RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 PTCH2Q9Y6C5 1203 aa16.38■□□□□ 0.21
HLA-F-219ENST00000429294 RPAP1Q9BWH6 1393 aaPredicted RBP16.38■□□□□ 0.21
HLA-F-219ENST00000429294 BTBD19C9JJ37 291 aa16.37■□□□□ 0.21
HLA-F-219ENST00000429294 FGFR2P21802 821 aa16.37■□□□□ 0.21
HLA-F-219ENST00000429294 PRMT2P55345 433 aa16.37■□□□□ 0.21
HLA-F-219ENST00000429294 PPATQ06203 517 aa16.37■□□□□ 0.21
HLA-F-219ENST00000429294 MIGA2Q7L4E1 593 aa16.37■□□□□ 0.21
HLA-F-219ENST00000429294 FAM151AQ8WW52 585 aa16.37■□□□□ 0.21
HLA-F-219ENST00000429294 SSH1Q8WYL5 1049 aa16.37■□□□□ 0.21
HLA-F-219ENST00000429294 HDAC5Q9UQL6 1122 aa16.37■□□□□ 0.21
HLA-F-219ENST00000429294 ZNF521Q96K83 1311 aa16.37■□□□□ 0.21
HLA-F-219ENST00000429294 LACTBP83111 547 aaPredicted RBP16.36■□□□□ 0.21
HLA-F-219ENST00000429294 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
HLA-F-219ENST00000429294 RBBP6Q7Z6E9 1792 aaKnown RBP16.36■□□□□ 0.21
HLA-F-219ENST00000429294 HOXD10P28358 340 aa16.35■□□□□ 0.21
HLA-F-219ENST00000429294 CAP1Q01518 475 aa16.35■□□□□ 0.21
HLA-F-219ENST00000429294 HABP4Q5JVS0 413 aaKnown RBP16.35■□□□□ 0.21
HLA-F-219ENST00000429294 CEP126Q9P2H0 1117 aa16.35■□□□□ 0.21
HLA-F-219ENST00000429294 AK9Q5TCS8 1911 aa16.35■□□□□ 0.21
HLA-F-219ENST00000429294 MYCP01106 439 aaPredicted RBP16.34■□□□□ 0.21
HLA-F-219ENST00000429294 LDHBP07195 334 aaKnown RBP16.34■□□□□ 0.21
HLA-F-219ENST00000429294 UBTFL1P0CB47 393 aaPredicted RBP16.34■□□□□ 0.21
HLA-F-219ENST00000429294 TCP10Q12799 353 aa16.34■□□□□ 0.21
HLA-F-219ENST00000429294 ALDH1L2Q3SY69 923 aa16.34■□□□□ 0.21
HLA-F-219ENST00000429294 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.34■□□□□ 0.21
HLA-F-219ENST00000429294 SMC4Q9NTJ3 1288 aa16.34■□□□□ 0.21
HLA-F-219ENST00000429294 INPP5BP32019 993 aa16.33■□□□□ 0.2
HLA-F-219ENST00000429294 RFX5P48382 616 aaPredicted RBP16.33■□□□□ 0.2
HLA-F-219ENST00000429294 ATP2B3Q16720 1220 aa16.33■□□□□ 0.2
HLA-F-219ENST00000429294 CDC42EP5Q6NZY7 148 aa16.33■□□□□ 0.2
HLA-F-219ENST00000429294 ANKRD23Q86SG2 305 aa16.33■□□□□ 0.2
HLA-F-219ENST00000429294 SIL1Q9H173 461 aa16.33■□□□□ 0.2
HLA-F-219ENST00000429294 DENND2AQ9ULE3 1009 aa16.33■□□□□ 0.2
HLA-F-219ENST00000429294 DAGLAQ9Y4D2 1042 aa16.33■□□□□ 0.2
HLA-F-219ENST00000429294 BRCA2P51587 3418 aa16.32■□□□□ 0.2
HLA-F-219ENST00000429294 PDHXO00330 501 aa16.32■□□□□ 0.2
HLA-F-219ENST00000429294 SEMA3EO15041 775 aa16.32■□□□□ 0.2
HLA-F-219ENST00000429294 CIAO1O76071 339 aa16.32■□□□□ 0.2
HLA-F-219ENST00000429294 DIXDC1Q155Q3 683 aa16.32■□□□□ 0.2
HLA-F-219ENST00000429294 C17orf99Q6UX52 265 aa16.32■□□□□ 0.2
HLA-F-219ENST00000429294 ATG9AQ7Z3C6 839 aa16.32■□□□□ 0.2
HLA-F-219ENST00000429294 ZGPATQ8N5A5 531 aaKnown RBP16.32■□□□□ 0.2
HLA-F-219ENST00000429294 SH3TC2Q8TF17 1288 aa16.32■□□□□ 0.2
HLA-F-219ENST00000429294 ARHGAP39Q9C0H5 1083 aa16.32■□□□□ 0.2
HLA-F-219ENST00000429294 USP40Q9NVE5 1235 aa16.32■□□□□ 0.2
HLA-F-219ENST00000429294 MYH13Q9UKX3 1938 aa16.32■□□□□ 0.2
HLA-F-219ENST00000429294 FMNL1O95466 1100 aaPredicted RBP16.31■□□□□ 0.2
HLA-F-219ENST00000429294 IL15P40933 162 aaPredicted RBP16.31■□□□□ 0.2
HLA-F-219ENST00000429294 PSMC4P43686 418 aa16.31■□□□□ 0.2
HLA-F-219ENST00000429294 SLFN5Q08AF3 891 aa16.31■□□□□ 0.2
HLA-F-219ENST00000429294 RAET1EQ8TD07 263 aa16.31■□□□□ 0.2
HLA-F-219ENST00000429294 PARK7Q99497 189 aaKnown RBP16.31■□□□□ 0.2
HLA-F-219ENST00000429294 CPA4Q9UI42 421 aa16.31■□□□□ 0.2
HLA-F-219ENST00000429294 ZNF112Q9UJU3 913 aa16.31■□□□□ 0.2
HLA-F-219ENST00000429294 KCNH4Q9UQ05 1017 aa16.31■□□□□ 0.2
HLA-F-219ENST00000429294 CXCL11O14625 94 aa16.3■□□□□ 0.2
HLA-F-219ENST00000429294 ECM2O94769 699 aaPredicted RBP16.3■□□□□ 0.2
HLA-F-219ENST00000429294 PRDX5P30044 214 aa16.3■□□□□ 0.2
HLA-F-219ENST00000429294 NFIAQ12857 509 aa16.3■□□□□ 0.2
HLA-F-219ENST00000429294 SLF2Q8IX21 1173 aa16.3■□□□□ 0.2
HLA-F-219ENST00000429294 SRRDQ9UH36 339 aa16.3■□□□□ 0.2
HLA-F-219ENST00000429294 SALL1Q9NSC2 1324 aa16.29■□□□□ 0.2
HLA-F-219ENST00000429294 NOL9Q5SY16 702 aaKnown RBP16.29■□□□□ 0.2
HLA-F-219ENST00000429294 ZSCAN29Q8IWY8 852 aaPredicted RBP16.29■□□□□ 0.2
HLA-F-219ENST00000429294 NKX2-3Q8TAU0 364 aa16.29■□□□□ 0.2
HLA-F-219ENST00000429294 API5Q9BZZ5 524 aaKnown RBP16.29■□□□□ 0.2
HLA-F-219ENST00000429294 PICK1Q9NRD5 415 aa16.29■□□□□ 0.2
HLA-F-219ENST00000429294 TRIOBPQ9H2D6 2365 aa16.28■□□□□ 0.2
HLA-F-219ENST00000429294 CT47B1P0C2W7 299 aaPredicted RBP16.28■□□□□ 0.2
HLA-F-219ENST00000429294 FASTKD5Q7L8L6 764 aaKnown RBP16.28■□□□□ 0.2
HLA-F-219ENST00000429294 DZIP1Q86YF9 867 aaKnown RBP16.28■□□□□ 0.2
HLA-F-219ENST00000429294 TRIM47Q96LD4 638 aa16.28■□□□□ 0.2
HLA-F-219ENST00000429294 BIN2Q9UBW5 565 aaPredicted RBP16.28■□□□□ 0.2
HLA-F-219ENST00000429294 FAM198AQ9UFP1 575 aa16.28■□□□□ 0.2
HLA-F-219ENST00000429294 MYPNQ86TC9 1320 aa16.27■□□□□ 0.2
HLA-F-219ENST00000429294 ENTPD3O75355 529 aa16.27■□□□□ 0.2
HLA-F-219ENST00000429294 GRK4P32298 578 aa16.27■□□□□ 0.2
HLA-F-219ENST00000429294 PHKA1P46020 1223 aa16.27■□□□□ 0.2
HLA-F-219ENST00000429294 FCGRTP55899 365 aa16.27■□□□□ 0.2
HLA-F-219ENST00000429294 SPTY2D1Q68D10 685 aaPredicted RBP16.27■□□□□ 0.2
HLA-F-219ENST00000429294 LRRFIP2Q9Y608 721 aaKnown RBP16.27■□□□□ 0.2
HLA-F-219ENST00000429294 ZHX2Q9Y6X8 837 aa16.27■□□□□ 0.2
HLA-F-219ENST00000429294 OSBPP22059 807 aa16.26■□□□□ 0.19
HLA-F-219ENST00000429294 RGS3P49796 1198 aa16.26■□□□□ 0.19
HLA-F-219ENST00000429294 UBXN2AP68543 259 aa16.26■□□□□ 0.19
HLA-F-219ENST00000429294 CCDC102BQ68D86 513 aa16.26■□□□□ 0.19
HLA-F-219ENST00000429294 SCYL3Q8IZE3 742 aa16.26■□□□□ 0.19
HLA-F-219ENST00000429294 IDI2Q9BXS1 227 aa16.26■□□□□ 0.19
HLA-F-219ENST00000429294 COPRSQ9NQ92 184 aa16.26■□□□□ 0.19
HLA-F-219ENST00000429294 ABCF2Q9UG63 623 aa16.26■□□□□ 0.19
HLA-F-219ENST00000429294 NOB1Q9ULX3 412 aaKnown RBP16.26■□□□□ 0.19
HLA-F-219ENST00000429294 AKAP2Q9Y2D5 859 aa16.26■□□□□ 0.19
HLA-F-219ENST00000429294 DPF3Q92784 378 aa16.25■□□□□ 0.19
HLA-F-219ENST00000429294 ADGRA2Q96PE1 1338 aa16.24■□□□□ 0.19
HLA-F-219ENST00000429294 ZBTB22O15209 634 aa16.24■□□□□ 0.19
HLA-F-219ENST00000429294 CYP2C8P10632 490 aa16.24■□□□□ 0.19
HLA-F-219ENST00000429294 MTFR1Q15390 333 aa16.24■□□□□ 0.19
HLA-F-219ENST00000429294 ZFPM1Q8IX07 1006 aa16.24■□□□□ 0.19
HLA-F-219ENST00000429294 CDCA7LQ96GN5 454 aa16.24■□□□□ 0.19
HLA-F-219ENST00000429294 RNF208Q9H0X6 261 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms