92■□□□□ 0.14
COL28A1-206ENST00000465339 SLC10A3P09131 477 aa15.92■□□□□ 0.14
COL28A1-206ENST00000465339 ZAP70P43403 619 aa15.92■□□□□ 0.14
COL28A1-206ENST00000465339 IREB2P48200 963 aaKnown RBP15.92■□□□□ 0.14
COL28A1-206ENST00000465339 FAM151AQ8WW52 585 aa15.92■□□□□ 0.14
COL28A1-206ENST00000465339 BEGAINQ9BUH8 593 aa15.92■□□□□ 0.14
COL28A1-206ENST00000465339 MYO5AQ9Y4I1 1855 aaKnown RBP15.92■□□□□ 0.14
COL28A1-206ENST00000465339 MROH7-TTC4A0A0A0MT08 1334 aa15.92■□□□□ 0.14
COL28A1-206ENST00000465339 SSC5DA1L4H1 1573 aa15.92■□□□□ 0.14
COL28A1-206ENST00000465339 USP2O75604 605 aaPredicted RBP15.91■□□□□ 0.14
COL28A1-206ENST00000465339 ZNF384Q8TF68 577 aa15.91■□□□□ 0.14
COL28A1-206ENST00000465339 IDI2Q9BXS1 227 aa15.91■□□□□ 0.14
COL28A1-206ENST00000465339 PCDHB15Q9Y5E8 787 aa15.91■□□□□ 0.14
COL28A1-206ENST00000465339 RPAP1Q9BWH6 1393 aaPredicted RBP15.9■□□□□ 0.14
COL28A1-206ENST00000465339 PCNTO95613 3336 aa15.9■□□□□ 0.14
COL28A1-206ENST00000465339 C19orf67A6NJJ6 358 aa15.9■□□□□ 0.14
COL28A1-206ENST00000465339 ENTPD3O75355 529 aa15.9■□□□□ 0.14
COL28A1-206ENST00000465339 BTDP43251 543 aa15.9■□□□□ 0.14
COL28A1-206ENST00000465339 KIF23Q02241 960 aaPredicted RBP15.9■□□□□ 0.14
COL28A1-206ENST00000465339 NAA16Q6N069 864 aaPredicted RBP15.9■□□□□ 0.14
COL28A1-206ENST00000465339 TMED8Q6PL24 325 aaPredicted RBP15.9■□□□□ 0.14
COL28A1-206ENST00000465339 RASAL3Q86YV0 1011 aa15.9■□□□□ 0.14
COL28A1-206ENST00000465339 ANKRD13AQ8IZ07 590 aa15.9■□□□□ 0.14
COL28A1-206ENST00000465339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.9■□□□□ 0.14
COL28A1-206ENST00000465339 SLC10A4Q96EP9 437 aa15.9■□□□□ 0.14
COL28A1-206ENST00000465339 TTF1Q15361 905 aaPredicted RBP15.89■□□□□ 0.13
COL28A1-206ENST00000465339 NOL10Q9BSC4 688 aaKnown RBP15.89■□□□□ 0.13
COL28A1-206ENST00000465339 FAM198AQ9UFP1 575 aa15.89■□□□□ 0.13
COL28A1-206ENST00000465339 FZD1Q9UP38 647 aa15.89■□□□□ 0.13
COL28A1-206ENST00000465339 MAST2Q6P0Q8 1798 aa15.89■□□□□ 0.13
COL28A1-206ENST00000465339 FOXN1O15353 648 aa15.88■□□□□ 0.13
COL28A1-206ENST00000465339 CA12O43570 354 aa15.88■□□□□ 0.13
COL28A1-206ENST00000465339 BAG3O95817 575 aa15.88■□□□□ 0.13
COL28A1-206ENST00000465339 CTCFP49711 727 aaPredicted RBP15.88■□□□□ 0.13
COL28A1-206ENST00000465339 EVX2Q03828 476 aa15.88■□□□□ 0.13
COL28A1-206ENST00000465339 TCP10Q12799 353 aa15.88■□□□□ 0.13
COL28A1-206ENST00000465339 NFIAQ12857 509 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms