RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 RRP15Q9Y3B9 282 aaKnown RBP7.92□□□□□ -1.14
CUBNP3-201ENST00000457461 CDHR2Q9BYE9 1310 aa7.91□□□□□ -1.14
CUBNP3-201ENST00000457461 SKILP12757 684 aa7.91□□□□□ -1.14
CUBNP3-201ENST00000457461 ALDH1B1P30837 517 aa7.91□□□□□ -1.14
CUBNP3-201ENST00000457461 FOXO4P98177 505 aa7.91□□□□□ -1.14
CUBNP3-201ENST00000457461 ZRSR1Q15695 479 aaKnown RBP7.91□□□□□ -1.14
CUBNP3-201ENST00000457461 FAM182BQ5T319 152 aa7.91□□□□□ -1.14
CUBNP3-201ENST00000457461 KRBA2Q6ZNG9 492 aa7.91□□□□□ -1.14
CUBNP3-201ENST00000457461 KRT27Q7Z3Y8 459 aa7.91□□□□□ -1.14
CUBNP3-201ENST00000457461 NLRP10Q86W26 655 aa7.91□□□□□ -1.14
CUBNP3-201ENST00000457461 ZNF34Q8IZ26 560 aa7.91□□□□□ -1.14
CUBNP3-201ENST00000457461 FBXO41Q8TF61 875 aa7.91□□□□□ -1.14
CUBNP3-201ENST00000457461 COPRSQ9NQ92 184 aa7.91□□□□□ -1.14
CUBNP3-201ENST00000457461 SPATS2LQ9NUQ6 558 aaKnown RBP7.91□□□□□ -1.14
CUBNP3-201ENST00000457461 CPSF2Q9P2I0 782 aaKnown RBP7.91□□□□□ -1.14
CUBNP3-201ENST00000457461 AKAP2Q9Y2D5 859 aa7.91□□□□□ -1.14
CUBNP3-201ENST00000457461 AOX1Q06278 1338 aa7.91□□□□□ -1.14
CUBNP3-201ENST00000457461 ERICH4A6NGS2 130 aa7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 PES1O00541 588 aaKnown RBP7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 RIOK3O14730 519 aaKnown RBP7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 RAD21O60216 631 aa7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 SMARCA5O60264 1052 aaPredicted RBP7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 SURF6O75683 361 aaKnown RBP7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 RPS6KA3P51812 740 aa7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 RASEFQ8IZ41 740 aa7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 RPUSD2Q8IZ73 545 aaKnown RBP7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 OGFOD1Q8N543 542 aa7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 ZBTB38Q8NAP3 1195 aaPredicted RBP7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 ARMC2Q8NEN0 867 aa7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 RHPN1Q8TCX5 695 aa7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 OTUD7AQ8TE49 926 aaPredicted RBP7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 HDAC7Q8WUI4 952 aa7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 RMDN2Q96LZ7 410 aa7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 POLR3CQ9BUI4 534 aaPredicted RBP7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 STAP2Q9UGK3 403 aa7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 UBN2Q6ZU65 1347 aa7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 USP42Q9H9J4 1324 aaKnown RBP7.9□□□□□ -1.14
CUBNP3-201ENST00000457461 CAND2O75155 1236 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 MYBL2P10244 700 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 GSPT1P15170 499 aaKnown RBP7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 PDE1AP54750 535 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 CORO7P57737 925 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 PTPN12Q05209 780 aaKnown RBP7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 TTC22Q5TAA0 569 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 WDR78Q5VTH9 848 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 SDCCAG8Q86SQ7 713 aaPredicted RBP7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 PACS2Q86VP3 889 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 ERC1Q8IUD2 1116 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 C16orf71Q8IYS4 520 aaPredicted RBP7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 SAMD3Q8N6K7 520 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 ACRBPQ8NEB7 543 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 GPT2Q8TD30 523 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 FAM212AQ96EL1 285 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 AK7Q96M32 723 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 TRPV5Q9NQA5 729 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 IRAK4Q9NWZ3 460 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 MKRN1Q9UHC7 482 aaKnown RBP7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 RPS6KA4O75676 772 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 CSF1RP07333 972 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 FAM200BP0CF97 657 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 VDRP11473 427 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 GCFC2P16383 781 aaKnown RBP7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 RDXP35241 583 aaKnown RBP7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 RBM5P52756 815 aaKnown RBP eCLIP7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 MRPL12P52815 198 aaKnown RBP7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 PUS10Q3MIT2 529 aaKnown RBP7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 CLEC4GQ6UXB4 293 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 KCTD17Q8N5Z5 321 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 EXOC4Q96A65 974 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 KIF2CQ99661 725 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 HOMER3Q9NSC5 361 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 GNL3LQ9NVN8 582 aaKnown RBP7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 RGS17Q9UGC6 210 aaPredicted RBP7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 CCNL1Q9UK58 526 aaPredicted RBP7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 BLOC1S6Q9UL45 172 aa7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 PA2G4Q9UQ80 394 aaKnown RBP7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 ZNF330Q9Y3S2 320 aaPredicted RBP7.89□□□□□ -1.15
CUBNP3-201ENST00000457461 SASH1O94885 1247 aa7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 MX1P20591 662 aa7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 GYS2P54840 703 aa7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 DDR1Q08345 913 aa7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 NEDD9Q14511 834 aa7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 TBC1D25Q3MII6 688 aa7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 PARP10Q53GL7 1025 aa7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 CHADLQ6NUI6 762 aa7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 LMBR1LQ6UX01 489 aa7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 ZNF483Q8TF39 744 aaPredicted RBP7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 C17orf50Q8WW18 174 aa7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 JARID2Q92833 1246 aaPredicted RBP7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 ARPC5LQ9BPX5 153 aa7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 CRACR2AQ9BSW2 395 aa7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 UBXN6Q9BZV1 441 aa7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 TRIM6Q9C030 488 aaPredicted RBP7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 ZNF232Q9UNY5 417 aa7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 A0A1B0GUL6 1792 aa7.88□□□□□ -1.15
CUBNP3-201ENST00000457461 SMAPO00193 183 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 APBB1O00213 710 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 TRIM66O15016 1216 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 SFSWAPQ12872 951 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms