RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 DLG5Q8TDM6 1919 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 ITSN1Q15811 1721 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 CDK12Q9NYV4 1490 aaPredicted RBP10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 ROBO2Q9HCK4 1378 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 TOPAZ1Q8N9V7 1692 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 LRRIQ3A6PVS8 624 aaPredicted RBP10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 LIN7AO14910 233 aaPredicted RBP10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 NR1I2O75469 434 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 FCHSD2O94868 740 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 IFFO1Q0D2I5 559 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 WDR93Q6P2C0 686 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 TMC6Q7Z403 805 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 TBC1D5Q92609 795 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 LARP6Q9BRS8 491 aaKnown RBP10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 CORO1CQ9ULV4 474 aaPredicted RBP10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 PHF8Q9UPP1 1060 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 CHMP3Q9Y3E7 222 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 EMILIN1Q9Y6C2 1016 aa10.09□□□□□ -0.79
CDC42BPA-206ENST00000429440 FRMD3A2A2Y4 597 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 ENO4A6NNW6 628 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 WDHD1O75717 1129 aaPredicted RBP10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 ALDH1B1P30837 517 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 ROR2Q01974 943 aaKnown RBP10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 G3BP1Q13283 466 aaKnown RBP eCLIP10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 SKIDA1Q1XH10 827 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 ARMC3Q5W041 872 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 MIS18BP1Q6P0N0 1132 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 CEP57L1Q8IYX8 460 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 B4GALNT2Q8NHY0 566 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 FAM81AQ8TBF8 368 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 OTUD7AQ8TE49 926 aaPredicted RBP10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 PHACTR3Q96KR7 559 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 WDR24Q96S15 920 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 CAPS2Q9BXY5 557 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 SLC40A1Q9NP59 571 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 ARHGAP6O43182 974 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 ZEB2O60315 1214 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 PPFIA3O75145 1194 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 NBPF7P0C2Y1 421 aaPredicted RBP10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 PYGBP11216 843 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 GJB2P29033 226 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 HSPA4P34932 840 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 GCLCP48506 637 aaPredicted RBP10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 DHX58Q96C10 678 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 NUDT16Q96DE0 195 aaKnown RBP10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 SPATA32Q96LK8 384 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 RANBP17Q9H2T7 1088 aaKnown RBP10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 SUGCTQ9HAC7 445 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 PCDHGC5Q9Y5F6 944 aa10.08□□□□□ -0.8
CDC42BPA-206ENST00000429440 FERP16591 822 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 ATP5JP18859 108 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 PRKAR2BP31323 418 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 IL13P35225 146 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 RPAP2Q8IXW5 612 aaPredicted RBP10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 CCDC170Q8IYT3 715 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 NBPF15Q8N660 670 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 ANKRD44Q8N8A2 993 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 ZFAND2BQ8WV99 257 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 LEO1Q8WVC0 666 aaPredicted RBP10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 ALS2CR12Q96Q35 445 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 BPIFA3Q9BQP9 254 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 PPP2R2CQ9Y2T4 447 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 GRIN2DO15399 1336 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 MAP3K5Q99683 1374 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 GOLGA6L7A0A1B0GV03 622 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 GIGYF1O75420 1035 aaPredicted RBP10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 SMNDC1O75940 238 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 VSNL1P62760 191 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 HSP90AB2PQ58FF8 381 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 CCDC178Q5BJE1 867 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 THEMIS2Q5TEJ8 643 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 FAM228AQ86W67 206 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 MYLK4Q86YV6 388 aaPredicted RBP10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 TRIM58Q8NG06 486 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 CCDC47Q96A33 483 aaKnown RBP10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 ZSCAN31Q96LW9 406 aaPredicted RBP10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 SH3GL2Q99962 352 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 LZTS2Q9BRK4 669 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 TSGA10Q9BZW7 698 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 XPO4Q9C0E2 1151 aaKnown RBP10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 IQCGQ9H095 443 aaKnown RBP10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 ACTR5Q9H9F9 607 aaPredicted RBP10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 ANO2Q9NQ90 1003 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 SH2B1Q9NRF2 756 aaPredicted RBP10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 CDC23Q9UJX2 597 aa10.07□□□□□ -0.8
CDC42BPA-206ENST00000429440 SPDYE3A6NKU9 549 aa10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 OPA1O60313 960 aa10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 PDCP20941 246 aa10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 MCM3P25205 808 aa10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 AMPHP49418 695 aa10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 PAPOLAP51003 745 aaKnown RBP10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 RASA3Q14644 834 aa10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 TAX1BP1Q86VP1 789 aa10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 CCDC13Q8IYE1 715 aa10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 EPAS1Q99814 870 aa10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 SLC39A2Q9NP94 309 aa10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 CCDC61Q9Y6R9 512 aa10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 ZC3H4Q9UPT8 1303 aaKnown RBP10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 PDLIM1O00151 329 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms