RNA–Protein interactions for RNA: ENST00000444476.1

LINC00475-208, long intergenic non-protein coding RNA 475, human

TSL 3

Gene LINC00475, Length 456 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00475-208	ENST00000444476	RTL5	Q5HYW3	569 aa	Predicted RBP	13.94	□□□□□ -0.18
LINC00475-208	ENST00000444476	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.94	□□□□□ -0.18
LINC00475-208	ENST00000444476	PLA2G12B	Q9BX93	195 aa		13.94	□□□□□ -0.18
LINC00475-208	ENST00000444476	SRCIN1	Q9C0H9	1055 aa		13.94	□□□□□ -0.18
LINC00475-208	ENST00000444476	VPS33B	Q9H267	617 aa		13.94	□□□□□ -0.18
LINC00475-208	ENST00000444476	RTL9	Q8NET4	1388 aa		13.94	□□□□□ -0.18
LINC00475-208	ENST00000444476	DICER1	Q9UPY3	1922 aa	Known RBP	13.94	□□□□□ -0.18
LINC00475-208	ENST00000444476		F6X3S4	739 aa		13.93	□□□□□ -0.18
LINC00475-208	ENST00000444476	CTSW	P56202	376 aa		13.93	□□□□□ -0.18
LINC00475-208	ENST00000444476	RASSF7	Q02833	373 aa		13.93	□□□□□ -0.18
LINC00475-208	ENST00000444476	UBE3B	Q7Z3V4	1068 aa		13.93	□□□□□ -0.18
LINC00475-208	ENST00000444476	SP8	Q8IXZ3	490 aa		13.93	□□□□□ -0.18
LINC00475-208	ENST00000444476	SUPT20H	Q8NEM7	779 aa		13.93	□□□□□ -0.18
LINC00475-208	ENST00000444476	PURB	Q96QR8	312 aa	Known RBP	13.93	□□□□□ -0.18
LINC00475-208	ENST00000444476	TBC1D2	Q9BYX2	928 aa		13.93	□□□□□ -0.18
LINC00475-208	ENST00000444476	SNED1	Q8TER0	1413 aa		13.92	□□□□□ -0.18
LINC00475-208	ENST00000444476	GRM8	O00222	908 aa		13.92	□□□□□ -0.18
LINC00475-208	ENST00000444476	RARS	P54136	660 aa	Known RBP	13.92	□□□□□ -0.18
LINC00475-208	ENST00000444476	SLC4A10	Q6U841	1118 aa		13.92	□□□□□ -0.18
LINC00475-208	ENST00000444476	ARHGAP45	Q92619	1136 aa		13.92	□□□□□ -0.18
LINC00475-208	ENST00000444476	CDK15	Q96Q40	435 aa		13.92	□□□□□ -0.18
LINC00475-208	ENST00000444476	CDC5L	Q99459	802 aa	Known RBP	13.92	□□□□□ -0.18
LINC00475-208	ENST00000444476	API5	Q9BZZ5	524 aa	Known RBP	13.92	□□□□□ -0.18
LINC00475-208	ENST00000444476	CCDC88A	Q3V6T2	1871 aa		13.92	□□□□□ -0.18
LINC00475-208	ENST00000444476	KDM2B	Q8NHM5	1336 aa		13.91	□□□□□ -0.18
LINC00475-208	ENST00000444476	IPO8	O15397	1037 aa	Known RBP	13.91	□□□□□ -0.18
LINC00475-208	ENST00000444476	RPS8	P62241	208 aa	Known RBP	13.91	□□□□□ -0.18
LINC00475-208	ENST00000444476	BCL2L13	Q9BXK5	485 aa		13.91	□□□□□ -0.18
LINC00475-208	ENST00000444476	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.91	□□□□□ -0.18
LINC00475-208	ENST00000444476	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.91	□□□□□ -0.18
LINC00475-208	ENST00000444476	LRRC37A	A6NMS7	1700 aa		13.9	□□□□□ -0.18
LINC00475-208	ENST00000444476	CCT4	P50991	539 aa	Known RBP	13.9	□□□□□ -0.18
LINC00475-208	ENST00000444476	CASP7	P55210	303 aa		13.9	□□□□□ -0.18
LINC00475-208	ENST00000444476	PRPF38B	Q5VTL8	546 aa	Known RBP	13.9	□□□□□ -0.18
LINC00475-208	ENST00000444476	TTLL11	Q8NHH1	800 aa		13.9	□□□□□ -0.18
LINC00475-208	ENST00000444476	SPTLC1	O15269	473 aa		13.89	□□□□□ -0.19
LINC00475-208	ENST00000444476	IARS	P41252	1262 aa	Known RBP	13.89	□□□□□ -0.19
LINC00475-208	ENST00000444476	NR5A1	Q13285	461 aa		13.89	□□□□□ -0.19
LINC00475-208	ENST00000444476	DPP8	Q6V1X1	898 aa	Predicted RBP	13.89	□□□□□ -0.19
LINC00475-208	ENST00000444476	ANKRD18A	Q8IVF6	992 aa		13.89	□□□□□ -0.19
LINC00475-208	ENST00000444476	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.89	□□□□□ -0.19
LINC00475-208	ENST00000444476	HDAC5	Q9UQL6	1122 aa		13.89	□□□□□ -0.19
LINC00475-208	ENST00000444476	TIAM2	Q8IVF5	1701 aa		13.89	□□□□□ -0.19
LINC00475-208	ENST00000444476	UTY	O14607	1347 aa		13.89	□□□□□ -0.19
LINC00475-208	ENST00000444476	CSF1R	P07333	972 aa		13.88	□□□□□ -0.19
LINC00475-208	ENST00000444476	LOR	P23490	312 aa	Predicted RBP	13.88	□□□□□ -0.19
LINC00475-208	ENST00000444476	ARID5B	Q14865	1188 aa		13.88	□□□□□ -0.19
LINC00475-208	ENST00000444476	JDP2	Q8WYK2	163 aa		13.88	□□□□□ -0.19
LINC00475-208	ENST00000444476	CELF1	Q92879	486 aa	Known RBP	13.88	□□□□□ -0.19
LINC00475-208	ENST00000444476	KLF16	Q9BXK1	252 aa	Predicted RBP	13.88	□□□□□ -0.19
LINC00475-208	ENST00000444476	NOB1	Q9ULX3	412 aa	Known RBP	13.88	□□□□□ -0.19
LINC00475-208	ENST00000444476	GLTPD2	A6NH11	291 aa		13.87	□□□□□ -0.19
LINC00475-208	ENST00000444476	CFAP99	D6REC4	459 aa		13.87	□□□□□ -0.19
LINC00475-208	ENST00000444476	PRELP	P51888	382 aa		13.87	□□□□□ -0.19
LINC00475-208	ENST00000444476	AGER	Q15109	404 aa		13.87	□□□□□ -0.19
LINC00475-208	ENST00000444476	OLFM4	Q6UX06	510 aa		13.87	□□□□□ -0.19
LINC00475-208	ENST00000444476	JARID2	Q92833	1246 aa	Predicted RBP	13.87	□□□□□ -0.19
LINC00475-208	ENST00000444476	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.87	□□□□□ -0.19
LINC00475-208	ENST00000444476	TAF1	P21675	1872 aa		13.87	□□□□□ -0.19
LINC00475-208	ENST00000444476	F12	P00748	615 aa	Predicted RBP	13.86	□□□□□ -0.19
LINC00475-208	ENST00000444476	IGHMBP2	P38935	993 aa	Known RBP	13.86	□□□□□ -0.19
LINC00475-208	ENST00000444476	BPHL	Q86WA6	291 aa	Predicted RBP	13.86	□□□□□ -0.19
LINC00475-208	ENST00000444476	ZC3H15	Q8WU90	426 aa	Known RBP	13.86	□□□□□ -0.19
LINC00475-208	ENST00000444476	FOXJ1	Q92949	421 aa		13.86	□□□□□ -0.19
LINC00475-208	ENST00000444476	GREM2	Q9H772	168 aa		13.86	□□□□□ -0.19
LINC00475-208	ENST00000444476	SEC31B	Q9NQW1	1179 aa		13.86	□□□□□ -0.19
LINC00475-208	ENST00000444476	BSDC1	Q9NW68	430 aa	Predicted RBP	13.86	□□□□□ -0.19
LINC00475-208	ENST00000444476	PODXL2	Q9NZ53	605 aa		13.86	□□□□□ -0.19
LINC00475-208	ENST00000444476	ANKRD18B	A2A2Z9	1011 aa		13.85	□□□□□ -0.19
LINC00475-208	ENST00000444476	UPP2	O95045	317 aa		13.85	□□□□□ -0.19
LINC00475-208	ENST00000444476	ZIC2	O95409	532 aa	Predicted RBP	13.85	□□□□□ -0.19
LINC00475-208	ENST00000444476	VSIG8	P0DPA2	414 aa		13.85	□□□□□ -0.19
LINC00475-208	ENST00000444476	ITGA6	P23229	1130 aa		13.85	□□□□□ -0.19
LINC00475-208	ENST00000444476	IFIT5	Q13325	482 aa	Known RBP	13.85	□□□□□ -0.19
LINC00475-208	ENST00000444476	LARGE2	Q8N3Y3	721 aa		13.85	□□□□□ -0.19
LINC00475-208	ENST00000444476	EYA3	Q99504	573 aa		13.85	□□□□□ -0.19
LINC00475-208	ENST00000444476	MAP10	Q9P2G4	905 aa		13.85	□□□□□ -0.19
LINC00475-208	ENST00000444476	PCDHB15	Q9Y5E8	787 aa		13.85	□□□□□ -0.19
LINC00475-208	ENST00000444476	FZD9	O00144	591 aa		13.84	□□□□□ -0.19
LINC00475-208	ENST00000444476	PPIP5K2	O43314	1243 aa		13.84	□□□□□ -0.19
LINC00475-208	ENST00000444476	MAN1A2	O60476	641 aa		13.84	□□□□□ -0.19
LINC00475-208	ENST00000444476	FOXO4	P98177	505 aa		13.84	□□□□□ -0.19
LINC00475-208	ENST00000444476	KIAA2012	Q0VF49	1180 aa		13.84	□□□□□ -0.19
LINC00475-208	ENST00000444476	CCDC57	Q2TAC2	916 aa		13.84	□□□□□ -0.19
LINC00475-208	ENST00000444476	ATF7IP	Q6VMQ6	1270 aa		13.84	□□□□□ -0.19
LINC00475-208	ENST00000444476	NIM1K	Q8IY84	436 aa		13.84	□□□□□ -0.19
LINC00475-208	ENST00000444476	ARMC2	Q8NEN0	867 aa		13.84	□□□□□ -0.19
LINC00475-208	ENST00000444476	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.84	□□□□□ -0.19
LINC00475-208	ENST00000444476	MPHOSPH8	Q99549	860 aa		13.84	□□□□□ -0.19
LINC00475-208	ENST00000444476	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.84	□□□□□ -0.19
LINC00475-208	ENST00000444476	XDH	P47989	1333 aa		13.84	□□□□□ -0.19
LINC00475-208	ENST00000444476	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.83	□□□□□ -0.2
LINC00475-208	ENST00000444476	EIF6	P56537	245 aa	Known RBP	13.83	□□□□□ -0.2
LINC00475-208	ENST00000444476	RABL6	Q3YEC7	729 aa	Predicted RBP	13.83	□□□□□ -0.2
LINC00475-208	ENST00000444476	ZKSCAN2	Q63HK3	967 aa		13.83	□□□□□ -0.2
LINC00475-208	ENST00000444476	INTS3	Q68E01	1043 aa	Known RBP	13.83	□□□□□ -0.2
LINC00475-208	ENST00000444476	PARP9	Q8IXQ6	854 aa		13.83	□□□□□ -0.2
LINC00475-208	ENST00000444476	ZNF526	Q8TF50	670 aa	Predicted RBP	13.83	□□□□□ -0.2
LINC00475-208	ENST00000444476	USP44	Q9H0E7	712 aa		13.83	□□□□□ -0.2
LINC00475-208	ENST00000444476	ANKIB1	Q9P2G1	1089 aa		13.83	□□□□□ -0.2

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