RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 CCDC50Q8IVM0 306 aa8.34□□□□□ -1.07
GARNL3-205ENST00000435213 SAMD3Q8N6K7 520 aa8.34□□□□□ -1.07
GARNL3-205ENST00000435213 RBM17Q96I25 401 aaKnown RBP8.34□□□□□ -1.07
GARNL3-205ENST00000435213 RSRC1Q96IZ7 334 aaKnown RBP8.34□□□□□ -1.07
GARNL3-205ENST00000435213 TRAIPQ9BWF2 469 aa8.34□□□□□ -1.07
GARNL3-205ENST00000435213 TRIM4Q9C037 500 aa8.34□□□□□ -1.07
GARNL3-205ENST00000435213 IL25Q9H293 177 aa8.34□□□□□ -1.07
GARNL3-205ENST00000435213 ORC3Q9UBD5 711 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-205ENST00000435213 KRT85P78386 507 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 ARHGAP22Q7Z5H3 698 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 CNTROBQ8N137 903 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 TM6SF1Q9BZW5 370 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 ZRANB1Q9UGI0 708 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 THRAP3Q9Y2W1 955 aaKnown RBP8.33□□□□□ -1.08
GARNL3-205ENST00000435213 TTC21BQ7Z4L5 1316 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 OVOS2A0A0J9YW53 1432 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 OVOS2Q6IE36 1432 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 NYAP1Q6ZVC0 841 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 HYPKQ9NX55 129 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 TTC21AQ8NDW8 1320 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 USP42Q9H9J4 1324 aaKnown RBP8.33□□□□□ -1.08
GARNL3-205ENST00000435213 NUTM2FA1L443 756 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 ENO4A6NNW6 628 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 CAVIN2O95810 425 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 ZNF75DP51815 510 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 AKNAD1Q5T1N1 836 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 GORABQ5T7V8 394 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 ZSCAN25Q6NSZ9 544 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 RBM43Q6ZSC3 357 aaKnown RBP8.33□□□□□ -1.08
GARNL3-205ENST00000435213 MAB21L3Q8N8X9 362 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 PI4K2BQ8TCG2 481 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 SSH3Q8TE77 659 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 PICK1Q9NRD5 415 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 DDX19AQ9NUU7 478 aaKnown RBP8.33□□□□□ -1.08
GARNL3-205ENST00000435213 TSPYL4Q9UJ04 414 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.33□□□□□ -1.08
GARNL3-205ENST00000435213 MAP3K5Q99683 1374 aa8.33□□□□□ -1.08
GARNL3-205ENST00000435213 ZBED6P86452 979 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 USP4Q13107 963 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 KIAA0825Q8IV33 1275 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 TSPYL2Q9H2G4 693 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-205ENST00000435213 TESPA1A2RU30 521 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-205ENST00000435213 FESP07332 822 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 FLT3P36888 993 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 FLIIQ13045 1269 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 SFMBT2Q5VUG0 894 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 CC2D1AQ6P1N0 951 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-205ENST00000435213 AMOTL1Q8IY63 956 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 ELOA2Q8IYF1 753 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-205ENST00000435213 DTNBP1Q96EV8 351 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 FAM200BP0CF97 657 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 KCNB1Q14721 858 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 CEP85LQ5SZL2 805 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 WAPLQ7Z5K2 1190 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 CCDC83Q8IWF9 413 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 RASEFQ8IZ41 740 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 RUFY2Q8WXA3 655 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 FAM81BQ96LP2 452 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 CBX8Q9HC52 389 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 TECPR2O15040 1411 aa8.32□□□□□ -1.08
GARNL3-205ENST00000435213 A2ML1A8K2U0 1454 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 EXOC5O00471 708 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 LARGE1O95461 756 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 PDCP20941 246 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 OR8K1Q8NGG5 319 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 NUDT16Q96DE0 195 aaKnown RBP8.31□□□□□ -1.08
GARNL3-205ENST00000435213 RUFY1Q96T51 708 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 TNMDQ9H2S6 317 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 FAM169AQ9Y6X4 670 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 SLIT1O75093 1534 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 USP54Q70EL1 1684 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 KDRP35968 1356 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 KDM4FA0A1W2PPD8 638 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 XBP1P17861 261 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 POLA2Q14181 598 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 CAPRIN2Q6IMN6 1127 aaKnown RBP8.31□□□□□ -1.08
GARNL3-205ENST00000435213 TTC6Q86TZ1 520 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 LUZP1Q86V48 1076 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 RNF168Q8IYW5 571 aaPredicted RBP8.31□□□□□ -1.08
GARNL3-205ENST00000435213 LMBR1Q8WVP7 490 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 SCAND2PQ9GZW5 306 aaPredicted RBP8.31□□□□□ -1.08
GARNL3-205ENST00000435213 CLSTN2Q9H4D0 955 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 ATP6V0A4Q9HBG4 840 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 ZSWIM6Q9HCJ5 1215 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 CYP46A1Q9Y6A2 500 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 CAPN7Q9Y6W3 813 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 U3KPZ7 1027 aaPredicted RBP8.31□□□□□ -1.08
GARNL3-205ENST00000435213 DIP2AQ14689 1571 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 TTC41PQ6P2S7 1318 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 NPHP3Q7Z494 1330 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 VPS37CA5D8V6 355 aaPredicted RBP8.31□□□□□ -1.08
GARNL3-205ENST00000435213 F8VZ95 297 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 SEC31AO94979 1220 aaKnown RBP8.31□□□□□ -1.08
GARNL3-205ENST00000435213 UBTFL1P0CB47 393 aaPredicted RBP8.31□□□□□ -1.08
GARNL3-205ENST00000435213 LRMPQ12912 555 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 G3BP1Q13283 466 aaKnown RBP eCLIP8.31□□□□□ -1.08
GARNL3-205ENST00000435213 ANO6Q4KMQ2 910 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 CWF19L1Q69YN2 538 aaKnown RBP8.31□□□□□ -1.08
GARNL3-205ENST00000435213 SCLT1Q96NL6 688 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 ALS2CR12Q96Q35 445 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms