RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 SSH3Q8TE77 659 aa10.94□□□□□ -0.66
DDX39B-216ENST00000462421 KIF1BPQ96EK5 621 aa10.94□□□□□ -0.66
DDX39B-216ENST00000462421 ZBED3Q96IU2 234 aaPredicted RBP10.94□□□□□ -0.66
DDX39B-216ENST00000462421 USP40Q9NVE5 1235 aa10.94□□□□□ -0.66
DDX39B-216ENST00000462421 RNF216Q9NWF9 866 aaPredicted RBP10.94□□□□□ -0.66
DDX39B-216ENST00000462421 SAGE1Q9NXZ1 904 aa10.94□□□□□ -0.66
DDX39B-216ENST00000462421 FPGT-TNNI3KV9GXZ4 949 aa10.94□□□□□ -0.66
DDX39B-216ENST00000462421 IGSF3O75054 1194 aa10.93□□□□□ -0.66
DDX39B-216ENST00000462421 RAB11FIP3O75154 756 aa10.93□□□□□ -0.66
DDX39B-216ENST00000462421 MAP4K4O95819 1239 aaPredicted RBP10.93□□□□□ -0.66
DDX39B-216ENST00000462421 RLBP1P12271 317 aa10.93□□□□□ -0.66
DDX39B-216ENST00000462421 INHBEP58166 350 aa10.93□□□□□ -0.66
DDX39B-216ENST00000462421 RASGRF1Q13972 1273 aa10.93□□□□□ -0.66
DDX39B-216ENST00000462421 POLA2Q14181 598 aa10.93□□□□□ -0.66
DDX39B-216ENST00000462421 TTF1Q15361 905 aaPredicted RBP10.93□□□□□ -0.66
DDX39B-216ENST00000462421 DLK2Q6UY11 383 aa10.93□□□□□ -0.66
DDX39B-216ENST00000462421 CERS3Q8IU89 383 aa10.93□□□□□ -0.66
DDX39B-216ENST00000462421 NPM3O75607 178 aaKnown RBP10.92□□□□□ -0.66
DDX39B-216ENST00000462421 ZBTB48P10074 688 aaPredicted RBP10.92□□□□□ -0.66
DDX39B-216ENST00000462421 PRDX5P30044 214 aa10.92□□□□□ -0.66
DDX39B-216ENST00000462421 TCP10Q12799 353 aa10.92□□□□□ -0.66
DDX39B-216ENST00000462421 NBPF12Q5TAG4 269 aaPredicted RBP10.92□□□□□ -0.66
DDX39B-216ENST00000462421 NAA16Q6N069 864 aaPredicted RBP10.92□□□□□ -0.66
DDX39B-216ENST00000462421 ZNF341Q9BYN7 854 aa10.92□□□□□ -0.66
DDX39B-216ENST00000462421 TMEM39BQ9GZU3 492 aa10.92□□□□□ -0.66
DDX39B-216ENST00000462421 EXOC6BQ9Y2D4 811 aa10.92□□□□□ -0.66
DDX39B-216ENST00000462421 DAGLAQ9Y4D2 1042 aa10.92□□□□□ -0.66
DDX39B-216ENST00000462421 A0A1B0GUL6 1792 aa10.92□□□□□ -0.66
DDX39B-216ENST00000462421 MROH7-TTC4A0A0A0MT08 1334 aa10.91□□□□□ -0.66
DDX39B-216ENST00000462421 TRPA1O75762 1119 aa10.91□□□□□ -0.66
DDX39B-216ENST00000462421 HSPA8P11142 646 aaKnown RBP10.91□□□□□ -0.66
DDX39B-216ENST00000462421 ARID4AP29374 1257 aaPredicted RBP10.91□□□□□ -0.66
DDX39B-216ENST00000462421 BTDP43251 543 aa10.91□□□□□ -0.66
DDX39B-216ENST00000462421 CACNB3P54284 484 aa10.91□□□□□ -0.66
DDX39B-216ENST00000462421 MAP3K9P80192 1104 aa10.91□□□□□ -0.66
DDX39B-216ENST00000462421 MAP3K12Q12852 859 aa10.91□□□□□ -0.66
DDX39B-216ENST00000462421 PICALMQ13492 652 aa10.91□□□□□ -0.66
DDX39B-216ENST00000462421 ARHGEF6Q15052 776 aa10.91□□□□□ -0.66
DDX39B-216ENST00000462421 DIXDC1Q155Q3 683 aa10.91□□□□□ -0.66
DDX39B-216ENST00000462421 MOB2Q70IA6 237 aa10.91□□□□□ -0.66
DDX39B-216ENST00000462421 FAM151AQ8WW52 585 aa10.91□□□□□ -0.66
DDX39B-216ENST00000462421 WRNIP1Q96S55 665 aa10.91□□□□□ -0.66
DDX39B-216ENST00000462421 PICK1Q9NRD5 415 aa10.91□□□□□ -0.66
DDX39B-216ENST00000462421 NOP58Q9Y2X3 529 aaKnown RBP10.91□□□□□ -0.66
DDX39B-216ENST00000462421 PCDHAC2Q9Y5I4 1007 aa10.91□□□□□ -0.66
DDX39B-216ENST00000462421 RPAP1Q9BWH6 1393 aaPredicted RBP10.9□□□□□ -0.66
DDX39B-216ENST00000462421 ENTPD3O75355 529 aa10.9□□□□□ -0.66
DDX39B-216ENST00000462421 CAPN15O75808 1086 aa10.9□□□□□ -0.66
DDX39B-216ENST00000462421 IDH1O75874 414 aaKnown RBP10.9□□□□□ -0.66
DDX39B-216ENST00000462421 GTF2A2P52657 109 aa10.9□□□□□ -0.66
DDX39B-216ENST00000462421 MAP3K11Q16584 847 aa10.9□□□□□ -0.66
DDX39B-216ENST00000462421 COL13A1Q5TAT6 717 aaPredicted RBP10.9□□□□□ -0.66
DDX39B-216ENST00000462421 CDC42EP5Q6NZY7 148 aa10.9□□□□□ -0.66
DDX39B-216ENST00000462421 TMED8Q6PL24 325 aaPredicted RBP10.9□□□□□ -0.66
DDX39B-216ENST00000462421 DDRGK1Q96HY6 314 aa10.9□□□□□ -0.66
DDX39B-216ENST00000462421 CSRNP1Q96S65 589 aa10.9□□□□□ -0.66
DDX39B-216ENST00000462421 DBNDD2Q9BQY9 259 aa10.9□□□□□ -0.66
DDX39B-216ENST00000462421 CCDC8Q9H0W5 538 aaPredicted RBP10.9□□□□□ -0.66
DDX39B-216ENST00000462421 ELP3Q9H9T3 547 aa10.9□□□□□ -0.66
DDX39B-216ENST00000462421 HMG20BQ9P0W2 317 aa10.9□□□□□ -0.66
DDX39B-216ENST00000462421 TSKSQ9UJT2 592 aa10.9□□□□□ -0.66
DDX39B-216ENST00000462421 ARAP2Q8WZ64 1704 aa10.89□□□□□ -0.67
DDX39B-216ENST00000462421 FAM155AB1AL88 458 aaPredicted RBP10.89□□□□□ -0.67
DDX39B-216ENST00000462421 ZBTB22O15209 634 aa10.89□□□□□ -0.67
DDX39B-216ENST00000462421 HLA-DOAP06340 250 aa10.89□□□□□ -0.67
DDX39B-216ENST00000462421 MECOMQ03112 1051 aa10.89□□□□□ -0.67
DDX39B-216ENST00000462421 LRRFIP1Q32MZ4 808 aaKnown RBP10.89□□□□□ -0.67
DDX39B-216ENST00000462421 SPRYD7Q5W111 196 aa10.89□□□□□ -0.67
DDX39B-216ENST00000462421 APOBEC3HQ6NTF7 200 aaKnown RBP10.89□□□□□ -0.67
DDX39B-216ENST00000462421 AMOTL1Q8IY63 956 aa10.89□□□□□ -0.67
DDX39B-216ENST00000462421 TEX11Q8IYF3 940 aa10.89□□□□□ -0.67
DDX39B-216ENST00000462421 CRACR2BQ8N4Y2 399 aaPredicted RBP10.89□□□□□ -0.67
DDX39B-216ENST00000462421 OPTNQ96CV9 577 aa10.89□□□□□ -0.67
DDX39B-216ENST00000462421 WNK4Q96J92 1243 aa10.89□□□□□ -0.67
DDX39B-216ENST00000462421 LRRCC1Q9C099 1032 aa10.89□□□□□ -0.67
DDX39B-216ENST00000462421 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.89□□□□□ -0.674e-10■□□□□ 10
DDX39B-216ENST00000462421 USP5P45974 858 aa10.88□□□□□ -0.67
DDX39B-216ENST00000462421 RGS3P49796 1198 aa10.88□□□□□ -0.67
DDX39B-216ENST00000462421 KIF22Q14807 665 aa10.88□□□□□ -0.67
DDX39B-216ENST00000462421 LDLRAD1Q5T700 205 aa10.88□□□□□ -0.67
DDX39B-216ENST00000462421 RHPN1Q8TCX5 695 aa10.88□□□□□ -0.67
DDX39B-216ENST00000462421 OTUD5Q96G74 571 aa10.88□□□□□ -0.67
DDX39B-216ENST00000462421 ZNF512BQ96KM6 892 aaPredicted RBP10.88□□□□□ -0.67
DDX39B-216ENST00000462421 DNAJC2Q99543 621 aaKnown RBP10.88□□□□□ -0.67
DDX39B-216ENST00000462421 IL1RAPL2Q9NP60 686 aa10.88□□□□□ -0.67
DDX39B-216ENST00000462421 SNRKQ9NRH2 765 aa10.88□□□□□ -0.67
DDX39B-216ENST00000462421 ZBTB40Q9NUA8 1239 aa10.88□□□□□ -0.67
DDX39B-216ENST00000462421 RNF186Q9NXI6 227 aa10.88□□□□□ -0.67
DDX39B-216ENST00000462421 USP2O75604 605 aaPredicted RBP10.87□□□□□ -0.67
DDX39B-216ENST00000462421 CETPP11597 493 aa10.87□□□□□ -0.67
DDX39B-216ENST00000462421 CYP7A1P22680 504 aa10.87□□□□□ -0.67
DDX39B-216ENST00000462421 MCAMP43121 646 aa10.87□□□□□ -0.67
DDX39B-216ENST00000462421 RRP1P56182 461 aaKnown RBP10.87□□□□□ -0.67
DDX39B-216ENST00000462421 SNAPC2Q13487 334 aa10.87□□□□□ -0.67
DDX39B-216ENST00000462421 GRIK5Q16478 980 aa10.87□□□□□ -0.67
DDX39B-216ENST00000462421 ZSCAN25Q6NSZ9 544 aa10.87□□□□□ -0.67
DDX39B-216ENST00000462421 MIGA2Q7L4E1 593 aa10.87□□□□□ -0.67
DDX39B-216ENST00000462421 ERO1BQ86YB8 467 aa10.87□□□□□ -0.67
DDX39B-216ENST00000462421 GAKO14976 1311 aa10.86□□□□□ -0.67
DDX39B-216ENST00000462421 MYH13Q9UKX3 1938 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms