RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 PSMD1Q99460 953 aa9.13□□□□□ -0.95
RTN4-212ENST00000461004 RTFDC1Q9BY42 306 aaPredicted RBP9.13□□□□□ -0.95
RTN4-212ENST00000461004 IL21Q9HBE4 155 aa9.13□□□□□ -0.95
RTN4-212ENST00000461004 PRDM9Q9NQV7 894 aa9.13□□□□□ -0.95
RTN4-212ENST00000461004 PA2G4Q9UQ80 394 aaKnown RBP9.13□□□□□ -0.95
RTN4-212ENST00000461004 CCDC88AQ3V6T2 1871 aa9.13□□□□□ -0.95
RTN4-212ENST00000461004 DUOX1Q9NRD9 1551 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 CHD4Q14839 1912 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 PNMA6EA0A0J9YXQ4 647 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 SPDYE5A6NIY4 337 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 PPIP5K2O43314 1243 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 GNAI2P04899 355 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 GNAI3P08754 354 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 KLRK1P26718 216 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 RRP1P56182 461 aaKnown RBP9.12□□□□□ -0.95
RTN4-212ENST00000461004 PTPN12Q05209 780 aaKnown RBP9.12□□□□□ -0.95
RTN4-212ENST00000461004 CHRNDQ07001 517 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 MCM6Q14566 821 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 MVPQ14764 893 aaKnown RBP9.12□□□□□ -0.95
RTN4-212ENST00000461004 TAF7LQ5H9L4 462 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 LDHAL6AQ6ZMR3 332 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 TMC4Q7Z404 712 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 TXNRD3Q86VQ6 643 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 MPHOSPH8Q99549 860 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 SPSB2Q99619 263 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 TMX4Q9H1E5 349 aaPredicted RBP9.12□□□□□ -0.95
RTN4-212ENST00000461004 KCNQ5Q9NR82 932 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 ANKIB1Q9P2G1 1089 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 RIPOR2Q9Y4F9 1068 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 SPEF2Q9C093 1822 aa9.12□□□□□ -0.95
RTN4-212ENST00000461004 ZNF541Q9H0D2 1346 aa9.11□□□□□ -0.95
RTN4-212ENST00000461004 UFL1O94874 794 aa9.11□□□□□ -0.95
RTN4-212ENST00000461004 TMEM259Q4ZIN3 620 aa9.11□□□□□ -0.95
RTN4-212ENST00000461004 LARGE2Q8N3Y3 721 aa9.11□□□□□ -0.95
RTN4-212ENST00000461004 ZNF784Q8NCA9 323 aaPredicted RBP9.11□□□□□ -0.95
RTN4-212ENST00000461004 SIL1Q9H173 461 aa9.11□□□□□ -0.95
RTN4-212ENST00000461004 CNNM1Q9NRU3 951 aa9.11□□□□□ -0.95
RTN4-212ENST00000461004 PODXL2Q9NZ53 605 aa9.11□□□□□ -0.95
RTN4-212ENST00000461004 GGA1Q9UJY5 639 aa9.11□□□□□ -0.95
RTN4-212ENST00000461004 SUPT16HQ9Y5B9 1047 aaKnown RBP9.11□□□□□ -0.95
RTN4-212ENST00000461004 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.11□□□□□ -0.95
RTN4-212ENST00000461004 LRRC37AA6NMS7 1700 aa9.11□□□□□ -0.95
RTN4-212ENST00000461004 XDHP47989 1333 aa9.1□□□□□ -0.95
RTN4-212ENST00000461004 YDJCA8MPS7 323 aa9.1□□□□□ -0.95
RTN4-212ENST00000461004 SRGAP3O43295 1099 aa9.1□□□□□ -0.95
RTN4-212ENST00000461004 DDNO94850 711 aaPredicted RBP9.1□□□□□ -0.95
RTN4-212ENST00000461004 ITGBL1O95965 494 aaPredicted RBP9.1□□□□□ -0.95
RTN4-212ENST00000461004 USP17L8P0C7I0 530 aa9.1□□□□□ -0.95
RTN4-212ENST00000461004 ATP8B2P98198 1209 aa9.1□□□□□ -0.95
RTN4-212ENST00000461004 KIAA2012Q0VF49 1180 aa9.1□□□□□ -0.95
RTN4-212ENST00000461004 PDE3AQ14432 1141 aa9.1□□□□□ -0.95
RTN4-212ENST00000461004 WASHC4Q2M389 1173 aa9.1□□□□□ -0.95
RTN4-212ENST00000461004 ATG9AQ7Z3C6 839 aa9.1□□□□□ -0.95
RTN4-212ENST00000461004 MTMR14Q8NCE2 650 aa9.1□□□□□ -0.95
RTN4-212ENST00000461004 BANK1Q8NDB2 785 aa9.1□□□□□ -0.95
RTN4-212ENST00000461004 LRRN4Q8WUT4 740 aa9.1□□□□□ -0.95
RTN4-212ENST00000461004 CRBNQ96SW2 442 aa9.1□□□□□ -0.95
RTN4-212ENST00000461004 DBNDD1Q9H9R9 158 aa9.1□□□□□ -0.95
RTN4-212ENST00000461004 HMX1Q9NP08 348 aaPredicted RBP9.1□□□□□ -0.95
RTN4-212ENST00000461004 LTBP1Q14766 1721 aa9.1□□□□□ -0.95
RTN4-212ENST00000461004 IRS2Q9Y4H2 1338 aa9.09□□□□□ -0.95
RTN4-212ENST00000461004 FZD9O00144 591 aa9.09□□□□□ -0.95
RTN4-212ENST00000461004 EYA2O00167 538 aa9.09□□□□□ -0.95
RTN4-212ENST00000461004 ADH1BP00325 375 aa9.09□□□□□ -0.95
RTN4-212ENST00000461004 ATP2B4P23634 1241 aa9.09□□□□□ -0.95
RTN4-212ENST00000461004 MTX1Q13505 466 aa9.09□□□□□ -0.95
RTN4-212ENST00000461004 MSS51Q4VC12 460 aa9.09□□□□□ -0.95
RTN4-212ENST00000461004 CEP85Q6P2H3 762 aa9.09□□□□□ -0.95
RTN4-212ENST00000461004 SIRT2Q8IXJ6 389 aa9.09□□□□□ -0.95
RTN4-212ENST00000461004 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.09□□□□□ -0.95
RTN4-212ENST00000461004 TSC1Q92574 1164 aa9.09□□□□□ -0.95
RTN4-212ENST00000461004 NMRK2Q9NPI5 230 aa9.09□□□□□ -0.95
RTN4-212ENST00000461004 ZBTB40Q9NUA8 1239 aa9.09□□□□□ -0.95
RTN4-212ENST00000461004 ZNF804BA4D1E1 1349 aa9.08□□□□□ -0.96
RTN4-212ENST00000461004 POTECB2RU33 542 aa9.08□□□□□ -0.96
RTN4-212ENST00000461004 RAD17O75943 681 aa9.08□□□□□ -0.96
RTN4-212ENST00000461004 METTL24Q5JXM2 366 aa9.08□□□□□ -0.96
RTN4-212ENST00000461004 NIM1KQ8IY84 436 aa9.08□□□□□ -0.96
RTN4-212ENST00000461004 VGLL2Q8N8G2 317 aa9.08□□□□□ -0.96
RTN4-212ENST00000461004 SUPT20HQ8NEM7 779 aa9.08□□□□□ -0.96
RTN4-212ENST00000461004 ZC3H12CQ9C0D7 883 aaKnown RBP9.08□□□□□ -0.96
RTN4-212ENST00000461004 ANKRD2Q9GZV1 360 aa9.08□□□□□ -0.96
RTN4-212ENST00000461004 RRAGCQ9HB90 399 aa9.08□□□□□ -0.96
RTN4-212ENST00000461004 COPRSQ9NQ92 184 aa9.08□□□□□ -0.96
RTN4-212ENST00000461004 DDX19BQ9UMR2 479 aa9.08□□□□□ -0.96
RTN4-212ENST00000461004 SHTN1A0MZ66 631 aa9.07□□□□□ -0.96
RTN4-212ENST00000461004 GLTPD2A6NH11 291 aa9.07□□□□□ -0.96
RTN4-212ENST00000461004 ECE2O60344 883 aa9.07□□□□□ -0.96
RTN4-212ENST00000461004 DXOO77932 396 aaKnown RBP9.07□□□□□ -0.96
RTN4-212ENST00000461004 JUNDP17535 347 aa9.07□□□□□ -0.96
RTN4-212ENST00000461004 KCNJ4P48050 445 aa9.07□□□□□ -0.96
RTN4-212ENST00000461004 IRX6P78412 446 aaPredicted RBP9.07□□□□□ -0.96
RTN4-212ENST00000461004 CXCL9Q07325 125 aa9.07□□□□□ -0.96
RTN4-212ENST00000461004 DESI1Q6ICB0 168 aa9.07□□□□□ -0.96
RTN4-212ENST00000461004 SSH3Q8TE77 659 aa9.07□□□□□ -0.96
RTN4-212ENST00000461004 JDP2Q8WYK2 163 aa9.07□□□□□ -0.96
RTN4-212ENST00000461004 MXD3Q9BW11 206 aa9.07□□□□□ -0.96
RTN4-212ENST00000461004 ZNRF3Q9ULT6 936 aa9.07□□□□□ -0.96
RTN4-212ENST00000461004 HDAC5Q9UQL6 1122 aa9.07□□□□□ -0.96
RTN4-212ENST00000461004 LEMD3Q9Y2U8 911 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms