RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 COLQQ9Y215 455 aaPredicted RBP18.3■□□□□ 0.52
NCK1-202ENST00000460960 CETPP11597 493 aa18.29■□□□□ 0.52
NCK1-202ENST00000460960 RRP1P56182 461 aaKnown RBP18.29■□□□□ 0.52
NCK1-202ENST00000460960 COG6Q9Y2V7 657 aa18.29■□□□□ 0.52
NCK1-202ENST00000460960 LRRFIP2Q9Y608 721 aaKnown RBP18.29■□□□□ 0.52
NCK1-202ENST00000460960 SPDYE5A6NIY4 337 aa18.28■□□□□ 0.52
NCK1-202ENST00000460960 UBTFL1P0CB47 393 aaPredicted RBP18.28■□□□□ 0.52
NCK1-202ENST00000460960 TEKT1Q969V4 418 aa18.28■□□□□ 0.52
NCK1-202ENST00000460960 BRCA2P51587 3418 aa18.27■□□□□ 0.52
NCK1-202ENST00000460960 BTBD19C9JJ37 291 aa18.27■□□□□ 0.52
NCK1-202ENST00000460960 TLR2O60603 784 aa18.27■□□□□ 0.52
NCK1-202ENST00000460960 LACTBP83111 547 aaPredicted RBP18.27■□□□□ 0.52
NCK1-202ENST00000460960 SNAPC2Q13487 334 aa18.27■□□□□ 0.52
NCK1-202ENST00000460960 RABL6Q3YEC7 729 aaPredicted RBP18.27■□□□□ 0.52
NCK1-202ENST00000460960 CAVIN4Q5BKX8 364 aa18.27■□□□□ 0.52
NCK1-202ENST00000460960 METTL24Q5JXM2 366 aa18.27■□□□□ 0.52
NCK1-202ENST00000460960 ERO1BQ86YB8 467 aa18.27■□□□□ 0.52
NCK1-202ENST00000460960 ZKSCAN4Q969J2 545 aaPredicted RBP18.27■□□□□ 0.52
NCK1-202ENST00000460960 C1orf115Q9H7X2 142 aa18.27■□□□□ 0.52
NCK1-202ENST00000460960 SNCAIPQ9Y6H5 919 aa18.27■□□□□ 0.52
NCK1-202ENST00000460960 MROH5Q6ZUA9 1318 aa18.26■□□□□ 0.51
NCK1-202ENST00000460960 H0YGN5 161 aa18.26■□□□□ 0.51
NCK1-202ENST00000460960 ZBTB7BO15156 539 aaPredicted RBP18.26■□□□□ 0.51
NCK1-202ENST00000460960 TBC1D22AQ8WUA7 517 aa18.26■□□□□ 0.51
NCK1-202ENST00000460960 CEP290O15078 2479 aa18.25■□□□□ 0.51
NCK1-202ENST00000460960 IRF6O14896 467 aa18.25■□□□□ 0.51
NCK1-202ENST00000460960 MVPQ14764 893 aaKnown RBP18.25■□□□□ 0.51
NCK1-202ENST00000460960 KLHDC4Q8TBB5 520 aa18.25■□□□□ 0.51
NCK1-202ENST00000460960 HOOK2Q96ED9 719 aa18.25■□□□□ 0.51
NCK1-202ENST00000460960 LRRC24Q50LG9 513 aa18.24■□□□□ 0.51
NCK1-202ENST00000460960 DCAF15Q66K64 600 aa18.24■□□□□ 0.51
NCK1-202ENST00000460960 MIGA2Q7L4E1 593 aa18.24■□□□□ 0.51
NCK1-202ENST00000460960 FBXO33Q7Z6M2 555 aa18.24■□□□□ 0.51
NCK1-202ENST00000460960 CPA4Q9UI42 421 aa18.24■□□□□ 0.51
NCK1-202ENST00000460960 RIPOR2Q9Y4F9 1068 aa18.24■□□□□ 0.51
NCK1-202ENST00000460960 AK9Q5TCS8 1911 aa18.23■□□□□ 0.51
NCK1-202ENST00000460960 TRIOBPQ9H2D6 2365 aa18.23■□□□□ 0.51
NCK1-202ENST00000460960 GNAI3P08754 354 aa18.23■□□□□ 0.51
NCK1-202ENST00000460960 HDLBPQ00341 1268 aaKnown RBP18.23■□□□□ 0.51
NCK1-202ENST00000460960 PPIL2Q13356 520 aa18.23■□□□□ 0.51
NCK1-202ENST00000460960 PDE3AQ14432 1141 aa18.23■□□□□ 0.51
NCK1-202ENST00000460960 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.23■□□□□ 0.51
NCK1-202ENST00000460960 DPF3Q92784 378 aa18.23■□□□□ 0.51
NCK1-202ENST00000460960 SUPT16HQ9Y5B9 1047 aaKnown RBP18.23■□□□□ 0.51
NCK1-202ENST00000460960 PSMC4P43686 418 aa18.22■□□□□ 0.51
NCK1-202ENST00000460960 RFX5P48382 616 aaPredicted RBP18.22■□□□□ 0.51
NCK1-202ENST00000460960 BCAMP50895 628 aa18.22■□□□□ 0.51
NCK1-202ENST00000460960 MTFR1Q15390 333 aa18.22■□□□□ 0.51
NCK1-202ENST00000460960 CHRDL2Q6WN34 429 aa18.22■□□□□ 0.51
NCK1-202ENST00000460960 FAM83AQ86UY5 434 aa18.22■□□□□ 0.51
NCK1-202ENST00000460960 RAET1EQ8TD07 263 aa18.22■□□□□ 0.51
NCK1-202ENST00000460960 ZDHHC15Q96MV8 337 aa18.22■□□□□ 0.51
NCK1-202ENST00000460960 ZNF341Q9BYN7 854 aa18.22■□□□□ 0.51
NCK1-202ENST00000460960 ZCCHC17Q9NP64 241 aaKnown RBP18.22■□□□□ 0.51
NCK1-202ENST00000460960 BIN2Q9UBW5 565 aaPredicted RBP18.22■□□□□ 0.51
NCK1-202ENST00000460960 MAST3O60307 1309 aa18.22■□□□□ 0.51
NCK1-202ENST00000460960 FMNL1O95466 1100 aaPredicted RBP18.21■□□□□ 0.51
NCK1-202ENST00000460960 GNRH1P01148 92 aa18.21■□□□□ 0.51
NCK1-202ENST00000460960 GNAI2P04899 355 aa18.21■□□□□ 0.51
NCK1-202ENST00000460960 INPP5BP32019 993 aa18.21■□□□□ 0.51
NCK1-202ENST00000460960 PRMT2P55345 433 aa18.21■□□□□ 0.51
NCK1-202ENST00000460960 PNMA6EA0A0J9YXQ4 647 aa18.2■□□□□ 0.5
NCK1-202ENST00000460960 MS4A1P11836 297 aa18.2■□□□□ 0.5
NCK1-202ENST00000460960 TCP10Q12799 353 aa18.2■□□□□ 0.5
NCK1-202ENST00000460960 APOBEC3HQ6NTF7 200 aaKnown RBP18.2■□□□□ 0.5
NCK1-202ENST00000460960 MYH13Q9UKX3 1938 aa18.19■□□□□ 0.5
NCK1-202ENST00000460960 PDHXO00330 501 aa18.19■□□□□ 0.5
NCK1-202ENST00000460960 PDE8BO95263 885 aa18.19■□□□□ 0.5
NCK1-202ENST00000460960 HOXD10P28358 340 aa18.19■□□□□ 0.5
NCK1-202ENST00000460960 PPATQ06203 517 aa18.19■□□□□ 0.5
NCK1-202ENST00000460960 TRIM47Q96LD4 638 aa18.19■□□□□ 0.5
NCK1-202ENST00000460960 CRBNQ96SW2 442 aa18.19■□□□□ 0.5
NCK1-202ENST00000460960 ZBTB40Q9NUA8 1239 aa18.19■□□□□ 0.5
NCK1-202ENST00000460960 SRRDQ9UH36 339 aa18.19■□□□□ 0.5
NCK1-202ENST00000460960 PA2G4Q9UQ80 394 aaKnown RBP18.19■□□□□ 0.5
NCK1-202ENST00000460960 IFIT1P09914 478 aaKnown RBP18.18■□□□□ 0.5
NCK1-202ENST00000460960 OSBPP22059 807 aa18.18■□□□□ 0.5
NCK1-202ENST00000460960 CTGFP29279 349 aa18.18■□□□□ 0.5
NCK1-202ENST00000460960 GRK4P32298 578 aa18.18■□□□□ 0.5
NCK1-202ENST00000460960 FKBP1CQ5VVH2 108 aa18.18■□□□□ 0.5
NCK1-202ENST00000460960 C17orf99Q6UX52 265 aa18.18■□□□□ 0.5
NCK1-202ENST00000460960 SHISA4Q96DD7 197 aa18.18■□□□□ 0.5
NCK1-202ENST00000460960 MYPNQ86TC9 1320 aa18.18■□□□□ 0.5
NCK1-202ENST00000460960 RPAP1Q9BWH6 1393 aaPredicted RBP18.17■□□□□ 0.5
NCK1-202ENST00000460960 MTX1Q13505 466 aa18.17■□□□□ 0.5
NCK1-202ENST00000460960 HHIPL2Q6UWX4 724 aa18.17■□□□□ 0.5
NCK1-202ENST00000460960 ANKRD23Q86SG2 305 aa18.17■□□□□ 0.5
NCK1-202ENST00000460960 VGLL2Q8N8G2 317 aa18.17■□□□□ 0.5
NCK1-202ENST00000460960 DDX19BQ9UMR2 479 aa18.17■□□□□ 0.5
NCK1-202ENST00000460960 SUGT1Q9Y2Z0 365 aa18.17■□□□□ 0.5
NCK1-202ENST00000460960 SRGAP3O43295 1099 aa18.16■□□□□ 0.5
NCK1-202ENST00000460960 CCL5P13501 91 aa18.16■□□□□ 0.5
NCK1-202ENST00000460960 PUM3Q15397 648 aaKnown RBP18.16■□□□□ 0.5
NCK1-202ENST00000460960 NKX2-3Q8TAU0 364 aa18.16■□□□□ 0.5
NCK1-202ENST00000460960 MRIQ9BWK5 157 aa18.16■□□□□ 0.5
NCK1-202ENST00000460960 RNF208Q9H0X6 261 aa18.16■□□□□ 0.5
NCK1-202ENST00000460960 SLC5A1P13866 664 aa18.15■□□□□ 0.5
NCK1-202ENST00000460960 UBXN2AP68543 259 aa18.15■□□□□ 0.5
NCK1-202ENST00000460960 IRX6P78412 446 aaPredicted RBP18.15■□□□□ 0.5
NCK1-202ENST00000460960 CEP85Q6P2H3 762 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms