RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 SALL1Q9NSC2 1324 aa19.19■□□□□ 0.66
NUP50-213ENST00000461437 MANSC4A6NHS7 340 aaPredicted RBP19.18■□□□□ 0.66
NUP50-213ENST00000461437 GPR25O00155 361 aa19.18■□□□□ 0.66
NUP50-213ENST00000461437 SEMA3EO15041 775 aa19.18■□□□□ 0.66
NUP50-213ENST00000461437 ZBTB48P10074 688 aaPredicted RBP19.18■□□□□ 0.66
NUP50-213ENST00000461437 IFNL1Q8IU54 200 aa19.18■□□□□ 0.66
NUP50-213ENST00000461437 ZFPM1Q8IX07 1006 aa19.18■□□□□ 0.66
NUP50-213ENST00000461437 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.18■□□□□ 0.66
NUP50-213ENST00000461437 AKAP2Q9Y2D5 859 aa19.18■□□□□ 0.66
NUP50-213ENST00000461437 MAP3K9P80192 1104 aa19.17■□□□□ 0.66
NUP50-213ENST00000461437 POLA2Q14181 598 aa19.17■□□□□ 0.66
NUP50-213ENST00000461437 TBC1D9Q6ZT07 1266 aa19.17■□□□□ 0.66
NUP50-213ENST00000461437 FAM83AQ86UY5 434 aa19.17■□□□□ 0.66
NUP50-213ENST00000461437 ZKSCAN4Q969J2 545 aaPredicted RBP19.17■□□□□ 0.66
NUP50-213ENST00000461437 PTPN18Q99952 460 aa19.17■□□□□ 0.66
NUP50-213ENST00000461437 USP40Q9NVE5 1235 aa19.17■□□□□ 0.66
NUP50-213ENST00000461437 ZBTB7BO15156 539 aaPredicted RBP19.16■□□□□ 0.66
NUP50-213ENST00000461437 SLURP2P0DP57 97 aa19.16■□□□□ 0.66
NUP50-213ENST00000461437 RGS19P49795 217 aa19.16■□□□□ 0.66
NUP50-213ENST00000461437 ATP8B2P98198 1209 aa19.16■□□□□ 0.66
NUP50-213ENST00000461437 MVPQ14764 893 aaKnown RBP19.16■□□□□ 0.66
NUP50-213ENST00000461437 CTU1Q7Z7A3 348 aaKnown RBP19.16■□□□□ 0.66
NUP50-213ENST00000461437 DZIP1Q86YF9 867 aaKnown RBP19.16■□□□□ 0.66
NUP50-213ENST00000461437 OTUD5Q96G74 571 aa19.16■□□□□ 0.66
NUP50-213ENST00000461437 WRNIP1Q96S55 665 aa19.16■□□□□ 0.66
NUP50-213ENST00000461437 HMG20BQ9P0W2 317 aa19.16■□□□□ 0.66
NUP50-213ENST00000461437 FAM198AQ9UFP1 575 aa19.16■□□□□ 0.66
NUP50-213ENST00000461437 SNCAIPQ9Y6H5 919 aa19.16■□□□□ 0.66
NUP50-213ENST00000461437 MLLT1Q03111 559 aaPredicted RBP19.15■□□□□ 0.66
NUP50-213ENST00000461437 OS9Q13438 667 aaPredicted RBP19.15■□□□□ 0.66
NUP50-213ENST00000461437 GORABQ5T7V8 394 aa19.15■□□□□ 0.66
NUP50-213ENST00000461437 SSH3Q8TE77 659 aa19.15■□□□□ 0.66
NUP50-213ENST00000461437 ZNF384Q8TF68 577 aa19.15■□□□□ 0.66
NUP50-213ENST00000461437 ZSWIM8A7E2V4 1837 aa19.15■□□□□ 0.66
NUP50-213ENST00000461437 SURF6O75683 361 aaKnown RBP19.14■□□□□ 0.65
NUP50-213ENST00000461437 INPP5BP32019 993 aa19.14■□□□□ 0.65
NUP50-213ENST00000461437 FKBP1CQ5VVH2 108 aa19.14■□□□□ 0.65
NUP50-213ENST00000461437 FAM151AQ8WW52 585 aa19.14■□□□□ 0.65
NUP50-213ENST00000461437 DBNDD2Q9BQY9 259 aa19.14■□□□□ 0.65
NUP50-213ENST00000461437 SNRKQ9NRH2 765 aa19.14■□□□□ 0.65
NUP50-213ENST00000461437 CSADQ9Y600 493 aa19.14■□□□□ 0.65
NUP50-213ENST00000461437 RPAP1Q9BWH6 1393 aaPredicted RBP19.14■□□□□ 0.65
NUP50-213ENST00000461437 CDK5RAP2Q96SN8 1893 aa19.14■□□□□ 0.65
NUP50-213ENST00000461437 UNCXA6NJT0 531 aa19.13■□□□□ 0.65
NUP50-213ENST00000461437 MCAMP43121 646 aa19.13■□□□□ 0.65
NUP50-213ENST00000461437 BTDP43251 543 aa19.13■□□□□ 0.65
NUP50-213ENST00000461437 RGS3P49796 1198 aa19.13■□□□□ 0.65
NUP50-213ENST00000461437 MECOMQ03112 1051 aa19.13■□□□□ 0.65
NUP50-213ENST00000461437 TNNI3KQ59H18 835 aa19.13■□□□□ 0.65
NUP50-213ENST00000461437 BRI3BPQ8WY22 251 aa19.13■□□□□ 0.65
NUP50-213ENST00000461437 MS4A4AQ96JQ5 239 aa19.13■□□□□ 0.65
NUP50-213ENST00000461437 FPGT-TNNI3KV9GXZ4 949 aa19.13■□□□□ 0.65
NUP50-213ENST00000461437 GAKO14976 1311 aa19.13■□□□□ 0.65
NUP50-213ENST00000461437 MAST2Q6P0Q8 1798 aa19.12■□□□□ 0.65
NUP50-213ENST00000461437 CCL15-CCL14A0A0B4J2E2 113 aa19.12■□□□□ 0.65
NUP50-213ENST00000461437 FKTNO75072 461 aa19.12■□□□□ 0.65
NUP50-213ENST00000461437 ARID4AP29374 1257 aaPredicted RBP19.12■□□□□ 0.65
NUP50-213ENST00000461437 CRHR2Q13324 411 aa19.12■□□□□ 0.65
NUP50-213ENST00000461437 PICALMQ13492 652 aa19.12■□□□□ 0.65
NUP50-213ENST00000461437 CCL15Q16663 113 aa19.12■□□□□ 0.65
NUP50-213ENST00000461437 ERICH6Q7L0X2 663 aa19.12■□□□□ 0.65
NUP50-213ENST00000461437 ZGPATQ8N5A5 531 aaKnown RBP19.12■□□□□ 0.65
NUP50-213ENST00000461437 SPATA5Q8NB90 893 aa19.12■□□□□ 0.65
NUP50-213ENST00000461437 DDX4Q9NQI0 724 aaKnown RBP19.12■□□□□ 0.65
NUP50-213ENST00000461437 TLR7Q9NYK1 1049 aaKnown RBP19.12■□□□□ 0.65
NUP50-213ENST00000461437 RFX7Q2KHR2 1363 aa19.11■□□□□ 0.65
NUP50-213ENST00000461437 MROH7-TTC4A0A0A0MT08 1334 aa19.11■□□□□ 0.65
NUP50-213ENST00000461437 PDS5AQ29RF7 1337 aaKnown RBP19.11■□□□□ 0.65
NUP50-213ENST00000461437 SOX10P56693 466 aa19.11■□□□□ 0.65
NUP50-213ENST00000461437 INHBEP58166 350 aa19.11■□□□□ 0.65
NUP50-213ENST00000461437 CEP85Q6P2H3 762 aa19.11■□□□□ 0.65
NUP50-213ENST00000461437 SH3BP5LQ7L8J4 393 aa19.11■□□□□ 0.65
NUP50-213ENST00000461437 CFHR5Q9BXR6 569 aa19.11■□□□□ 0.65
NUP50-213ENST00000461437 ZNF341Q9BYN7 854 aa19.11■□□□□ 0.65
NUP50-213ENST00000461437 SPDYE5A6NIY4 337 aa19.1■□□□□ 0.65
NUP50-213ENST00000461437 ALDH1A1P00352 501 aa19.1■□□□□ 0.65
NUP50-213ENST00000461437 CAP1Q01518 475 aa19.1■□□□□ 0.65
NUP50-213ENST00000461437 DCAF15Q66K64 600 aa19.1■□□□□ 0.65
NUP50-213ENST00000461437 FAM43AQ8N2R8 423 aa19.1■□□□□ 0.65
NUP50-213ENST00000461437 CCDC8Q9H0W5 538 aaPredicted RBP19.1■□□□□ 0.65
NUP50-213ENST00000461437 RAI14Q9P0K7 980 aa19.1■□□□□ 0.65
NUP50-213ENST00000461437 EXOC6BQ9Y2D4 811 aa19.1■□□□□ 0.65
NUP50-213ENST00000461437 TESPA1A2RU30 521 aaPredicted RBP19.09■□□□□ 0.65
NUP50-213ENST00000461437 IRF6O14896 467 aa19.09■□□□□ 0.65
NUP50-213ENST00000461437 ZBTB22O15209 634 aa19.09■□□□□ 0.65
NUP50-213ENST00000461437 WDHD1O75717 1129 aaPredicted RBP19.09■□□□□ 0.65
NUP50-213ENST00000461437 TTC39AQ5SRH9 613 aa19.09■□□□□ 0.65
NUP50-213ENST00000461437 SPTY2D1Q68D10 685 aaPredicted RBP19.09■□□□□ 0.65
NUP50-213ENST00000461437 NSUN4Q96CB9 384 aaKnown RBP19.09■□□□□ 0.65
NUP50-213ENST00000461437 HPS5Q9UPZ3 1129 aa19.09■□□□□ 0.65
NUP50-213ENST00000461437 COG6Q9Y2V7 657 aa19.09■□□□□ 0.65
NUP50-213ENST00000461437 DOCK1Q14185 1865 aa19.09■□□□□ 0.65
NUP50-213ENST00000461437 DDTLA6NHG4 134 aaPredicted RBP19.08■□□□□ 0.64
NUP50-213ENST00000461437 ERO1BQ86YB8 467 aa19.08■□□□□ 0.64
NUP50-213ENST00000461437 ZSCAN29Q8IWY8 852 aaPredicted RBP19.08■□□□□ 0.64
NUP50-213ENST00000461437 CD99L2Q8TCZ2 262 aa19.08■□□□□ 0.64
NUP50-213ENST00000461437 DBNLQ9UJU6 430 aaKnown RBP19.08■□□□□ 0.64
NUP50-213ENST00000461437 NDUFB9Q9Y6M9 179 aa19.08■□□□□ 0.64
NUP50-213ENST00000461437 PHIPQ8WWQ0 1821 aa19.08■□□□□ 0.64
NUP50-213ENST00000461437 ATAD5Q96QE3 1844 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms