RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 PTPN22Q9Y2R2 807 aa25.79■■□□□ 1.72
CPNE1-219ENST00000440240 SNCAIPQ9Y6H5 919 aa25.79■■□□□ 1.72
CPNE1-219ENST00000440240 RPAP1Q9BWH6 1393 aaPredicted RBP25.79■■□□□ 1.72
CPNE1-219ENST00000440240 ZBTB22O15209 634 aa25.78■■□□□ 1.72
CPNE1-219ENST00000440240 CETPP11597 493 aa25.78■■□□□ 1.72
CPNE1-219ENST00000440240 ZKSCAN4Q969J2 545 aaPredicted RBP25.78■■□□□ 1.72
CPNE1-219ENST00000440240 MEIS3Q99687 375 aa25.78■■□□□ 1.72
CPNE1-219ENST00000440240 PA2G4Q9UQ80 394 aaKnown RBP25.78■■□□□ 1.72
CPNE1-219ENST00000440240 DAGLAQ9Y4D2 1042 aa25.78■■□□□ 1.72
CPNE1-219ENST00000440240 SALL1Q9NSC2 1324 aa25.78■■□□□ 1.72
CPNE1-219ENST00000440240 OTOFQ9HC10 1997 aa25.77■■□□□ 1.72
CPNE1-219ENST00000440240 GNAI3P08754 354 aa25.77■■□□□ 1.72
CPNE1-219ENST00000440240 PRDX5P30044 214 aa25.77■■□□□ 1.72
CPNE1-219ENST00000440240 SNAPC2Q13487 334 aa25.77■■□□□ 1.72
CPNE1-219ENST00000440240 DIXDC1Q155Q3 683 aa25.77■■□□□ 1.72
CPNE1-219ENST00000440240 CDC42EP5Q6NZY7 148 aa25.77■■□□□ 1.72
CPNE1-219ENST00000440240 FAM43AQ8N2R8 423 aa25.77■■□□□ 1.72
CPNE1-219ENST00000440240 ZCCHC17Q9NP64 241 aaKnown RBP25.77■■□□□ 1.72
CPNE1-219ENST00000440240 MIGA2Q7L4E1 593 aa25.76■■□□□ 1.71
CPNE1-219ENST00000440240 ZGPATQ8N5A5 531 aaKnown RBP25.76■■□□□ 1.71
CPNE1-219ENST00000440240 IRF6O14896 467 aa25.75■■□□□ 1.71
CPNE1-219ENST00000440240 IPO8O15397 1037 aaKnown RBP25.75■■□□□ 1.71
CPNE1-219ENST00000440240 SLC34A2O95436 690 aa25.75■■□□□ 1.71
CPNE1-219ENST00000440240 PHKA1P46020 1223 aa25.75■■□□□ 1.71
CPNE1-219ENST00000440240 PPIL2Q13356 520 aa25.75■■□□□ 1.71
CPNE1-219ENST00000440240 CCDC102BQ68D86 513 aa25.75■■□□□ 1.71
CPNE1-219ENST00000440240 USP40Q9NVE5 1235 aa25.75■■□□□ 1.71
CPNE1-219ENST00000440240 PPATQ06203 517 aa25.74■■□□□ 1.71
CPNE1-219ENST00000440240 TCP10Q12799 353 aa25.74■■□□□ 1.71
CPNE1-219ENST00000440240 AKAP2Q9Y2D5 859 aa25.73■■□□□ 1.71
CPNE1-219ENST00000440240 SRGAP3O43295 1099 aa25.72■■□□□ 1.71
CPNE1-219ENST00000440240 TIMM10P62072 90 aa25.72■■□□□ 1.71
CPNE1-219ENST00000440240 MTX1Q13505 466 aa25.72■■□□□ 1.71
CPNE1-219ENST00000440240 PRPF38BQ5VTL8 546 aaKnown RBP25.72■■□□□ 1.71
CPNE1-219ENST00000440240 ZNF112Q9UJU3 913 aa25.72■■□□□ 1.71
CPNE1-219ENST00000440240 HTTP42858 3142 aa25.71■■□□□ 1.71
CPNE1-219ENST00000440240 TLR2O60603 784 aa25.71■■□□□ 1.71
CPNE1-219ENST00000440240 ADORA1P30542 326 aa25.71■■□□□ 1.71
CPNE1-219ENST00000440240 NFIAQ12857 509 aa25.71■■□□□ 1.71
CPNE1-219ENST00000440240 SLF2Q8IX21 1173 aa25.71■■□□□ 1.71
CPNE1-219ENST00000440240 BTBD19C9JJ37 291 aa25.7■■□□□ 1.7
CPNE1-219ENST00000440240 INPP5BP32019 993 aa25.7■■□□□ 1.7
CPNE1-219ENST00000440240 SPTY2D1Q68D10 685 aaPredicted RBP25.7■■□□□ 1.7
CPNE1-219ENST00000440240 ARMC5Q96C12 935 aa25.7■■□□□ 1.7
CPNE1-219ENST00000440240 FAM198AQ9UFP1 575 aa25.7■■□□□ 1.7
CPNE1-219ENST00000440240 MYH13Q9UKX3 1938 aa25.7■■□□□ 1.7
CPNE1-219ENST00000440240 PDS5AQ29RF7 1337 aaKnown RBP25.69■■□□□ 1.7
CPNE1-219ENST00000440240 A0A1B0GUL7 405 aa25.69■■□□□ 1.7
CPNE1-219ENST00000440240 MVPQ14764 893 aaKnown RBP25.69■■□□□ 1.7
CPNE1-219ENST00000440240 KIF22Q14807 665 aa25.69■■□□□ 1.7
CPNE1-219ENST00000440240 CAP1Q01518 475 aa25.68■■□□□ 1.7
CPNE1-219ENST00000440240 TFCP2Q12800 502 aa25.68■■□□□ 1.7
CPNE1-219ENST00000440240 RASGRF1Q13972 1273 aa25.68■■□□□ 1.7
CPNE1-219ENST00000440240 NBPF11Q86T75 865 aa25.68■■□□□ 1.7
CPNE1-219ENST00000440240 DZIP1Q86YF9 867 aaKnown RBP25.68■■□□□ 1.7
CPNE1-219ENST00000440240 FAM163AQ96GL9 167 aaPredicted RBP25.68■■□□□ 1.7
CPNE1-219ENST00000440240 IDI2Q9BXS1 227 aa25.68■■□□□ 1.7
CPNE1-219ENST00000440240 ABCF2Q9UG63 623 aa25.68■■□□□ 1.7
CPNE1-219ENST00000440240 ENTPD3O75355 529 aa25.67■■□□□ 1.7
CPNE1-219ENST00000440240 NOL9Q5SY16 702 aaKnown RBP25.67■■□□□ 1.7
CPNE1-219ENST00000440240 ATF7IPQ6VMQ6 1270 aa25.67■■□□□ 1.7
CPNE1-219ENST00000440240 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.67■■□□□ 1.7
CPNE1-219ENST00000440240 XAGE2Q96GT9 111 aa25.67■■□□□ 1.7
CPNE1-219ENST00000440240 KCNH4Q9UQ05 1017 aa25.67■■□□□ 1.7
CPNE1-219ENST00000440240 GAKO14976 1311 aa25.66■■□□□ 1.7
CPNE1-219ENST00000440240 POTEFA5A3E0 1075 aa25.66■■□□□ 1.7
CPNE1-219ENST00000440240 GNRH1P01148 92 aa25.66■■□□□ 1.7
CPNE1-219ENST00000440240 GNAI2P04899 355 aa25.66■■□□□ 1.7
CPNE1-219ENST00000440240 TRIM27P14373 513 aa25.66■■□□□ 1.7
CPNE1-219ENST00000440240 ANKRD23Q86SG2 305 aa25.66■■□□□ 1.7
CPNE1-219ENST00000440240 FRAT1Q92837 279 aaPredicted RBP25.66■■□□□ 1.7
CPNE1-219ENST00000440240 CENPFP49454 3210 aa25.66■■□□□ 1.7
CPNE1-219ENST00000440240 KIAA0100Q14667 2235 aaKnown RBP25.65■■□□□ 1.7
CPNE1-219ENST00000440240 RGS3P49796 1198 aa25.65■■□□□ 1.7
CPNE1-219ENST00000440240 LACTBP83111 547 aaPredicted RBP25.65■■□□□ 1.7
CPNE1-219ENST00000440240 ZFPM1Q8IX07 1006 aa25.65■■□□□ 1.7
CPNE1-219ENST00000440240 NEUROD6Q96NK8 337 aa25.65■■□□□ 1.7
CPNE1-219ENST00000440240 TMEM106CQ9BVX2 250 aa25.65■■□□□ 1.7
CPNE1-219ENST00000440240 SLC9C1Q4G0N8 1177 aa25.64■■□□□ 1.7
CPNE1-219ENST00000440240 AK9Q5TCS8 1911 aa25.63■■□□□ 1.69
CPNE1-219ENST00000440240 PDHXO00330 501 aa25.63■■□□□ 1.69
CPNE1-219ENST00000440240 BCAR3O75815 825 aa25.63■■□□□ 1.69
CPNE1-219ENST00000440240 GORABQ5T7V8 394 aa25.63■■□□□ 1.69
CPNE1-219ENST00000440240 ERICH6Q7L0X2 663 aa25.63■■□□□ 1.69
CPNE1-219ENST00000440240 ZSCAN29Q8IWY8 852 aaPredicted RBP25.63■■□□□ 1.69
CPNE1-219ENST00000440240 PTCH2Q9Y6C5 1203 aa25.63■■□□□ 1.69
CPNE1-219ENST00000440240 CXCL11O14625 94 aa25.62■■□□□ 1.69
CPNE1-219ENST00000440240 G3BP1Q13283 466 aaKnown RBP eCLIP25.62■■□□□ 1.697e-8■□□□□ 11.2
CPNE1-219ENST00000440240 C17orf99Q6UX52 265 aa25.62■■□□□ 1.69
CPNE1-219ENST00000440240 ZNF333Q96JL9 665 aa25.62■■□□□ 1.69
CPNE1-219ENST00000440240 PHF20L1A8MW92 1017 aa25.61■■□□□ 1.69
CPNE1-219ENST00000440240 PRMT2P55345 433 aa25.61■■□□□ 1.69
CPNE1-219ENST00000440240 MAP3K10Q02779 954 aa25.61■■□□□ 1.69
CPNE1-219ENST00000440240 CLUAP1Q96AJ1 413 aa25.61■■□□□ 1.69
CPNE1-219ENST00000440240 PICK1Q9NRD5 415 aa25.61■■□□□ 1.69
CPNE1-219ENST00000440240 BTDP43251 543 aa25.6■■□□□ 1.69
CPNE1-219ENST00000440240 MECOMQ03112 1051 aa25.6■■□□□ 1.69
CPNE1-219ENST00000440240 HMG20BQ9P0W2 317 aa25.6■■□□□ 1.69
CPNE1-219ENST00000440240 MROH7-TTC4A0A0A0MT08 1334 aa25.6■■□□□ 1.69
CPNE1-219ENST00000440240 GPR75-ASB3A0A0A6YYF3 556 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms