RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 CLRN2A0PK11 232 aa11.83□□□□□ -0.52
CDC42-IT1-201ENST00000431803 MYO1BO43795 1136 aa11.83□□□□□ -0.52
CDC42-IT1-201ENST00000431803 PDE4AP27815 886 aa11.83□□□□□ -0.52
CDC42-IT1-201ENST00000431803 LRRC24Q50LG9 513 aa11.83□□□□□ -0.52
CDC42-IT1-201ENST00000431803 FBXO33Q7Z6M2 555 aa11.83□□□□□ -0.52
CDC42-IT1-201ENST00000431803 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
CDC42-IT1-201ENST00000431803 SERPINA10Q9UK55 444 aa11.83□□□□□ -0.52
CDC42-IT1-201ENST00000431803 ANGEL1Q9UNK9 670 aaKnown RBP11.83□□□□□ -0.52
CDC42-IT1-201ENST00000431803 PDE8BO95263 885 aa11.82□□□□□ -0.52
CDC42-IT1-201ENST00000431803 SREBF2Q12772 1141 aa11.82□□□□□ -0.52
CDC42-IT1-201ENST00000431803 PRKG1Q13976 671 aa11.82□□□□□ -0.52
CDC42-IT1-201ENST00000431803 NOM1Q5C9Z4 860 aaKnown RBP11.82□□□□□ -0.52
CDC42-IT1-201ENST00000431803 METTL24Q5JXM2 366 aa11.82□□□□□ -0.52
CDC42-IT1-201ENST00000431803 SPRYD7Q5W111 196 aa11.82□□□□□ -0.52
CDC42-IT1-201ENST00000431803 SPRYD3Q8NCJ5 442 aa11.82□□□□□ -0.52
CDC42-IT1-201ENST00000431803 CFHR5Q9BXR6 569 aa11.82□□□□□ -0.52
CDC42-IT1-201ENST00000431803 TTF2Q9UNY4 1162 aaKnown RBP11.82□□□□□ -0.52
CDC42-IT1-201ENST00000431803 FZD1Q9UP38 647 aa11.82□□□□□ -0.52
CDC42-IT1-201ENST00000431803 PCDHGA4Q9Y5G9 962 aa11.82□□□□□ -0.52
CDC42-IT1-201ENST00000431803 KIF16BQ96L93 1317 aa11.82□□□□□ -0.52
CDC42-IT1-201ENST00000431803 UNCXA6NJT0 531 aa11.81□□□□□ -0.52
CDC42-IT1-201ENST00000431803 PPP1R12BO60237 982 aaPredicted RBP11.81□□□□□ -0.52
CDC42-IT1-201ENST00000431803 CT47B1P0C2W7 299 aaPredicted RBP11.81□□□□□ -0.52
CDC42-IT1-201ENST00000431803 SUPT20HL1Q3ZLR7 823 aa11.81□□□□□ -0.52
CDC42-IT1-201ENST00000431803 CTU1Q7Z7A3 348 aaKnown RBP11.81□□□□□ -0.52
CDC42-IT1-201ENST00000431803 KLHDC4Q8TBB5 520 aa11.81□□□□□ -0.52
CDC42-IT1-201ENST00000431803 VEZTQ9HBM0 779 aa11.81□□□□□ -0.52
CDC42-IT1-201ENST00000431803 PLSCR2Q9NRY7 297 aa11.81□□□□□ -0.52
CDC42-IT1-201ENST00000431803 SMC4Q9NTJ3 1288 aa11.81□□□□□ -0.52
CDC42-IT1-201ENST00000431803 TBC1D8O95759 1140 aa11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 NUDT7P0C024 238 aa11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 ZBTB48P10074 688 aaPredicted RBP11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 FGFR2P21802 821 aa11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 CRKP46108 304 aa11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 RFX5P48382 616 aaPredicted RBP11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 RBM5P52756 815 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 TNFAIP1Q13829 316 aa11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 RASA3Q14644 834 aa11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 GRIK5Q16478 980 aa11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 CAVIN4Q5BKX8 364 aa11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 VARS2Q5ST30 1063 aaKnown RBP11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 NBPF12Q5TAG4 269 aaPredicted RBP11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 VPS37DQ86XT2 251 aa11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 DZIP1LQ8IYY4 767 aaKnown RBP11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 ZNF296Q8WUU4 475 aaPredicted RBP11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 CLMNQ96JQ2 1002 aa11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 ZNF70Q9UC06 446 aaPredicted RBP11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 CENPFP49454 3210 aa11.8□□□□□ -0.52
CDC42-IT1-201ENST00000431803 HDLBPQ00341 1268 aaKnown RBP11.79□□□□□ -0.52
CDC42-IT1-201ENST00000431803 MLLT1Q03111 559 aaPredicted RBP11.79□□□□□ -0.52
CDC42-IT1-201ENST00000431803 PUM3Q15397 648 aaKnown RBP11.79□□□□□ -0.52
CDC42-IT1-201ENST00000431803 PPP1R15BQ5SWA1 713 aa11.79□□□□□ -0.52
CDC42-IT1-201ENST00000431803 TBC1D22AQ8WUA7 517 aa11.79□□□□□ -0.52
CDC42-IT1-201ENST00000431803 WNK4Q96J92 1243 aa11.79□□□□□ -0.52
CDC42-IT1-201ENST00000431803 TEPSINQ96N21 525 aa11.79□□□□□ -0.52
CDC42-IT1-201ENST00000431803 TDRD3Q9H7E2 651 aaKnown RBP11.79□□□□□ -0.52
CDC42-IT1-201ENST00000431803 IQSEC3Q9UPP2 1182 aaPredicted RBP11.79□□□□□ -0.52
CDC42-IT1-201ENST00000431803 OTOFQ9HC10 1997 aa11.79□□□□□ -0.52
CDC42-IT1-201ENST00000431803 MANSC4A6NHS7 340 aaPredicted RBP11.78□□□□□ -0.52
CDC42-IT1-201ENST00000431803 CCER2I3L3R5 266 aa11.78□□□□□ -0.52
CDC42-IT1-201ENST00000431803 GPR25O00155 361 aa11.78□□□□□ -0.52
CDC42-IT1-201ENST00000431803 EYA2O00167 538 aa11.78□□□□□ -0.52
CDC42-IT1-201ENST00000431803 USP2O75604 605 aaPredicted RBP11.78□□□□□ -0.52
CDC42-IT1-201ENST00000431803 IREB2P48200 963 aaKnown RBP11.78□□□□□ -0.52
CDC42-IT1-201ENST00000431803 BCAMP50895 628 aa11.78□□□□□ -0.52
CDC42-IT1-201ENST00000431803 INHBEP58166 350 aa11.78□□□□□ -0.52
CDC42-IT1-201ENST00000431803 ATG9AQ7Z3C6 839 aa11.78□□□□□ -0.52
CDC42-IT1-201ENST00000431803 SLC10A4Q96EP9 437 aa11.78□□□□□ -0.52
CDC42-IT1-201ENST00000431803 LARP6Q9BRS8 491 aaKnown RBP11.78□□□□□ -0.52
CDC42-IT1-201ENST00000431803 R3HDMLQ9H3Y0 253 aa11.78□□□□□ -0.52
CDC42-IT1-201ENST00000431803 ALDH1A1P00352 501 aa11.77□□□□□ -0.53
CDC42-IT1-201ENST00000431803 IFIT1P09914 478 aaKnown RBP11.77□□□□□ -0.53
CDC42-IT1-201ENST00000431803 GJA5P36382 358 aa11.77□□□□□ -0.53
CDC42-IT1-201ENST00000431803 CHAF1AQ13111 956 aaPredicted RBP11.77□□□□□ -0.53
CDC42-IT1-201ENST00000431803 PKN2Q16513 984 aaKnown RBP11.77□□□□□ -0.53
CDC42-IT1-201ENST00000431803 ANKRD13AQ8IZ07 590 aa11.77□□□□□ -0.53
CDC42-IT1-201ENST00000431803 MRIQ9BWK5 157 aa11.77□□□□□ -0.53
CDC42-IT1-201ENST00000431803 NOB1Q9ULX3 412 aaKnown RBP11.77□□□□□ -0.53
CDC42-IT1-201ENST00000431803 SUGT1Q9Y2Z0 365 aa11.77□□□□□ -0.53
CDC42-IT1-201ENST00000431803 IGF2BP3O00425 579 aaKnown RBP eCLIP11.76□□□□□ -0.53
CDC42-IT1-201ENST00000431803 FRAT2O75474 233 aaPredicted RBP11.76□□□□□ -0.53
CDC42-IT1-201ENST00000431803 CIAO1O76071 339 aa11.76□□□□□ -0.53
CDC42-IT1-201ENST00000431803 UBTFL1P0CB47 393 aaPredicted RBP11.76□□□□□ -0.53
CDC42-IT1-201ENST00000431803 PTCD2Q8WV60 388 aaKnown RBP11.76□□□□□ -0.53
CDC42-IT1-201ENST00000431803 LPIN2Q92539 896 aa11.76□□□□□ -0.53
CDC42-IT1-201ENST00000431803 TEKT1Q969V4 418 aa11.76□□□□□ -0.53
CDC42-IT1-201ENST00000431803 ZDHHC15Q96MV8 337 aa11.76□□□□□ -0.53
CDC42-IT1-201ENST00000431803 TMEM39BQ9GZU3 492 aa11.76□□□□□ -0.53
CDC42-IT1-201ENST00000431803 HPS5Q9UPZ3 1129 aa11.76□□□□□ -0.53
CDC42-IT1-201ENST00000431803 TESPA1A2RU30 521 aaPredicted RBP11.75□□□□□ -0.53
CDC42-IT1-201ENST00000431803 TCP10L2B9ZVM9 353 aa11.75□□□□□ -0.53
CDC42-IT1-201ENST00000431803 FKTNO75072 461 aa11.75□□□□□ -0.53
CDC42-IT1-201ENST00000431803 SLC5A1P13866 664 aa11.75□□□□□ -0.53
CDC42-IT1-201ENST00000431803 TNNI2P48788 182 aa11.75□□□□□ -0.53
CDC42-IT1-201ENST00000431803 RARSP54136 660 aaKnown RBP11.75□□□□□ -0.53
CDC42-IT1-201ENST00000431803 FKBP1CQ5VVH2 108 aa11.75□□□□□ -0.53
CDC42-IT1-201ENST00000431803 APOBEC3HQ6NTF7 200 aaKnown RBP11.75□□□□□ -0.53
CDC42-IT1-201ENST00000431803 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.75□□□□□ -0.53
CDC42-IT1-201ENST00000431803 DDX27Q96GQ7 796 aaKnown RBP11.75□□□□□ -0.53
CDC42-IT1-201ENST00000431803 API5Q9BZZ5 524 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms