RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 FBXO18Q8NFZ0 1043 aa13.86□□□□□ -0.19
SMPD4-213ENST00000454468 NEDD4P46934 1319 aa13.86□□□□□ -0.19
SMPD4-213ENST00000454468 ANTXR2P58335 489 aa13.86□□□□□ -0.19
SMPD4-213ENST00000454468 HS1BP3Q53T59 392 aa13.86□□□□□ -0.19
SMPD4-213ENST00000454468 APOA5Q6Q788 366 aa13.86□□□□□ -0.19
SMPD4-213ENST00000454468 ZHX1Q9UKY1 873 aaPredicted RBP13.86□□□□□ -0.19
SMPD4-213ENST00000454468 BTBD18B2RXH4 712 aa13.85□□□□□ -0.19
SMPD4-213ENST00000454468 CDC27P30260 824 aa13.85□□□□□ -0.19
SMPD4-213ENST00000454468 FAM47AQ5JRC9 791 aa13.85□□□□□ -0.19
SMPD4-213ENST00000454468 ANO1Q5XXA6 986 aa13.85□□□□□ -0.19
SMPD4-213ENST00000454468 CNNM3Q8NE01 707 aa13.85□□□□□ -0.19
SMPD4-213ENST00000454468 GPR101Q96P66 508 aaPredicted RBP13.85□□□□□ -0.19
SMPD4-213ENST00000454468 TMX1Q9H3N1 280 aa13.85□□□□□ -0.19
SMPD4-213ENST00000454468 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.85□□□□□ -0.19
SMPD4-213ENST00000454468 LRRC37A3O60309 1634 aa13.85□□□□□ -0.19
SMPD4-213ENST00000454468 HOMER1Q86YM7 354 aa13.85□□□□□ -0.19
SMPD4-213ENST00000454468 NLRP3Q96P20 1036 aa13.85□□□□□ -0.19
SMPD4-213ENST00000454468 TMC6Q7Z403 805 aa13.84□□□□□ -0.19
SMPD4-213ENST00000454468 DZIP1Q86YF9 867 aaKnown RBP13.84□□□□□ -0.19
SMPD4-213ENST00000454468 STRBPQ96SI9 672 aaKnown RBP13.84□□□□□ -0.19
SMPD4-213ENST00000454468 KIF28PB7ZC32 967 aa13.84□□□□□ -0.19
SMPD4-213ENST00000454468 PATL2C9JE40 543 aaKnown RBP13.84□□□□□ -0.19
SMPD4-213ENST00000454468 NRDCO43847 1150 aa13.84□□□□□ -0.19
SMPD4-213ENST00000454468 ZNF202O95125 648 aa13.84□□□□□ -0.19
SMPD4-213ENST00000454468 TRIM28Q13263 835 aaKnown RBP13.84□□□□□ -0.19
SMPD4-213ENST00000454468 CFAP100Q494V2 611 aa13.84□□□□□ -0.19
SMPD4-213ENST00000454468 JMYQ8N9B5 988 aa13.84□□□□□ -0.19
SMPD4-213ENST00000454468 MROH5Q6ZUA9 1318 aa13.84□□□□□ -0.19
SMPD4-213ENST00000454468 PTF1AQ7RTS3 328 aa13.84□□□□□ -0.19
SMPD4-213ENST00000454468 MB21D2Q8IYB1 491 aaPredicted RBP13.84□□□□□ -0.19
SMPD4-213ENST00000454468 KCNG4Q8TDN1 519 aa13.84□□□□□ -0.19
SMPD4-213ENST00000454468 CABP5Q9NP86 173 aa13.84□□□□□ -0.19
SMPD4-213ENST00000454468 BAZ2BQ9UIF8 2168 aaKnown RBP13.84□□□□□ -0.19
SMPD4-213ENST00000454468 AFMP43652 599 aa13.83□□□□□ -0.19
SMPD4-213ENST00000454468 AKNAD1Q5T1N1 836 aa13.83□□□□□ -0.19
SMPD4-213ENST00000454468 OLFM4Q6UX06 510 aa13.83□□□□□ -0.19
SMPD4-213ENST00000454468 SMARCC2Q8TAQ2 1214 aa13.83□□□□□ -0.19
SMPD4-213ENST00000454468 NKX2-3Q8TAU0 364 aa13.83□□□□□ -0.19
SMPD4-213ENST00000454468 PALLDQ8WX93 1383 aa13.83□□□□□ -0.19
SMPD4-213ENST00000454468 USP5P45974 858 aa13.83□□□□□ -0.2
SMPD4-213ENST00000454468 DIS3L2Q8IYB7 885 aaKnown RBP13.83□□□□□ -0.2
SMPD4-213ENST00000454468 STAMQ92783 540 aa13.83□□□□□ -0.2
SMPD4-213ENST00000454468 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.83□□□□□ -0.2
SMPD4-213ENST00000454468 V9GYY5 206 aaPredicted RBP13.83□□□□□ -0.2
SMPD4-213ENST00000454468 G3V3G9 751 aa13.83□□□□□ -0.2
SMPD4-213ENST00000454468 ZNF75DP51815 510 aa13.83□□□□□ -0.2
SMPD4-213ENST00000454468 NR5A1Q13285 461 aa13.83□□□□□ -0.2
SMPD4-213ENST00000454468 DCAF8Q5TAQ9 597 aa13.83□□□□□ -0.2
SMPD4-213ENST00000454468 CELF1Q92879 486 aaKnown RBP13.83□□□□□ -0.2
SMPD4-213ENST00000454468 VPS54Q9P1Q0 977 aa13.83□□□□□ -0.2
SMPD4-213ENST00000454468 ZNF219Q9P2Y4 722 aaPredicted RBP13.83□□□□□ -0.2
SMPD4-213ENST00000454468 RCOR1Q9UKL0 485 aa13.83□□□□□ -0.2
SMPD4-213ENST00000454468 ELP1O95163 1332 aa13.83□□□□□ -0.2
SMPD4-213ENST00000454468 TSPY2A6NKD2 308 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 USP17L12C9JPN9 530 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 USP17L21D6R901 530 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 RFC4P35249 363 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 IFIT1BQ5T764 474 aaKnown RBP13.82□□□□□ -0.2
SMPD4-213ENST00000454468 IFNKQ9P0W0 207 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 V9GY48 417 aaPredicted RBP13.82□□□□□ -0.2
SMPD4-213ENST00000454468 F8W031 263 aaPredicted RBP13.82□□□□□ -0.2
SMPD4-213ENST00000454468 PNOCQ13519 176 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 UBE3CQ15386 1083 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 DPCR1Q3MIW9 517 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 IQCA1Q86XH1 822 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 CTAGE5O15320 804 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 ZNF500O60304 480 aaPredicted RBP13.82□□□□□ -0.2
SMPD4-213ENST00000454468 TNNT1P13805 278 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 PFKFB1P16118 471 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 ATP2B2Q01814 1243 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 ZNF827Q17R98 1081 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 KRT23Q9C075 422 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 VAT1LQ9HCJ6 419 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 PRDM10Q9NQV6 1147 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 STX8Q9UNK0 236 aa13.82□□□□□ -0.2
SMPD4-213ENST00000454468 GUCY1A2P33402 732 aa13.81□□□□□ -0.2
SMPD4-213ENST00000454468 PARP10Q53GL7 1025 aa13.81□□□□□ -0.2
SMPD4-213ENST00000454468 LINC00301Q8NCQ3 95 aa13.81□□□□□ -0.2
SMPD4-213ENST00000454468 NOL10Q9BSC4 688 aaKnown RBP13.81□□□□□ -0.2
SMPD4-213ENST00000454468 MCM9Q9NXL9 1143 aa13.81□□□□□ -0.2
SMPD4-213ENST00000454468 SKILP12757 684 aa13.81□□□□□ -0.2
SMPD4-213ENST00000454468 XBP1P17861 261 aa13.81□□□□□ -0.2
SMPD4-213ENST00000454468 EIF5P55010 431 aaKnown RBP13.81□□□□□ -0.2
SMPD4-213ENST00000454468 C3orf67Q6ZVT6 689 aa13.81□□□□□ -0.2
SMPD4-213ENST00000454468 ESR2Q92731 530 aa13.81□□□□□ -0.2
SMPD4-213ENST00000454468 MKNK2Q9HBH9 465 aa13.81□□□□□ -0.2
SMPD4-213ENST00000454468 CCNL1Q9UK58 526 aaPredicted RBP13.81□□□□□ -0.2
SMPD4-213ENST00000454468 KIF23Q02241 960 aaPredicted RBP13.81□□□□□ -0.2
SMPD4-213ENST00000454468 SAMD1Q6SPF0 538 aaPredicted RBP13.81□□□□□ -0.2
SMPD4-213ENST00000454468 KDM3BQ7LBC6 1761 aa13.8□□□□□ -0.2
SMPD4-213ENST00000454468 SH2B2O14492 632 aaPredicted RBP13.8□□□□□ -0.2
SMPD4-213ENST00000454468 PPARAQ07869 468 aa13.8□□□□□ -0.2
SMPD4-213ENST00000454468 INTS5Q6P9B9 1019 aaKnown RBP13.8□□□□□ -0.2
SMPD4-213ENST00000454468 CATIPQ7Z7H3 387 aa13.8□□□□□ -0.2
SMPD4-213ENST00000454468 RNF41Q9H4P4 317 aaPredicted RBP13.8□□□□□ -0.2
SMPD4-213ENST00000454468 EPB41L4AQ9HCS5 686 aaPredicted RBP13.8□□□□□ -0.2
SMPD4-213ENST00000454468 SAP30BPQ9UHR5 308 aaKnown RBP13.8□□□□□ -0.2
SMPD4-213ENST00000454468 FBXO3Q9UK99 471 aa13.8□□□□□ -0.2
SMPD4-213ENST00000454468 HPS5Q9UPZ3 1129 aa13.8□□□□□ -0.2
SMPD4-213ENST00000454468 MARF1Q9Y4F3 1742 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms