RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 FAM155AB1AL88 458 aaPredicted RBP10.6□□□□□ -0.71
HERPUD2-206ENST00000438224 MMP14P50281 582 aa10.6□□□□□ -0.71
HERPUD2-206ENST00000438224 TIMM10P62072 90 aa10.6□□□□□ -0.71
HERPUD2-206ENST00000438224 CAVIN4Q5BKX8 364 aa10.6□□□□□ -0.71
HERPUD2-206ENST00000438224 VPS37DQ86XT2 251 aa10.6□□□□□ -0.71
HERPUD2-206ENST00000438224 SSH3Q8TE77 659 aa10.6□□□□□ -0.71
HERPUD2-206ENST00000438224 DDRGK1Q96HY6 314 aa10.6□□□□□ -0.71
HERPUD2-206ENST00000438224 HHIPL1Q96JK4 782 aa10.6□□□□□ -0.71
HERPUD2-206ENST00000438224 WBP1LQ9NX94 342 aa10.6□□□□□ -0.71
HERPUD2-206ENST00000438224 RCAN3Q9UKA8 241 aa10.6□□□□□ -0.71
HERPUD2-206ENST00000438224 FZD1Q9UP38 647 aa10.6□□□□□ -0.71
HERPUD2-206ENST00000438224 A0A1B0GUL7 405 aa10.59□□□□□ -0.71
HERPUD2-206ENST00000438224 CRKP46108 304 aa10.59□□□□□ -0.71
HERPUD2-206ENST00000438224 ATP8B2P98198 1209 aa10.59□□□□□ -0.71
HERPUD2-206ENST00000438224 C20orf194Q5TEA3 1177 aa10.59□□□□□ -0.71
HERPUD2-206ENST00000438224 CDAN1Q8IWY9 1227 aa10.59□□□□□ -0.71
HERPUD2-206ENST00000438224 TDRD3Q9H7E2 651 aaKnown RBP10.59□□□□□ -0.71
HERPUD2-206ENST00000438224 FRAT2O75474 233 aaPredicted RBP10.58□□□□□ -0.72
HERPUD2-206ENST00000438224 PRDX5P30044 214 aa10.58□□□□□ -0.72
HERPUD2-206ENST00000438224 RASGRF1Q13972 1273 aa10.58□□□□□ -0.72
HERPUD2-206ENST00000438224 COL13A1Q5TAT6 717 aaPredicted RBP10.58□□□□□ -0.72
HERPUD2-206ENST00000438224 CCDC102BQ68D86 513 aa10.58□□□□□ -0.72
HERPUD2-206ENST00000438224 CEP85Q6P2H3 762 aa10.58□□□□□ -0.72
HERPUD2-206ENST00000438224 APOBEC3FQ8IUX4 373 aaKnown RBP10.58□□□□□ -0.72
HERPUD2-206ENST00000438224 C2orf69Q8N8R5 385 aa10.58□□□□□ -0.72
HERPUD2-206ENST00000438224 TBC1D22AQ8WUA7 517 aa10.58□□□□□ -0.72
HERPUD2-206ENST00000438224 XAGE2Q96GT9 111 aa10.58□□□□□ -0.72
HERPUD2-206ENST00000438224 DEFB129Q9H1M3 183 aa10.58□□□□□ -0.72
HERPUD2-206ENST00000438224 ZNF70Q9UC06 446 aaPredicted RBP10.58□□□□□ -0.72
HERPUD2-206ENST00000438224 SERPINA10Q9UK55 444 aa10.58□□□□□ -0.72
HERPUD2-206ENST00000438224 COG6Q9Y2V7 657 aa10.58□□□□□ -0.72
HERPUD2-206ENST00000438224 MAST2Q6P0Q8 1798 aa10.57□□□□□ -0.72
HERPUD2-206ENST00000438224 DOCK2Q92608 1830 aa10.57□□□□□ -0.72
HERPUD2-206ENST00000438224 UBE2Q2LH0YL09 131 aa10.57□□□□□ -0.72
HERPUD2-206ENST00000438224 ECE1P42892 770 aa10.57□□□□□ -0.72
HERPUD2-206ENST00000438224 RBM5P52756 815 aaKnown RBP eCLIP10.57□□□□□ -0.72
HERPUD2-206ENST00000438224 CACNB3P54284 484 aa10.57□□□□□ -0.72
HERPUD2-206ENST00000438224 MVPQ14764 893 aaKnown RBP10.57□□□□□ -0.72
HERPUD2-206ENST00000438224 RGMBQ6NW40 437 aa10.57□□□□□ -0.72
HERPUD2-206ENST00000438224 PI16Q6UXB8 463 aa10.57□□□□□ -0.72
HERPUD2-206ENST00000438224 VEZTQ9HBM0 779 aa10.57□□□□□ -0.72
HERPUD2-206ENST00000438224 SLC10A3P09131 477 aa10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 HSPA8P11142 646 aaKnown RBP10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 HDLBPQ00341 1268 aaKnown RBP10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 PRKG1Q13976 671 aa10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 RASA3Q14644 834 aa10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 DIXDC1Q155Q3 683 aa10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 NBPF12Q5TAG4 269 aaPredicted RBP10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 LHX8Q68G74 356 aa10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 APOBEC3HQ6NTF7 200 aaKnown RBP10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 RASAL3Q86YV0 1011 aa10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 SIRT2Q8IXJ6 389 aa10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 WDR66Q8TBY9 1149 aa10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 ZNF384Q8TF68 577 aa10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 TEPSINQ96N21 525 aa10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 NOP58Q9Y2X3 529 aaKnown RBP10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 DAGLAQ9Y4D2 1042 aa10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 FOCADQ5VW36 1801 aa10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 SALL1Q9NSC2 1324 aa10.56□□□□□ -0.72
HERPUD2-206ENST00000438224 TCP10L2B9ZVM9 353 aa10.55□□□□□ -0.72
HERPUD2-206ENST00000438224 SURF6O75683 361 aaKnown RBP10.55□□□□□ -0.72
HERPUD2-206ENST00000438224 MAP2K2P36507 400 aa10.55□□□□□ -0.72
HERPUD2-206ENST00000438224 ZNF157P51786 506 aaPredicted RBP10.55□□□□□ -0.72
HERPUD2-206ENST00000438224 FKBP1BP68106 108 aa10.55□□□□□ -0.72
HERPUD2-206ENST00000438224 G3BP1Q13283 466 aaKnown RBP eCLIP10.55□□□□□ -0.72
HERPUD2-206ENST00000438224 IFNL1Q8IU54 200 aa10.55□□□□□ -0.72
HERPUD2-206ENST00000438224 TEKT1Q969V4 418 aa10.55□□□□□ -0.72
HERPUD2-206ENST00000438224 ZDHHC15Q96MV8 337 aa10.55□□□□□ -0.72
HERPUD2-206ENST00000438224 NEUROD6Q96NK8 337 aa10.55□□□□□ -0.72
HERPUD2-206ENST00000438224 DBNDD2Q9BQY9 259 aa10.55□□□□□ -0.72
HERPUD2-206ENST00000438224 ZBTB40Q9NUA8 1239 aa10.55□□□□□ -0.72
HERPUD2-206ENST00000438224 TLR7Q9NYK1 1049 aaKnown RBP10.55□□□□□ -0.72
HERPUD2-206ENST00000438224 TSKSQ9UJT2 592 aa10.55□□□□□ -0.72
HERPUD2-206ENST00000438224 AKAP2Q9Y2D5 859 aa10.55□□□□□ -0.72
HERPUD2-206ENST00000438224 SUGT1Q9Y2Z0 365 aa10.55□□□□□ -0.72
HERPUD2-206ENST00000438224 MYO1BO43795 1136 aa10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 ARID4AP29374 1257 aaPredicted RBP10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 MCAMP43121 646 aa10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 LBX1P52954 281 aa10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 KIF23Q02241 960 aaPredicted RBP10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 NOGQ13253 232 aa10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 TNNI3KQ59H18 835 aa10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 LDLRAD1Q5T700 205 aa10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 HHIPL2Q6UWX4 724 aa10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 MS4A4AQ96JQ5 239 aa10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 MRIQ9BWK5 157 aa10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 TMEM39BQ9GZU3 492 aa10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 GNL3LQ9NVN8 582 aaKnown RBP10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 HMG20BQ9P0W2 317 aa10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 DENND2AQ9ULE3 1009 aa10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 EXOC6BQ9Y2D4 811 aa10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 FPGT-TNNI3KV9GXZ4 949 aa10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 PDS5AQ29RF7 1337 aaKnown RBP10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 SIPA1L1O43166 1804 aa10.54□□□□□ -0.72
HERPUD2-206ENST00000438224 RFX7Q2KHR2 1363 aa10.53□□□□□ -0.72
HERPUD2-206ENST00000438224 GPR37O15354 613 aa10.53□□□□□ -0.72
HERPUD2-206ENST00000438224 USP2O75604 605 aaPredicted RBP10.53□□□□□ -0.72
HERPUD2-206ENST00000438224 CTCFP49711 727 aaPredicted RBP10.53□□□□□ -0.72
HERPUD2-206ENST00000438224 MAP2K1Q02750 393 aaPredicted RBP10.53□□□□□ -0.72
HERPUD2-206ENST00000438224 TTLL12Q14166 644 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms