RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 ZDHHC15Q96MV8 337 aa10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 TEPSINQ96N21 525 aa10.07□□□□□ -0.8
NIF3L1-209ENST00000454952 RPAP1Q9BWH6 1393 aaPredicted RBP10.06□□□□□ -0.8
NIF3L1-209ENST00000454952 SPDYE5A6NIY4 337 aa10.06□□□□□ -0.8
NIF3L1-209ENST00000454952 IFIT1P09914 478 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-209ENST00000454952 PRMT2P55345 433 aa10.06□□□□□ -0.8
NIF3L1-209ENST00000454952 CHAF1AQ13111 956 aaPredicted RBP10.06□□□□□ -0.8
NIF3L1-209ENST00000454952 SNAPC2Q13487 334 aa10.06□□□□□ -0.8
NIF3L1-209ENST00000454952 PUM3Q15397 648 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-209ENST00000454952 SLC9C1Q4G0N8 1177 aa10.06□□□□□ -0.8
NIF3L1-209ENST00000454952 ERO1BQ86YB8 467 aa10.06□□□□□ -0.8
NIF3L1-209ENST00000454952 OTUD5Q96G74 571 aa10.06□□□□□ -0.8
NIF3L1-209ENST00000454952 PTPN18Q99952 460 aa10.06□□□□□ -0.8
NIF3L1-209ENST00000454952 TMEM39BQ9GZU3 492 aa10.06□□□□□ -0.8
NIF3L1-209ENST00000454952 AOX1Q06278 1338 aa10.06□□□□□ -0.8
NIF3L1-209ENST00000454952 NBPF7P0C2Y1 421 aaPredicted RBP10.05□□□□□ -0.8
NIF3L1-209ENST00000454952 ZEB1P37275 1124 aaPredicted RBP10.05□□□□□ -0.8
NIF3L1-209ENST00000454952 HHIPL2Q6UWX4 724 aa10.05□□□□□ -0.8
NIF3L1-209ENST00000454952 RASEFQ8IZ41 740 aa10.05□□□□□ -0.8
NIF3L1-209ENST00000454952 WDR66Q8TBY9 1149 aa10.05□□□□□ -0.8
NIF3L1-209ENST00000454952 BRI3BPQ8WY22 251 aa10.05□□□□□ -0.8
NIF3L1-209ENST00000454952 KAZALD1Q96I82 304 aa10.05□□□□□ -0.8
NIF3L1-209ENST00000454952 PUS3Q9BZE2 481 aaKnown RBP10.05□□□□□ -0.8
NIF3L1-209ENST00000454952 BICC1Q9H694 974 aaKnown RBP10.05□□□□□ -0.8
NIF3L1-209ENST00000454952 HDAC5Q9UQL6 1122 aa10.05□□□□□ -0.8
NIF3L1-209ENST00000454952 AK9Q5TCS8 1911 aa10.05□□□□□ -0.8
NIF3L1-209ENST00000454952 POTEFA5A3E0 1075 aa10.04□□□□□ -0.8
NIF3L1-209ENST00000454952 TLR2O60603 784 aa10.04□□□□□ -0.8
NIF3L1-209ENST00000454952 SLC5A1P13866 664 aa10.04□□□□□ -0.8
NIF3L1-209ENST00000454952 PPIL2Q13356 520 aa10.04□□□□□ -0.8
NIF3L1-209ENST00000454952 VGLL2Q8N8G2 317 aa10.04□□□□□ -0.8
NIF3L1-209ENST00000454952 ZNF333Q96JL9 665 aa10.04□□□□□ -0.8
NIF3L1-209ENST00000454952 WRNIP1Q96S55 665 aa10.04□□□□□ -0.8
NIF3L1-209ENST00000454952 ZNF341Q9BYN7 854 aa10.04□□□□□ -0.8
NIF3L1-209ENST00000454952 HOXD10P28358 340 aa10.03□□□□□ -0.8
NIF3L1-209ENST00000454952 PPATQ06203 517 aa10.03□□□□□ -0.8
NIF3L1-209ENST00000454952 SLC4A8Q2Y0W8 1093 aa10.03□□□□□ -0.8
NIF3L1-209ENST00000454952 LRRC24Q50LG9 513 aa10.03□□□□□ -0.8
NIF3L1-209ENST00000454952 FAM9BQ8IZU0 186 aa10.03□□□□□ -0.8
NIF3L1-209ENST00000454952 FAM43AQ8N2R8 423 aa10.03□□□□□ -0.8
NIF3L1-209ENST00000454952 ANKRD44Q8N8A2 993 aa10.03□□□□□ -0.8
NIF3L1-209ENST00000454952 LPIN2Q92539 896 aa10.03□□□□□ -0.8
NIF3L1-209ENST00000454952 FAM212AQ96EL1 285 aa10.03□□□□□ -0.8
NIF3L1-209ENST00000454952 GNL3LQ9NVN8 582 aaKnown RBP10.03□□□□□ -0.8
NIF3L1-209ENST00000454952 IQSEC3Q9UPP2 1182 aaPredicted RBP10.03□□□□□ -0.8
NIF3L1-209ENST00000454952 SNCAIPQ9Y6H5 919 aa10.03□□□□□ -0.8
NIF3L1-209ENST00000454952 E9PSI1 815 aa10.02□□□□□ -0.81
NIF3L1-209ENST00000454952 BCAMP50895 628 aa10.02□□□□□ -0.81
NIF3L1-209ENST00000454952 LACTBP83111 547 aaPredicted RBP10.02□□□□□ -0.81
NIF3L1-209ENST00000454952 APOBEC3HQ6NTF7 200 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-209ENST00000454952 MRPL50Q8N5N7 158 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-209ENST00000454952 ZNF316A6NFI3 1004 aaPredicted RBP10.01□□□□□ -0.81
NIF3L1-209ENST00000454952 BTBD19C9JJ37 291 aa10.01□□□□□ -0.81
NIF3L1-209ENST00000454952 EYA2O00167 538 aa10.01□□□□□ -0.81
NIF3L1-209ENST00000454952 IRF6O14896 467 aa10.01□□□□□ -0.81
NIF3L1-209ENST00000454952 SEMA3EO15041 775 aa10.01□□□□□ -0.81
NIF3L1-209ENST00000454952 CHRM1P11229 460 aaPredicted RBP10.01□□□□□ -0.81
NIF3L1-209ENST00000454952 EN2P19622 333 aaPredicted RBP10.01□□□□□ -0.81
NIF3L1-209ENST00000454952 FGFR2P21802 821 aa10.01□□□□□ -0.81
NIF3L1-209ENST00000454952 CACNB3P54284 484 aa10.01□□□□□ -0.81
NIF3L1-209ENST00000454952 HABP4Q5JVS0 413 aaKnown RBP10.01□□□□□ -0.81
NIF3L1-209ENST00000454952 ANKRD23Q86SG2 305 aa10.01□□□□□ -0.81
NIF3L1-209ENST00000454952 CDAN1Q8IWY9 1227 aa10.01□□□□□ -0.81
NIF3L1-209ENST00000454952 ZGPATQ8N5A5 531 aaKnown RBP10.01□□□□□ -0.81
NIF3L1-209ENST00000454952 FAM151AQ8WW52 585 aa10.01□□□□□ -0.81
NIF3L1-209ENST00000454952 USP44Q9H0E7 712 aa10.01□□□□□ -0.81
NIF3L1-209ENST00000454952 PTCH2Q9Y6C5 1203 aa10.01□□□□□ -0.81
NIF3L1-209ENST00000454952 ZNF521Q96K83 1311 aa10.01□□□□□ -0.81
NIF3L1-209ENST00000454952 CIAO1O76071 339 aa10□□□□□ -0.81
NIF3L1-209ENST00000454952 GRIK5Q16478 980 aa10□□□□□ -0.81
NIF3L1-209ENST00000454952 ALDH1L2Q3SY69 923 aa10□□□□□ -0.81
NIF3L1-209ENST00000454952 SLF2Q8IX21 1173 aa10□□□□□ -0.81
NIF3L1-209ENST00000454952 NKX2-3Q8TAU0 364 aa10□□□□□ -0.81
NIF3L1-209ENST00000454952 ZKSCAN4Q969J2 545 aaPredicted RBP10□□□□□ -0.81
NIF3L1-209ENST00000454952 CEP126Q9P2H0 1117 aa10□□□□□ -0.81
NIF3L1-209ENST00000454952 LDHBP07195 334 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-209ENST00000454952 UBTFL1P0CB47 393 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-209ENST00000454952 CAPN2P17655 700 aa9.99□□□□□ -0.81
NIF3L1-209ENST00000454952 ATP2B3Q16720 1220 aa9.99□□□□□ -0.81
NIF3L1-209ENST00000454952 NOL9Q5SY16 702 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-209ENST00000454952 HS6ST3Q8IZP7 471 aa9.99□□□□□ -0.81
NIF3L1-209ENST00000454952 PARK7Q99497 189 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-209ENST00000454952 ZNF112Q9UJU3 913 aa9.99□□□□□ -0.81
NIF3L1-209ENST00000454952 DENND2AQ9ULE3 1009 aa9.99□□□□□ -0.81
NIF3L1-209ENST00000454952 KCNH4Q9UQ05 1017 aa9.99□□□□□ -0.81
NIF3L1-209ENST00000454952 DAGLAQ9Y4D2 1042 aa9.99□□□□□ -0.81
NIF3L1-209ENST00000454952 SALL1Q9NSC2 1324 aa9.99□□□□□ -0.81
NIF3L1-209ENST00000454952 DOCK2Q92608 1830 aa9.98□□□□□ -0.81
NIF3L1-209ENST00000454952 MYH2Q9UKX2 1941 aa9.98□□□□□ -0.81
NIF3L1-209ENST00000454952 PDHXO00330 501 aa9.98□□□□□ -0.81
NIF3L1-209ENST00000454952 CXCL11O14625 94 aa9.98□□□□□ -0.81
NIF3L1-209ENST00000454952 CT47B1P0C2W7 299 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-209ENST00000454952 CDC42EP5Q6NZY7 148 aa9.98□□□□□ -0.81
NIF3L1-209ENST00000454952 C17orf99Q6UX52 265 aa9.98□□□□□ -0.81
NIF3L1-209ENST00000454952 MIGA2Q7L4E1 593 aa9.98□□□□□ -0.81
NIF3L1-209ENST00000454952 FASTKD5Q7L8L6 764 aaKnown RBP9.98□□□□□ -0.81
NIF3L1-209ENST00000454952 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-209ENST00000454952 KLHDC4Q8TBB5 520 aa9.98□□□□□ -0.81
NIF3L1-209ENST00000454952 RAET1EQ8TD07 263 aa9.98□□□□□ -0.81
NIF3L1-209ENST00000454952 SSH1Q8WYL5 1049 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms