RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 PTPN22Q9Y2R2 807 aa18.54■□□□□ 0.56
MSH5-208ENST00000429846 AK9Q5TCS8 1911 aa18.54■□□□□ 0.56
MSH5-208ENST00000429846 CETPP11597 493 aa18.53■□□□□ 0.56
MSH5-208ENST00000429846 ARHGEF6Q15052 776 aa18.53■□□□□ 0.56
MSH5-208ENST00000429846 PRPF38BQ5VTL8 546 aaKnown RBP18.53■□□□□ 0.56
MSH5-208ENST00000429846 FAM151AQ8WW52 585 aa18.53■□□□□ 0.56
MSH5-208ENST00000429846 ARHGAP45Q92619 1136 aa18.53■□□□□ 0.56
MSH5-208ENST00000429846 COPRSQ9NQ92 184 aa18.53■□□□□ 0.56
MSH5-208ENST00000429846 DENND2AQ9ULE3 1009 aa18.53■□□□□ 0.56
MSH5-208ENST00000429846 DAGLAQ9Y4D2 1042 aa18.53■□□□□ 0.56
MSH5-208ENST00000429846 LRRFIP2Q9Y608 721 aaKnown RBP18.53■□□□□ 0.56
MSH5-208ENST00000429846 LDHBP07195 334 aaKnown RBP18.52■□□□□ 0.56
MSH5-208ENST00000429846 PRDX5P30044 214 aa18.52■□□□□ 0.56
MSH5-208ENST00000429846 PPIL2Q13356 520 aa18.52■□□□□ 0.56
MSH5-208ENST00000429846 SNAPC2Q13487 334 aa18.52■□□□□ 0.56
MSH5-208ENST00000429846 ZGPATQ8N5A5 531 aaKnown RBP18.52■□□□□ 0.56
MSH5-208ENST00000429846 ZNF341Q9BYN7 854 aa18.52■□□□□ 0.56
MSH5-208ENST00000429846 DOCK2Q92608 1830 aa18.51■□□□□ 0.55
MSH5-208ENST00000429846 MYH2Q9UKX2 1941 aa18.51■□□□□ 0.55
MSH5-208ENST00000429846 RARSP54136 660 aaKnown RBP18.51■□□□□ 0.55
MSH5-208ENST00000429846 FAM43AQ8N2R8 423 aa18.51■□□□□ 0.55
MSH5-208ENST00000429846 ZKSCAN4Q969J2 545 aaPredicted RBP18.51■□□□□ 0.55
MSH5-208ENST00000429846 PDS5AQ29RF7 1337 aaKnown RBP18.5■□□□□ 0.55
MSH5-208ENST00000429846 IRF6O14896 467 aa18.5■□□□□ 0.55
MSH5-208ENST00000429846 GNAI3P08754 354 aa18.5■□□□□ 0.55
MSH5-208ENST00000429846 PPATQ06203 517 aa18.5■□□□□ 0.55
MSH5-208ENST00000429846 DIXDC1Q155Q3 683 aa18.5■□□□□ 0.55
MSH5-208ENST00000429846 ARMC5Q96C12 935 aa18.5■□□□□ 0.55
MSH5-208ENST00000429846 MEIS3Q99687 375 aa18.5■□□□□ 0.55
MSH5-208ENST00000429846 HTTP42858 3142 aa18.49■□□□□ 0.55
MSH5-208ENST00000429846 TLR2O60603 784 aa18.49■□□□□ 0.55
MSH5-208ENST00000429846 PHKA1P46020 1223 aa18.49■□□□□ 0.55
MSH5-208ENST00000429846 CDC42EP5Q6NZY7 148 aa18.49■□□□□ 0.55
MSH5-208ENST00000429846 ZNF112Q9UJU3 913 aa18.49■□□□□ 0.55
MSH5-208ENST00000429846 PA2G4Q9UQ80 394 aaKnown RBP18.49■□□□□ 0.55
MSH5-208ENST00000429846 KIAA0100Q14667 2235 aaKnown RBP18.48■□□□□ 0.55
MSH5-208ENST00000429846 MTX1Q13505 466 aa18.48■□□□□ 0.55
MSH5-208ENST00000429846 CCDC102BQ68D86 513 aa18.48■□□□□ 0.55
MSH5-208ENST00000429846 AKAP2Q9Y2D5 859 aa18.48■□□□□ 0.55
MSH5-208ENST00000429846 BTBD19C9JJ37 291 aa18.47■□□□□ 0.55
MSH5-208ENST00000429846 TCP10Q12799 353 aa18.47■□□□□ 0.55
MSH5-208ENST00000429846 NFIAQ12857 509 aa18.47■□□□□ 0.55
MSH5-208ENST00000429846 NOL9Q5SY16 702 aaKnown RBP18.47■□□□□ 0.55
MSH5-208ENST00000429846 MIGA2Q7L4E1 593 aa18.47■□□□□ 0.55
MSH5-208ENST00000429846 SLF2Q8IX21 1173 aa18.47■□□□□ 0.55
MSH5-208ENST00000429846 GAKO14976 1311 aa18.47■□□□□ 0.55
MSH5-208ENST00000429846 IPO8O15397 1037 aaKnown RBP18.46■□□□□ 0.55
MSH5-208ENST00000429846 SRGAP3O43295 1099 aa18.46■□□□□ 0.55
MSH5-208ENST00000429846 GNRH1P01148 92 aa18.46■□□□□ 0.55
MSH5-208ENST00000429846 INPP5BP32019 993 aa18.46■□□□□ 0.55
MSH5-208ENST00000429846 CAP1Q01518 475 aa18.46■□□□□ 0.55
MSH5-208ENST00000429846 RASGRF1Q13972 1273 aa18.46■□□□□ 0.55
MSH5-208ENST00000429846 KIF22Q14807 665 aa18.46■□□□□ 0.55
MSH5-208ENST00000429846 IDI2Q9BXS1 227 aa18.46■□□□□ 0.55
MSH5-208ENST00000429846 USP40Q9NVE5 1235 aa18.46■□□□□ 0.55
MSH5-208ENST00000429846 FAM198AQ9UFP1 575 aa18.46■□□□□ 0.55
MSH5-208ENST00000429846 KCNH4Q9UQ05 1017 aa18.46■□□□□ 0.55
MSH5-208ENST00000429846 RFX7Q2KHR2 1363 aa18.45■□□□□ 0.54
MSH5-208ENST00000429846 ENTPD3O75355 529 aa18.45■□□□□ 0.54
MSH5-208ENST00000429846 ADORA1P30542 326 aa18.45■□□□□ 0.54
MSH5-208ENST00000429846 MVPQ14764 893 aaKnown RBP18.45■□□□□ 0.54
MSH5-208ENST00000429846 SPTY2D1Q68D10 685 aaPredicted RBP18.45■□□□□ 0.54
MSH5-208ENST00000429846 ANKRD23Q86SG2 305 aa18.45■□□□□ 0.54
MSH5-208ENST00000429846 NBPF11Q86T75 865 aa18.45■□□□□ 0.54
MSH5-208ENST00000429846 DZIP1Q86YF9 867 aaKnown RBP18.45■□□□□ 0.54
MSH5-208ENST00000429846 ATRNL1Q5VV63 1379 aa18.44■□□□□ 0.54
MSH5-208ENST00000429846 A0A1B0GUL7 405 aa18.44■□□□□ 0.54
MSH5-208ENST00000429846 POTEFA5A3E0 1075 aa18.44■□□□□ 0.54
MSH5-208ENST00000429846 LACTBP83111 547 aaPredicted RBP18.44■□□□□ 0.54
MSH5-208ENST00000429846 SLC9C1Q4G0N8 1177 aa18.44■□□□□ 0.54
MSH5-208ENST00000429846 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.44■□□□□ 0.54
MSH5-208ENST00000429846 FAM163AQ96GL9 167 aaPredicted RBP18.44■□□□□ 0.54
MSH5-208ENST00000429846 ZNF333Q96JL9 665 aa18.44■□□□□ 0.54
MSH5-208ENST00000429846 ZSWIM8A7E2V4 1837 aa18.44■□□□□ 0.54
MSH5-208ENST00000429846 PRMT2P55345 433 aa18.43■□□□□ 0.54
MSH5-208ENST00000429846 TIMM10P62072 90 aa18.43■□□□□ 0.54
MSH5-208ENST00000429846 ABCF2Q9UG63 623 aa18.43■□□□□ 0.54
MSH5-208ENST00000429846 PTCH2Q9Y6C5 1203 aa18.43■□□□□ 0.54
MSH5-208ENST00000429846 DOCK1Q14185 1865 aa18.43■□□□□ 0.54
MSH5-208ENST00000429846 TRIM27P14373 513 aa18.42■□□□□ 0.54
MSH5-208ENST00000429846 RGS3P49796 1198 aa18.42■□□□□ 0.54
MSH5-208ENST00000429846 TFCP2Q12800 502 aa18.42■□□□□ 0.54
MSH5-208ENST00000429846 ATF7IPQ6VMQ6 1270 aa18.42■□□□□ 0.54
MSH5-208ENST00000429846 XAGE2Q96GT9 111 aa18.42■□□□□ 0.54
MSH5-208ENST00000429846 TMEM106CQ9BVX2 250 aa18.42■□□□□ 0.54
MSH5-208ENST00000429846 CXCL11O14625 94 aa18.41■□□□□ 0.54
MSH5-208ENST00000429846 GNAI2P04899 355 aa18.41■□□□□ 0.54
MSH5-208ENST00000429846 C17orf99Q6UX52 265 aa18.41■□□□□ 0.54
MSH5-208ENST00000429846 MROH7-TTC4A0A0A0MT08 1334 aa18.41■□□□□ 0.54
MSH5-208ENST00000429846 PTPRFP10586 1907 aa18.41■□□□□ 0.54
MSH5-208ENST00000429846 PDHXO00330 501 aa18.4■□□□□ 0.54
MSH5-208ENST00000429846 BTDP43251 543 aa18.4■□□□□ 0.54
MSH5-208ENST00000429846 ERICH6Q7L0X2 663 aa18.4■□□□□ 0.54
MSH5-208ENST00000429846 SCYL3Q8IZE3 742 aa18.4■□□□□ 0.54
MSH5-208ENST00000429846 GCC1Q96CN9 775 aa18.4■□□□□ 0.54
MSH5-208ENST00000429846 PARK7Q99497 189 aaKnown RBP18.4■□□□□ 0.54
MSH5-208ENST00000429846 ADGRA2Q96PE1 1338 aa18.4■□□□□ 0.54
MSH5-208ENST00000429846 PHF20L1A8MW92 1017 aa18.39■□□□□ 0.53
MSH5-208ENST00000429846 MAP4K4O95819 1239 aaPredicted RBP18.39■□□□□ 0.53
MSH5-208ENST00000429846 MAP3K10Q02779 954 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms