RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 DBNDD2Q9BQY9 259 aa19.94■□□□□ 0.78
COL1A1-202ENST00000463440 EXOC6BQ9Y2D4 811 aa19.94■□□□□ 0.78
COL1A1-202ENST00000463440 USP2O75604 605 aaPredicted RBP19.93■□□□□ 0.78
COL1A1-202ENST00000463440 MCAMP43121 646 aa19.93■□□□□ 0.78
COL1A1-202ENST00000463440 CDC42EP5Q6NZY7 148 aa19.93■□□□□ 0.78
COL1A1-202ENST00000463440 TNS4Q8IZW8 715 aa19.93■□□□□ 0.78
COL1A1-202ENST00000463440 HOOK2Q96ED9 719 aa19.93■□□□□ 0.78
COL1A1-202ENST00000463440 YTHDC1Q96MU7 727 aaKnown RBP19.93■□□□□ 0.78
COL1A1-202ENST00000463440 PI16Q6UXB8 463 aa19.92■□□□□ 0.78
COL1A1-202ENST00000463440 ANKRD13AQ8IZ07 590 aa19.92■□□□□ 0.78
COL1A1-202ENST00000463440 USP40Q9NVE5 1235 aa19.92■□□□□ 0.78
COL1A1-202ENST00000463440 SAGE1Q9NXZ1 904 aa19.92■□□□□ 0.78
COL1A1-202ENST00000463440 TSKSQ9UJT2 592 aa19.92■□□□□ 0.78
COL1A1-202ENST00000463440 GAKO14976 1311 aa19.92■□□□□ 0.78
COL1A1-202ENST00000463440 GSTO1P78417 241 aa19.91■□□□□ 0.78
COL1A1-202ENST00000463440 CDAN1Q8IWY9 1227 aa19.91■□□□□ 0.78
COL1A1-202ENST00000463440 EAF2Q96CJ1 260 aaPredicted RBP19.91■□□□□ 0.78
COL1A1-202ENST00000463440 FAM163AQ96GL9 167 aaPredicted RBP19.91■□□□□ 0.78
COL1A1-202ENST00000463440 ZNF512BQ96KM6 892 aaPredicted RBP19.91■□□□□ 0.78
COL1A1-202ENST00000463440 CCDC8Q9H0W5 538 aaPredicted RBP19.91■□□□□ 0.78
COL1A1-202ENST00000463440 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.91■□□□□ 0.78
COL1A1-202ENST00000463440 DBNLQ9UJU6 430 aaKnown RBP19.91■□□□□ 0.78
COL1A1-202ENST00000463440 MYH2Q9UKX2 1941 aa19.91■□□□□ 0.78
COL1A1-202ENST00000463440 RPAP1Q9BWH6 1393 aaPredicted RBP19.91■□□□□ 0.78
COL1A1-202ENST00000463440 MECOMQ03112 1051 aa19.9■□□□□ 0.78
COL1A1-202ENST00000463440 MKRN3Q13064 507 aaKnown RBP19.9■□□□□ 0.78
COL1A1-202ENST00000463440 IFFO2Q5TF58 517 aa19.9■□□□□ 0.78
COL1A1-202ENST00000463440 SPRYD7Q5W111 196 aa19.9■□□□□ 0.78
COL1A1-202ENST00000463440 TBC1D9Q6ZT07 1266 aa19.9■□□□□ 0.78
COL1A1-202ENST00000463440 FAM151AQ8WW52 585 aa19.9■□□□□ 0.78
COL1A1-202ENST00000463440 CLMNQ96JQ2 1002 aa19.9■□□□□ 0.78
COL1A1-202ENST00000463440 RAI14Q9P0K7 980 aa19.9■□□□□ 0.78
COL1A1-202ENST00000463440 LRP2BPQ9P2M1 347 aa19.9■□□□□ 0.78
COL1A1-202ENST00000463440 AKAP11Q9UKA4 1901 aa19.9■□□□□ 0.78
COL1A1-202ENST00000463440 MROH7-TTC4A0A0A0MT08 1334 aa19.89■□□□□ 0.77
COL1A1-202ENST00000463440 LDHCP07864 332 aa19.89■□□□□ 0.77
COL1A1-202ENST00000463440 SREBF2Q12772 1141 aa19.89■□□□□ 0.77
COL1A1-202ENST00000463440 SIRT2Q8IXJ6 389 aa19.89■□□□□ 0.77
COL1A1-202ENST00000463440 RHPN1Q8TCX5 695 aa19.89■□□□□ 0.77
COL1A1-202ENST00000463440 SNRKQ9NRH2 765 aa19.89■□□□□ 0.77
COL1A1-202ENST00000463440 RNF186Q9NXI6 227 aa19.89■□□□□ 0.77
COL1A1-202ENST00000463440 TLR7Q9NYK1 1049 aaKnown RBP19.89■□□□□ 0.77
COL1A1-202ENST00000463440 TRPA1O75762 1119 aa19.88■□□□□ 0.77
COL1A1-202ENST00000463440 ZBTB48P10074 688 aaPredicted RBP19.88■□□□□ 0.77
COL1A1-202ENST00000463440 BTDP43251 543 aa19.88■□□□□ 0.77
COL1A1-202ENST00000463440 TCP10Q12799 353 aa19.88■□□□□ 0.77
COL1A1-202ENST00000463440 NFIAQ12857 509 aa19.88■□□□□ 0.77
COL1A1-202ENST00000463440 DCAF15Q66K64 600 aa19.88■□□□□ 0.77
COL1A1-202ENST00000463440 AACSQ86V21 672 aa19.88■□□□□ 0.77
COL1A1-202ENST00000463440 NSUN4Q96CB9 384 aaKnown RBP19.88■□□□□ 0.77
COL1A1-202ENST00000463440 KIF1BPQ96EK5 621 aa19.88■□□□□ 0.77
COL1A1-202ENST00000463440 WNK4Q96J92 1243 aa19.88■□□□□ 0.77
COL1A1-202ENST00000463440 RAB11FIP3O75154 756 aa19.87■□□□□ 0.77
COL1A1-202ENST00000463440 TM4SF4P48230 202 aa19.87■□□□□ 0.77
COL1A1-202ENST00000463440 MAP3K9P80192 1104 aa19.87■□□□□ 0.77
COL1A1-202ENST00000463440 CLASRPQ8N2M8 674 aaKnown RBP19.87■□□□□ 0.77
COL1A1-202ENST00000463440 IDI2Q9BXS1 227 aa19.87■□□□□ 0.77
COL1A1-202ENST00000463440 IL1RAPL2Q9NP60 686 aa19.87■□□□□ 0.77
COL1A1-202ENST00000463440 CSADQ9Y600 493 aa19.87■□□□□ 0.77
COL1A1-202ENST00000463440 GPR75-ASB3A0A0A6YYF3 556 aa19.86■□□□□ 0.77
COL1A1-202ENST00000463440 MANSC4A6NHS7 340 aaPredicted RBP19.86■□□□□ 0.77
COL1A1-202ENST00000463440 APBB1O00213 710 aa19.86■□□□□ 0.77
COL1A1-202ENST00000463440 ENTPD3O75355 529 aa19.86■□□□□ 0.77
COL1A1-202ENST00000463440 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.86■□□□□ 0.77
COL1A1-202ENST00000463440 FAM198AQ9UFP1 575 aa19.86■□□□□ 0.77
COL1A1-202ENST00000463440 IGSF3O75054 1194 aa19.85■□□□□ 0.77
COL1A1-202ENST00000463440 MAP4K4O95819 1239 aaPredicted RBP19.85■□□□□ 0.77
COL1A1-202ENST00000463440 CYP2E1P05181 493 aaPredicted RBP19.85■□□□□ 0.77
COL1A1-202ENST00000463440 ZAP70P43403 619 aa19.85■□□□□ 0.77
COL1A1-202ENST00000463440 RGS3P49796 1198 aa19.85■□□□□ 0.77
COL1A1-202ENST00000463440 INHBEP58166 350 aa19.85■□□□□ 0.77
COL1A1-202ENST00000463440 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.85■□□□□ 0.77
COL1A1-202ENST00000463440 ZNF384Q8TF68 577 aa19.85■□□□□ 0.77
COL1A1-202ENST00000463440 ZNF341Q9BYN7 854 aa19.85■□□□□ 0.77
COL1A1-202ENST00000463440 ELP3Q9H9T3 547 aa19.85■□□□□ 0.77
COL1A1-202ENST00000463440 OTOFQ9HC10 1997 aa19.84■□□□□ 0.77
COL1A1-202ENST00000463440 AK9Q5TCS8 1911 aa19.84■□□□□ 0.77
COL1A1-202ENST00000463440 VGLL4Q14135 290 aa19.84■□□□□ 0.77
COL1A1-202ENST00000463440 NAA16Q6N069 864 aaPredicted RBP19.84■□□□□ 0.77
COL1A1-202ENST00000463440 WRNIP1Q96S55 665 aa19.84■□□□□ 0.77
COL1A1-202ENST00000463440 NOL10Q9BSC4 688 aaKnown RBP19.84■□□□□ 0.77
COL1A1-202ENST00000463440 IFIT2P09913 472 aaKnown RBP19.83■□□□□ 0.77
COL1A1-202ENST00000463440 RRP1P56182 461 aaKnown RBP19.83■□□□□ 0.77
COL1A1-202ENST00000463440 MIGA2Q7L4E1 593 aa19.83■□□□□ 0.77
COL1A1-202ENST00000463440 OPTNQ96CV9 577 aa19.83■□□□□ 0.77
COL1A1-202ENST00000463440 WDHD1O75717 1129 aaPredicted RBP19.82■□□□□ 0.76
COL1A1-202ENST00000463440 RHBDL3P58872 404 aa19.82■□□□□ 0.76
COL1A1-202ENST00000463440 ZSCAN29Q8IWY8 852 aaPredicted RBP19.82■□□□□ 0.76
COL1A1-202ENST00000463440 ZFPM1Q8IX07 1006 aa19.82■□□□□ 0.76
COL1A1-202ENST00000463440 RFX7Q2KHR2 1363 aa19.82■□□□□ 0.76
COL1A1-202ENST00000463440 NPM3O75607 178 aaKnown RBP19.81■□□□□ 0.76
COL1A1-202ENST00000463440 BAG3O95817 575 aa19.81■□□□□ 0.76
COL1A1-202ENST00000463440 ALDH1A1P00352 501 aa19.81■□□□□ 0.76
COL1A1-202ENST00000463440 GJA5P36382 358 aa19.81■□□□□ 0.76
COL1A1-202ENST00000463440 PICALMQ13492 652 aa19.81■□□□□ 0.76
COL1A1-202ENST00000463440 BCL11AQ9H165 835 aa19.81■□□□□ 0.76
COL1A1-202ENST00000463440 PIH1D3Q9NQM4 214 aaKnown RBP19.81■□□□□ 0.76
COL1A1-202ENST00000463440 CASP8AP2Q9UKL3 1982 aa19.81■□□□□ 0.76
COL1A1-202ENST00000463440 MAST2Q6P0Q8 1798 aa19.8■□□□□ 0.76
COL1A1-202ENST00000463440 PLCG2P16885 1265 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms