RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ALDH1L2Q3SY69 923 aa24.73■■□□□ 1.55
VARS-221ENST00000463184 RBBP6Q7Z6E9 1792 aaKnown RBP24.72■■□□□ 1.55
VARS-221ENST00000463184 BTBD19C9JJ37 291 aa24.72■■□□□ 1.55
VARS-221ENST00000463184 EN2P19622 333 aaPredicted RBP24.72■■□□□ 1.55
VARS-221ENST00000463184 PPATQ06203 517 aa24.72■■□□□ 1.55
VARS-221ENST00000463184 KIF22Q14807 665 aa24.72■■□□□ 1.55
VARS-221ENST00000463184 SLC9C1Q4G0N8 1177 aa24.72■■□□□ 1.55
VARS-221ENST00000463184 ZNF341Q9BYN7 854 aa24.72■■□□□ 1.55
VARS-221ENST00000463184 PTCH2Q9Y6C5 1203 aa24.72■■□□□ 1.55
VARS-221ENST00000463184 SLFN5Q08AF3 891 aa24.71■■□□□ 1.55
VARS-221ENST00000463184 FAM151AQ8WW52 585 aa24.71■■□□□ 1.55
VARS-221ENST00000463184 FBXO3Q9UK99 471 aa24.71■■□□□ 1.55
VARS-221ENST00000463184 MIGA2Q7L4E1 593 aa24.7■■□□□ 1.54
VARS-221ENST00000463184 ATG9AQ7Z3C6 839 aa24.7■■□□□ 1.54
VARS-221ENST00000463184 MIER1Q8N108 512 aa24.7■■□□□ 1.54
VARS-221ENST00000463184 GNRH1P01148 92 aa24.69■■□□□ 1.54
VARS-221ENST00000463184 LACTBP83111 547 aaPredicted RBP24.69■■□□□ 1.54
VARS-221ENST00000463184 GNL3LQ9NVN8 582 aaKnown RBP24.69■■□□□ 1.54
VARS-221ENST00000463184 BRCA2P51587 3418 aa24.69■■□□□ 1.54
VARS-221ENST00000463184 ZNF112Q9UJU3 913 aa24.68■■□□□ 1.54
VARS-221ENST00000463184 DAGLAQ9Y4D2 1042 aa24.68■■□□□ 1.54
VARS-221ENST00000463184 CIAO1O76071 339 aa24.67■■□□□ 1.54
VARS-221ENST00000463184 INPP5BP32019 993 aa24.67■■□□□ 1.54
VARS-221ENST00000463184 SLC4A8Q2Y0W8 1093 aa24.67■■□□□ 1.54
VARS-221ENST00000463184 CDC42EP5Q6NZY7 148 aa24.67■■□□□ 1.54
VARS-221ENST00000463184 SMC4Q9NTJ3 1288 aa24.67■■□□□ 1.54
VARS-221ENST00000463184 CEP126Q9P2H0 1117 aa24.67■■□□□ 1.54
VARS-221ENST00000463184 UBTFL1P0CB47 393 aaPredicted RBP24.66■■□□□ 1.54
VARS-221ENST00000463184 PRMT2P55345 433 aa24.66■■□□□ 1.54
VARS-221ENST00000463184 TCP10Q12799 353 aa24.66■■□□□ 1.54
VARS-221ENST00000463184 ATP2B3Q16720 1220 aa24.66■■□□□ 1.54
VARS-221ENST00000463184 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.66■■□□□ 1.54
VARS-221ENST00000463184 ARHGAP39Q9C0H5 1083 aa24.66■■□□□ 1.54
VARS-221ENST00000463184 LDHBP07195 334 aaKnown RBP24.65■■□□□ 1.54
VARS-221ENST00000463184 PRDX5P30044 214 aa24.65■■□□□ 1.54
VARS-221ENST00000463184 DIXDC1Q155Q3 683 aa24.65■■□□□ 1.54
VARS-221ENST00000463184 C17orf99Q6UX52 265 aa24.65■■□□□ 1.54
VARS-221ENST00000463184 ANKRD23Q86SG2 305 aa24.65■■□□□ 1.54
VARS-221ENST00000463184 SIL1Q9H173 461 aa24.65■■□□□ 1.54
VARS-221ENST00000463184 DENND2AQ9ULE3 1009 aa24.65■■□□□ 1.54
VARS-221ENST00000463184 KCNH4Q9UQ05 1017 aa24.65■■□□□ 1.54
VARS-221ENST00000463184 HDAC5Q9UQL6 1122 aa24.65■■□□□ 1.54
VARS-221ENST00000463184 SALL1Q9NSC2 1324 aa24.64■■□□□ 1.54
VARS-221ENST00000463184 SEMA3EO15041 775 aa24.64■■□□□ 1.54
VARS-221ENST00000463184 HABP4Q5JVS0 413 aaKnown RBP24.64■■□□□ 1.54
VARS-221ENST00000463184 USP40Q9NVE5 1235 aa24.64■■□□□ 1.54
VARS-221ENST00000463184 MYH13Q9UKX3 1938 aa24.64■■□□□ 1.53
VARS-221ENST00000463184 NFIAQ12857 509 aa24.63■■□□□ 1.53
VARS-221ENST00000463184 NOL9Q5SY16 702 aaKnown RBP24.63■■□□□ 1.53
VARS-221ENST00000463184 PDHXO00330 501 aa24.62■■□□□ 1.53
VARS-221ENST00000463184 ZBTB22O15209 634 aa24.62■■□□□ 1.53
VARS-221ENST00000463184 CT47B1P0C2W7 299 aaPredicted RBP24.62■■□□□ 1.53
VARS-221ENST00000463184 IL15P40933 162 aaPredicted RBP24.62■■□□□ 1.53
VARS-221ENST00000463184 CDCA7LQ96GN5 454 aa24.62■■□□□ 1.53
VARS-221ENST00000463184 FAM198AQ9UFP1 575 aa24.62■■□□□ 1.53
VARS-221ENST00000463184 HOXD10P28358 340 aa24.61■■□□□ 1.53
VARS-221ENST00000463184 TRMT2AQ8IZ69 625 aaKnown RBP24.61■■□□□ 1.53
VARS-221ENST00000463184 ZGPATQ8N5A5 531 aaKnown RBP24.61■■□□□ 1.53
VARS-221ENST00000463184 SH3TC2Q8TF17 1288 aa24.61■■□□□ 1.53
VARS-221ENST00000463184 CPA4Q9UI42 421 aa24.61■■□□□ 1.53
VARS-221ENST00000463184 NOB1Q9ULX3 412 aaKnown RBP24.6■■□□□ 1.53
VARS-221ENST00000463184 AK9Q5TCS8 1911 aa24.6■■□□□ 1.53
VARS-221ENST00000463184 MYCP01106 439 aaPredicted RBP24.59■■□□□ 1.53
VARS-221ENST00000463184 PSMC4P43686 418 aa24.59■■□□□ 1.53
VARS-221ENST00000463184 PHKA1P46020 1223 aa24.59■■□□□ 1.53
VARS-221ENST00000463184 API5Q9BZZ5 524 aaKnown RBP24.59■■□□□ 1.53
VARS-221ENST00000463184 SRRDQ9UH36 339 aa24.59■■□□□ 1.53
VARS-221ENST00000463184 LRRFIP2Q9Y608 721 aaKnown RBP24.59■■□□□ 1.53
VARS-221ENST00000463184 CXCL11O14625 94 aa24.58■■□□□ 1.53
VARS-221ENST00000463184 MOGSQ13724 837 aa24.58■■□□□ 1.53
VARS-221ENST00000463184 IDI2Q9BXS1 227 aa24.58■■□□□ 1.53
VARS-221ENST00000463184 COPRSQ9NQ92 184 aa24.58■■□□□ 1.53
VARS-221ENST00000463184 ADGRA2Q96PE1 1338 aa24.58■■□□□ 1.52
VARS-221ENST00000463184 ENTPD3O75355 529 aa24.57■■□□□ 1.52
VARS-221ENST00000463184 CCDC102BQ68D86 513 aa24.57■■□□□ 1.52
VARS-221ENST00000463184 ZFPM1Q8IX07 1006 aa24.57■■□□□ 1.52
VARS-221ENST00000463184 PA2G4Q9UQ80 394 aaKnown RBP24.57■■□□□ 1.52
VARS-221ENST00000463184 FMNL1O95466 1100 aaPredicted RBP24.56■■□□□ 1.52
VARS-221ENST00000463184 CTGFP29279 349 aa24.56■■□□□ 1.52
VARS-221ENST00000463184 SLF2Q8IX21 1173 aa24.56■■□□□ 1.52
VARS-221ENST00000463184 TRIM47Q96LD4 638 aa24.56■■□□□ 1.52
VARS-221ENST00000463184 PARK7Q99497 189 aaKnown RBP24.56■■□□□ 1.52
VARS-221ENST00000463184 ZSWIM8A7E2V4 1837 aa24.56■■□□□ 1.52
VARS-221ENST00000463184 PHF20L1A8MW92 1017 aa24.55■■□□□ 1.52
VARS-221ENST00000463184 ECM2O94769 699 aaPredicted RBP24.55■■□□□ 1.52
VARS-221ENST00000463184 OSBPP22059 807 aa24.55■■□□□ 1.52
VARS-221ENST00000463184 ADORA1P30542 326 aa24.55■■□□□ 1.52
VARS-221ENST00000463184 RGS3P49796 1198 aa24.55■■□□□ 1.52
VARS-221ENST00000463184 RAET1EQ8TD07 263 aa24.55■■□□□ 1.52
VARS-221ENST00000463184 GAKO14976 1311 aa24.55■■□□□ 1.52
VARS-221ENST00000463184 GPAT2Q6NUI2 795 aa24.54■■□□□ 1.52
VARS-221ENST00000463184 FASTKD5Q7L8L6 764 aaKnown RBP24.54■■□□□ 1.52
VARS-221ENST00000463184 DZIP1Q86YF9 867 aaKnown RBP24.54■■□□□ 1.52
VARS-221ENST00000463184 SCYL3Q8IZE3 742 aa24.54■■□□□ 1.52
VARS-221ENST00000463184 FAM163AQ96GL9 167 aaPredicted RBP24.54■■□□□ 1.52
VARS-221ENST00000463184 PICK1Q9NRD5 415 aa24.54■■□□□ 1.52
VARS-221ENST00000463184 PDS5AQ29RF7 1337 aaKnown RBP24.54■■□□□ 1.52
VARS-221ENST00000463184 ATRNL1Q5VV63 1379 aa24.54■■□□□ 1.52
VARS-221ENST00000463184 GRK4P32298 578 aa24.53■■□□□ 1.52
VARS-221ENST00000463184 TIMM10P62072 90 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms