RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 PPIL2Q13356 520 aa15.43■□□□□ 0.06
GPNMB-204ENST00000459927 DCAF15Q66K64 600 aa15.43■□□□□ 0.06
GPNMB-204ENST00000459927 ZNF341Q9BYN7 854 aa15.43■□□□□ 0.06
GPNMB-204ENST00000459927 INPP5BP32019 993 aa15.42■□□□□ 0.06
GPNMB-204ENST00000459927 LACTBP83111 547 aaPredicted RBP15.42■□□□□ 0.06
GPNMB-204ENST00000459927 KIF22Q14807 665 aa15.42■□□□□ 0.06
GPNMB-204ENST00000459927 ALDH1L2Q3SY69 923 aa15.42■□□□□ 0.06
GPNMB-204ENST00000459927 SLC9C1Q4G0N8 1177 aa15.42■□□□□ 0.06
GPNMB-204ENST00000459927 HABP4Q5JVS0 413 aaKnown RBP15.42■□□□□ 0.06
GPNMB-204ENST00000459927 CDC42EP5Q6NZY7 148 aa15.42■□□□□ 0.06
GPNMB-204ENST00000459927 C17orf99Q6UX52 265 aa15.42■□□□□ 0.06
GPNMB-204ENST00000459927 ARHGAP39Q9C0H5 1083 aa15.42■□□□□ 0.06
GPNMB-204ENST00000459927 CEP126Q9P2H0 1117 aa15.42■□□□□ 0.06
GPNMB-204ENST00000459927 OTOFQ9HC10 1997 aa15.42■□□□□ 0.06
GPNMB-204ENST00000459927 HTTP42858 3142 aa15.41■□□□□ 0.06
GPNMB-204ENST00000459927 GNRH1P01148 92 aa15.41■□□□□ 0.06
GPNMB-204ENST00000459927 TCP10Q12799 353 aa15.41■□□□□ 0.06
GPNMB-204ENST00000459927 CDCA7LQ96GN5 454 aa15.41■□□□□ 0.06
GPNMB-204ENST00000459927 FBXO3Q9UK99 471 aa15.41■□□□□ 0.06
GPNMB-204ENST00000459927 MKI67P46013 3256 aaKnown RBP15.41■□□□□ 0.06
GPNMB-204ENST00000459927 DIXDC1Q155Q3 683 aa15.4■□□□□ 0.06
GPNMB-204ENST00000459927 SLC4A8Q2Y0W8 1093 aa15.4■□□□□ 0.06
GPNMB-204ENST00000459927 TRMT2AQ8IZ69 625 aaKnown RBP15.4■□□□□ 0.06
GPNMB-204ENST00000459927 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.4■□□□□ 0.06
GPNMB-204ENST00000459927 USP40Q9NVE5 1235 aa15.4■□□□□ 0.06
GPNMB-204ENST00000459927 GNL3LQ9NVN8 582 aaKnown RBP15.4■□□□□ 0.06
GPNMB-204ENST00000459927 DAGLAQ9Y4D2 1042 aa15.4■□□□□ 0.06
GPNMB-204ENST00000459927 CIAO1O76071 339 aa15.39■□□□□ 0.05
GPNMB-204ENST00000459927 PRMT2P55345 433 aa15.39■□□□□ 0.05
GPNMB-204ENST00000459927 NFIAQ12857 509 aa15.39■□□□□ 0.05
GPNMB-204ENST00000459927 ANKRD23Q86SG2 305 aa15.39■□□□□ 0.05
GPNMB-204ENST00000459927 ZFPM1Q8IX07 1006 aa15.39■□□□□ 0.05
GPNMB-204ENST00000459927 FAM198AQ9UFP1 575 aa15.39■□□□□ 0.05
GPNMB-204ENST00000459927 KCNH4Q9UQ05 1017 aa15.39■□□□□ 0.05
GPNMB-204ENST00000459927 ARAP2Q8WZ64 1704 aa15.38■□□□□ 0.05
GPNMB-204ENST00000459927 PDHXO00330 501 aa15.38■□□□□ 0.05
GPNMB-204ENST00000459927 MYCP01106 439 aaPredicted RBP15.38■□□□□ 0.05
GPNMB-204ENST00000459927 LDHBP07195 334 aaKnown RBP15.38■□□□□ 0.05
GPNMB-204ENST00000459927 CTGFP29279 349 aa15.38■□□□□ 0.05
GPNMB-204ENST00000459927 PRDX5P30044 214 aa15.38■□□□□ 0.05
GPNMB-204ENST00000459927 MOGSQ13724 837 aa15.38■□□□□ 0.05
GPNMB-204ENST00000459927 ATP2B3Q16720 1220 aa15.38■□□□□ 0.05
GPNMB-204ENST00000459927 SH3TC2Q8TF17 1288 aa15.38■□□□□ 0.05
GPNMB-204ENST00000459927 SIL1Q9H173 461 aa15.38■□□□□ 0.05
GPNMB-204ENST00000459927 CPA4Q9UI42 421 aa15.38■□□□□ 0.05
GPNMB-204ENST00000459927 DENND2AQ9ULE3 1009 aa15.38■□□□□ 0.05
GPNMB-204ENST00000459927 NOB1Q9ULX3 412 aaKnown RBP15.38■□□□□ 0.05
GPNMB-204ENST00000459927 CXCL11O14625 94 aa15.37■□□□□ 0.05
GPNMB-204ENST00000459927 ZBTB22O15209 634 aa15.37■□□□□ 0.05
GPNMB-204ENST00000459927 UBTFL1P0CB47 393 aaPredicted RBP15.37■□□□□ 0.05
GPNMB-204ENST00000459927 HOXD10P28358 340 aa15.37■□□□□ 0.05
GPNMB-204ENST00000459927 PSMC4P43686 418 aa15.37■□□□□ 0.05
GPNMB-204ENST00000459927 SALL1Q9NSC2 1324 aa15.37■□□□□ 0.05
GPNMB-204ENST00000459927 AK9Q5TCS8 1911 aa15.37■□□□□ 0.05
GPNMB-204ENST00000459927 RPAP1Q9BWH6 1393 aaPredicted RBP15.36■□□□□ 0.05
GPNMB-204ENST00000459927 PHF20L1A8MW92 1017 aa15.36■□□□□ 0.05
GPNMB-204ENST00000459927 SEMA3EO15041 775 aa15.36■□□□□ 0.05
GPNMB-204ENST00000459927 ECM2O94769 699 aaPredicted RBP15.36■□□□□ 0.05
GPNMB-204ENST00000459927 IL15P40933 162 aaPredicted RBP15.36■□□□□ 0.05
GPNMB-204ENST00000459927 PHKA1P46020 1223 aa15.36■□□□□ 0.05
GPNMB-204ENST00000459927 TIMM10P62072 90 aa15.36■□□□□ 0.05
GPNMB-204ENST00000459927 MAP3K10Q02779 954 aa15.36■□□□□ 0.05
GPNMB-204ENST00000459927 NOL9Q5SY16 702 aaKnown RBP15.36■□□□□ 0.05
GPNMB-204ENST00000459927 GPAT2Q6NUI2 795 aa15.36■□□□□ 0.05
GPNMB-204ENST00000459927 COPRSQ9NQ92 184 aa15.36■□□□□ 0.05
GPNMB-204ENST00000459927 SMC4Q9NTJ3 1288 aa15.36■□□□□ 0.05
GPNMB-204ENST00000459927 SRRDQ9UH36 339 aa15.36■□□□□ 0.05
GPNMB-204ENST00000459927 HDAC5Q9UQL6 1122 aa15.36■□□□□ 0.05
GPNMB-204ENST00000459927 RBBP6Q7Z6E9 1792 aaKnown RBP15.36■□□□□ 0.05
GPNMB-204ENST00000459927 BRCA2P51587 3418 aa15.36■□□□□ 0.05
GPNMB-204ENST00000459927 FMNL1O95466 1100 aaPredicted RBP15.35■□□□□ 0.05
GPNMB-204ENST00000459927 FAM163AQ96GL9 167 aaPredicted RBP15.35■□□□□ 0.05
GPNMB-204ENST00000459927 TRIM47Q96LD4 638 aa15.35■□□□□ 0.05
GPNMB-204ENST00000459927 IDI2Q9BXS1 227 aa15.35■□□□□ 0.05
GPNMB-204ENST00000459927 PA2G4Q9UQ80 394 aaKnown RBP15.35■□□□□ 0.05
GPNMB-204ENST00000459927 ENTPD3O75355 529 aa15.34■□□□□ 0.05
GPNMB-204ENST00000459927 ADORA1P30542 326 aa15.34■□□□□ 0.05
GPNMB-204ENST00000459927 MTFR1Q15390 333 aa15.34■□□□□ 0.05
GPNMB-204ENST00000459927 CCDC102BQ68D86 513 aa15.34■□□□□ 0.05
GPNMB-204ENST00000459927 LRRFIP2Q9Y608 721 aaKnown RBP15.34■□□□□ 0.05
GPNMB-204ENST00000459927 ZHX2Q9Y6X8 837 aa15.34■□□□□ 0.05
GPNMB-204ENST00000459927 CT47B1P0C2W7 299 aaPredicted RBP15.33■□□□□ 0.04
GPNMB-204ENST00000459927 OSBPP22059 807 aa15.33■□□□□ 0.04
GPNMB-204ENST00000459927 RGS3P49796 1198 aa15.33■□□□□ 0.04
GPNMB-204ENST00000459927 SH3BP5LQ7L8J4 393 aa15.33■□□□□ 0.04
GPNMB-204ENST00000459927 FASTKD5Q7L8L6 764 aaKnown RBP15.33■□□□□ 0.04
GPNMB-204ENST00000459927 ZGPATQ8N5A5 531 aaKnown RBP15.33■□□□□ 0.04
GPNMB-204ENST00000459927 API5Q9BZZ5 524 aaKnown RBP15.33■□□□□ 0.04
GPNMB-204ENST00000459927 COLQQ9Y215 455 aaPredicted RBP15.33■□□□□ 0.04
GPNMB-204ENST00000459927 AFG3L2Q9Y4W6 797 aa15.33■□□□□ 0.04
GPNMB-204ENST00000459927 ADGRA2Q96PE1 1338 aa15.33■□□□□ 0.04
GPNMB-204ENST00000459927 CYP2C8P10632 490 aa15.32■□□□□ 0.04
GPNMB-204ENST00000459927 BCRP11274 1271 aa15.32■□□□□ 0.04
GPNMB-204ENST00000459927 PTPRAP18433 802 aa15.32■□□□□ 0.04
GPNMB-204ENST00000459927 GRK4P32298 578 aa15.32■□□□□ 0.04
GPNMB-204ENST00000459927 RAET1EQ8TD07 263 aa15.32■□□□□ 0.04
GPNMB-204ENST00000459927 DDTLA6NHG4 134 aaPredicted RBP15.31■□□□□ 0.04
GPNMB-204ENST00000459927 H0YGN5 161 aa15.31■□□□□ 0.04
GPNMB-204ENST00000459927 SPTY2D1Q68D10 685 aaPredicted RBP15.31■□□□□ 0.04
GPNMB-204ENST00000459927 SLF2Q8IX21 1173 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms