RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 ZNF341Q9BYN7 854 aa18.48■□□□□ 0.55
RPUSD3-208ENST00000433972 SALL1Q9NSC2 1324 aa18.48■□□□□ 0.55
RPUSD3-208ENST00000433972 SLC34A2O95436 690 aa18.47■□□□□ 0.55
RPUSD3-208ENST00000433972 SNAPC2Q13487 334 aa18.47■□□□□ 0.55
RPUSD3-208ENST00000433972 PRPF38BQ5VTL8 546 aaKnown RBP18.47■□□□□ 0.55
RPUSD3-208ENST00000433972 SLF2Q8IX21 1173 aa18.47■□□□□ 0.55
RPUSD3-208ENST00000433972 CD99L2Q8TCZ2 262 aa18.47■□□□□ 0.55
RPUSD3-208ENST00000433972 BRI3BPQ8WY22 251 aa18.47■□□□□ 0.55
RPUSD3-208ENST00000433972 COPRSQ9NQ92 184 aa18.47■□□□□ 0.55
RPUSD3-208ENST00000433972 PTPN22Q9Y2R2 807 aa18.47■□□□□ 0.55
RPUSD3-208ENST00000433972 LRRFIP2Q9Y608 721 aaKnown RBP18.47■□□□□ 0.55
RPUSD3-208ENST00000433972 ZBED9Q6R2W3 1325 aa18.47■□□□□ 0.55
RPUSD3-208ENST00000433972 IPO8O15397 1037 aaKnown RBP18.46■□□□□ 0.55
RPUSD3-208ENST00000433972 PPIL2Q13356 520 aa18.46■□□□□ 0.55
RPUSD3-208ENST00000433972 AKAP2Q9Y2D5 859 aa18.46■□□□□ 0.55
RPUSD3-208ENST00000433972 SNCAIPQ9Y6H5 919 aa18.46■□□□□ 0.55
RPUSD3-208ENST00000433972 RARSP54136 660 aaKnown RBP18.45■□□□□ 0.54
RPUSD3-208ENST00000433972 PPATQ06203 517 aa18.45■□□□□ 0.54
RPUSD3-208ENST00000433972 KIF22Q14807 665 aa18.45■□□□□ 0.54
RPUSD3-208ENST00000433972 CNKSR2Q8WXI2 1034 aa18.45■□□□□ 0.54
RPUSD3-208ENST00000433972 DAGLAQ9Y4D2 1042 aa18.45■□□□□ 0.54
RPUSD3-208ENST00000433972 PRDX5P30044 214 aa18.44■□□□□ 0.54
RPUSD3-208ENST00000433972 NBPF11Q86T75 865 aa18.44■□□□□ 0.54
RPUSD3-208ENST00000433972 PDS5AQ29RF7 1337 aaKnown RBP18.44■□□□□ 0.54
RPUSD3-208ENST00000433972 OTOFQ9HC10 1997 aa18.43■□□□□ 0.54
RPUSD3-208ENST00000433972 SPTY2D1Q68D10 685 aaPredicted RBP18.43■□□□□ 0.54
RPUSD3-208ENST00000433972 CDC42EP5Q6NZY7 148 aa18.43■□□□□ 0.54
RPUSD3-208ENST00000433972 ZKSCAN4Q969J2 545 aaPredicted RBP18.43■□□□□ 0.54
RPUSD3-208ENST00000433972 MEIS3Q99687 375 aa18.43■□□□□ 0.54
RPUSD3-208ENST00000433972 IRF6O14896 467 aa18.42■□□□□ 0.54
RPUSD3-208ENST00000433972 SRGAP3O43295 1099 aa18.42■□□□□ 0.54
RPUSD3-208ENST00000433972 TLR2O60603 784 aa18.42■□□□□ 0.54
RPUSD3-208ENST00000433972 GNRH1P01148 92 aa18.42■□□□□ 0.54
RPUSD3-208ENST00000433972 PHKA1P46020 1223 aa18.42■□□□□ 0.54
RPUSD3-208ENST00000433972 MVPQ14764 893 aaKnown RBP18.42■□□□□ 0.54
RPUSD3-208ENST00000433972 DIXDC1Q155Q3 683 aa18.42■□□□□ 0.54
RPUSD3-208ENST00000433972 CCDC102BQ68D86 513 aa18.42■□□□□ 0.54
RPUSD3-208ENST00000433972 DZIP1Q86YF9 867 aaKnown RBP18.42■□□□□ 0.54
RPUSD3-208ENST00000433972 FAM43AQ8N2R8 423 aa18.42■□□□□ 0.54
RPUSD3-208ENST00000433972 ARMC5Q96C12 935 aa18.42■□□□□ 0.54
RPUSD3-208ENST00000433972 USP40Q9NVE5 1235 aa18.42■□□□□ 0.54
RPUSD3-208ENST00000433972 TNRC18O15417 2968 aaPredicted RBP18.41■□□□□ 0.54
RPUSD3-208ENST00000433972 TCP10Q12799 353 aa18.41■□□□□ 0.54
RPUSD3-208ENST00000433972 MTX1Q13505 466 aa18.41■□□□□ 0.54
RPUSD3-208ENST00000433972 MIGA2Q7L4E1 593 aa18.41■□□□□ 0.54
RPUSD3-208ENST00000433972 ZNF112Q9UJU3 913 aa18.41■□□□□ 0.54
RPUSD3-208ENST00000433972 PA2G4Q9UQ80 394 aaKnown RBP18.41■□□□□ 0.54
RPUSD3-208ENST00000433972 BTBD19C9JJ37 291 aa18.4■□□□□ 0.54
RPUSD3-208ENST00000433972 ENTPD3O75355 529 aa18.4■□□□□ 0.54
RPUSD3-208ENST00000433972 PRMT2P55345 433 aa18.4■□□□□ 0.54
RPUSD3-208ENST00000433972 SLC9C1Q4G0N8 1177 aa18.4■□□□□ 0.54
RPUSD3-208ENST00000433972 NOL9Q5SY16 702 aaKnown RBP18.4■□□□□ 0.54
RPUSD3-208ENST00000433972 TMEM106CQ9BVX2 250 aa18.4■□□□□ 0.54
RPUSD3-208ENST00000433972 ANKRD23Q86SG2 305 aa18.39■□□□□ 0.53
RPUSD3-208ENST00000433972 IDI2Q9BXS1 227 aa18.39■□□□□ 0.53
RPUSD3-208ENST00000433972 ABCF2Q9UG63 623 aa18.39■□□□□ 0.53
RPUSD3-208ENST00000433972 GAKO14976 1311 aa18.39■□□□□ 0.53
RPUSD3-208ENST00000433972 A0A1B0GUL7 405 aa18.38■□□□□ 0.53
RPUSD3-208ENST00000433972 GNAI2P04899 355 aa18.38■□□□□ 0.53
RPUSD3-208ENST00000433972 INPP5BP32019 993 aa18.38■□□□□ 0.53
RPUSD3-208ENST00000433972 LACTBP83111 547 aaPredicted RBP18.38■□□□□ 0.53
RPUSD3-208ENST00000433972 NFIAQ12857 509 aa18.38■□□□□ 0.53
RPUSD3-208ENST00000433972 ATF7IPQ6VMQ6 1270 aa18.38■□□□□ 0.53
RPUSD3-208ENST00000433972 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.38■□□□□ 0.53
RPUSD3-208ENST00000433972 GCC1Q96CN9 775 aa18.38■□□□□ 0.53
RPUSD3-208ENST00000433972 FAM163AQ96GL9 167 aaPredicted RBP18.38■□□□□ 0.53
RPUSD3-208ENST00000433972 FAM198AQ9UFP1 575 aa18.38■□□□□ 0.53
RPUSD3-208ENST00000433972 KCNH4Q9UQ05 1017 aa18.38■□□□□ 0.53
RPUSD3-208ENST00000433972 TIMM10P62072 90 aa18.37■□□□□ 0.53
RPUSD3-208ENST00000433972 RASGRF1Q13972 1273 aa18.37■□□□□ 0.53
RPUSD3-208ENST00000433972 GORABQ5T7V8 394 aa18.37■□□□□ 0.53
RPUSD3-208ENST00000433972 ZSCAN29Q8IWY8 852 aaPredicted RBP18.37■□□□□ 0.53
RPUSD3-208ENST00000433972 XAGE2Q96GT9 111 aa18.37■□□□□ 0.53
RPUSD3-208ENST00000433972 PICK1Q9NRD5 415 aa18.37■□□□□ 0.53
RPUSD3-208ENST00000433972 HTTP42858 3142 aa18.37■□□□□ 0.53
RPUSD3-208ENST00000433972 CXCL11O14625 94 aa18.36■□□□□ 0.53
RPUSD3-208ENST00000433972 MAP4K4O95819 1239 aaPredicted RBP18.36■□□□□ 0.53
RPUSD3-208ENST00000433972 HOXD10P28358 340 aa18.36■□□□□ 0.53
RPUSD3-208ENST00000433972 ADORA1P30542 326 aa18.36■□□□□ 0.53
RPUSD3-208ENST00000433972 GSTO1P78417 241 aa18.36■□□□□ 0.53
RPUSD3-208ENST00000433972 TFCP2Q12800 502 aa18.36■□□□□ 0.53
RPUSD3-208ENST00000433972 ERICH6Q7L0X2 663 aa18.36■□□□□ 0.53
RPUSD3-208ENST00000433972 ZNF333Q96JL9 665 aa18.36■□□□□ 0.53
RPUSD3-208ENST00000433972 PARK7Q99497 189 aaKnown RBP18.36■□□□□ 0.53
RPUSD3-208ENST00000433972 MYH13Q9UKX3 1938 aa18.36■□□□□ 0.53
RPUSD3-208ENST00000433972 MROH7-TTC4A0A0A0MT08 1334 aa18.35■□□□□ 0.53
RPUSD3-208ENST00000433972 PDHXO00330 501 aa18.35■□□□□ 0.53
RPUSD3-208ENST00000433972 LDHCP07864 332 aa18.35■□□□□ 0.53
RPUSD3-208ENST00000433972 TRIM27P14373 513 aa18.35■□□□□ 0.53
RPUSD3-208ENST00000433972 RGS3P49796 1198 aa18.35■□□□□ 0.53
RPUSD3-208ENST00000433972 G3BP1Q13283 466 aaKnown RBP eCLIP18.35■□□□□ 0.53
RPUSD3-208ENST00000433972 FASTKD5Q7L8L6 764 aaKnown RBP18.35■□□□□ 0.53
RPUSD3-208ENST00000433972 SCYL3Q8IZE3 742 aa18.35■□□□□ 0.53
RPUSD3-208ENST00000433972 FRAT1Q92837 279 aaPredicted RBP18.35■□□□□ 0.53
RPUSD3-208ENST00000433972 NEUROD6Q96NK8 337 aa18.35■□□□□ 0.53
RPUSD3-208ENST00000433972 PTCH2Q9Y6C5 1203 aa18.35■□□□□ 0.53
RPUSD3-208ENST00000433972 POTEFA5A3E0 1075 aa18.34■□□□□ 0.53
RPUSD3-208ENST00000433972 BTDP43251 543 aa18.34■□□□□ 0.53
RPUSD3-208ENST00000433972 C17orf99Q6UX52 265 aa18.34■□□□□ 0.53
RPUSD3-208ENST00000433972 PDE4DIPQ5VU43 2346 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms