RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 AOX1Q06278 1338 aa15.29■□□□□ 0.04
HLA-DQB3-203ENST00000425319 EYA2O00167 538 aa15.29■□□□□ 0.04
HLA-DQB3-203ENST00000425319 PDHXO00330 501 aa15.29■□□□□ 0.04
HLA-DQB3-203ENST00000425319 APOBEC3HQ6NTF7 200 aaKnown RBP15.29■□□□□ 0.04
HLA-DQB3-203ENST00000425319 PICK1Q9NRD5 415 aa15.29■□□□□ 0.04
HLA-DQB3-203ENST00000425319 SNCAIPQ9Y6H5 919 aa15.29■□□□□ 0.04
HLA-DQB3-203ENST00000425319 E9PSI1 815 aa15.28■□□□□ 0.04
HLA-DQB3-203ENST00000425319 CXCL11O14625 94 aa15.28■□□□□ 0.04
HLA-DQB3-203ENST00000425319 FCGRTP55899 365 aa15.28■□□□□ 0.04
HLA-DQB3-203ENST00000425319 TCP10Q12799 353 aa15.28■□□□□ 0.04
HLA-DQB3-203ENST00000425319 ZSCAN29Q8IWY8 852 aaPredicted RBP15.28■□□□□ 0.04
HLA-DQB3-203ENST00000425319 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.28■□□□□ 0.04
HLA-DQB3-203ENST00000425319 SH3TC2Q8TF17 1288 aa15.28■□□□□ 0.04
HLA-DQB3-203ENST00000425319 PARK7Q99497 189 aaKnown RBP15.28■□□□□ 0.04
HLA-DQB3-203ENST00000425319 USP40Q9NVE5 1235 aa15.28■□□□□ 0.04
HLA-DQB3-203ENST00000425319 DENND2AQ9ULE3 1009 aa15.28■□□□□ 0.04
HLA-DQB3-203ENST00000425319 NR2E3Q9Y5X4 410 aa15.28■□□□□ 0.04
HLA-DQB3-203ENST00000425319 SEMA3EO15041 775 aa15.27■□□□□ 0.04
HLA-DQB3-203ENST00000425319 GRK4P32298 578 aa15.27■□□□□ 0.04
HLA-DQB3-203ENST00000425319 SPTY2D1Q68D10 685 aaPredicted RBP15.27■□□□□ 0.04
HLA-DQB3-203ENST00000425319 C17orf99Q6UX52 265 aa15.27■□□□□ 0.04
HLA-DQB3-203ENST00000425319 MRPL50Q8N5N7 158 aaKnown RBP15.27■□□□□ 0.04
HLA-DQB3-203ENST00000425319 KAZALD1Q96I82 304 aa15.27■□□□□ 0.04
HLA-DQB3-203ENST00000425319 SPINK5Q9NQ38 1064 aaPredicted RBP15.27■□□□□ 0.04
HLA-DQB3-203ENST00000425319 SRRDQ9UH36 339 aa15.27■□□□□ 0.04
HLA-DQB3-203ENST00000425319 CPA4Q9UI42 421 aa15.27■□□□□ 0.04
HLA-DQB3-203ENST00000425319 LRRFIP2Q9Y608 721 aaKnown RBP15.27■□□□□ 0.04
HLA-DQB3-203ENST00000425319 CACNA1FO60840 1977 aa15.26■□□□□ 0.03
HLA-DQB3-203ENST00000425319 UBTFL1P0CB47 393 aaPredicted RBP15.26■□□□□ 0.03
HLA-DQB3-203ENST00000425319 CDAN1Q8IWY9 1227 aa15.26■□□□□ 0.03
HLA-DQB3-203ENST00000425319 ANKRD44Q8N8A2 993 aa15.26■□□□□ 0.03
HLA-DQB3-203ENST00000425319 RPAP1Q9BWH6 1393 aaPredicted RBP15.25■□□□□ 0.03
HLA-DQB3-203ENST00000425319 ZNF316A6NFI3 1004 aaPredicted RBP15.25■□□□□ 0.03
HLA-DQB3-203ENST00000425319 ECM2O94769 699 aaPredicted RBP15.25■□□□□ 0.03
HLA-DQB3-203ENST00000425319 FGFR2P21802 821 aa15.25■□□□□ 0.03
HLA-DQB3-203ENST00000425319 GRIK5Q16478 980 aa15.25■□□□□ 0.03
HLA-DQB3-203ENST00000425319 ATP2B3Q16720 1220 aa15.25■□□□□ 0.03
HLA-DQB3-203ENST00000425319 ALDH1L2Q3SY69 923 aa15.25■□□□□ 0.03
HLA-DQB3-203ENST00000425319 CDC42EP5Q6NZY7 148 aa15.25■□□□□ 0.03
HLA-DQB3-203ENST00000425319 VGLL2Q8N8G2 317 aa15.25■□□□□ 0.03
HLA-DQB3-203ENST00000425319 USP44Q9H0E7 712 aa15.25■□□□□ 0.03
HLA-DQB3-203ENST00000425319 RNF208Q9H0X6 261 aa15.25■□□□□ 0.03
HLA-DQB3-203ENST00000425319 ZNF112Q9UJU3 913 aa15.25■□□□□ 0.03
HLA-DQB3-203ENST00000425319 KCNH4Q9UQ05 1017 aa15.25■□□□□ 0.03
HLA-DQB3-203ENST00000425319 MYPNQ86TC9 1320 aa15.24■□□□□ 0.03
HLA-DQB3-203ENST00000425319 ENTPD3O75355 529 aa15.24■□□□□ 0.03
HLA-DQB3-203ENST00000425319 INPP5BP32019 993 aa15.24■□□□□ 0.03
HLA-DQB3-203ENST00000425319 DZIP1Q86YF9 867 aaKnown RBP15.24■□□□□ 0.03
HLA-DQB3-203ENST00000425319 SLAIN1Q8ND83 568 aa15.24■□□□□ 0.03
HLA-DQB3-203ENST00000425319 KLHDC4Q8TBB5 520 aa15.24■□□□□ 0.03
HLA-DQB3-203ENST00000425319 COLQQ9Y215 455 aaPredicted RBP15.24■□□□□ 0.03
HLA-DQB3-203ENST00000425319 AKAP2Q9Y2D5 859 aa15.24■□□□□ 0.03
HLA-DQB3-203ENST00000425319 CIAO1O76071 339 aa15.23■□□□□ 0.03
HLA-DQB3-203ENST00000425319 GJB1P08034 283 aa15.23■□□□□ 0.03
HLA-DQB3-203ENST00000425319 OSBPP22059 807 aa15.23■□□□□ 0.03
HLA-DQB3-203ENST00000425319 IL15P40933 162 aaPredicted RBP15.23■□□□□ 0.03
HLA-DQB3-203ENST00000425319 NOL9Q5SY16 702 aaKnown RBP15.23■□□□□ 0.03
HLA-DQB3-203ENST00000425319 SMCR8Q8TEV9 937 aaPredicted RBP15.23■□□□□ 0.03
HLA-DQB3-203ENST00000425319 ARHGAP39Q9C0H5 1083 aa15.23■□□□□ 0.03
HLA-DQB3-203ENST00000425319 DAGLAQ9Y4D2 1042 aa15.23■□□□□ 0.03
HLA-DQB3-203ENST00000425319 ZHX2Q9Y6X8 837 aa15.23■□□□□ 0.03
HLA-DQB3-203ENST00000425319 H0YGN5 161 aa15.22■□□□□ 0.03
HLA-DQB3-203ENST00000425319 LDHCP07864 332 aa15.22■□□□□ 0.03
HLA-DQB3-203ENST00000425319 GJA8P48165 433 aa15.22■□□□□ 0.03
HLA-DQB3-203ENST00000425319 GADL1Q6ZQY3 521 aa15.22■□□□□ 0.03
HLA-DQB3-203ENST00000425319 SCYL3Q8IZE3 742 aa15.22■□□□□ 0.03
HLA-DQB3-203ENST00000425319 COA7Q96BR5 231 aa15.22■□□□□ 0.03
HLA-DQB3-203ENST00000425319 SIL1Q9H173 461 aa15.22■□□□□ 0.03
HLA-DQB3-203ENST00000425319 SMC4Q9NTJ3 1288 aa15.22■□□□□ 0.03
HLA-DQB3-203ENST00000425319 ABCF2Q9UG63 623 aa15.22■□□□□ 0.03
HLA-DQB3-203ENST00000425319 ECM29Q5VYK3 1845 aa15.22■□□□□ 0.03
HLA-DQB3-203ENST00000425319 SALL1Q9NSC2 1324 aa15.21■□□□□ 0.03
HLA-DQB3-203ENST00000425319 CCL5P13501 91 aa15.21■□□□□ 0.03
HLA-DQB3-203ENST00000425319 PABPC4Q13310 644 aaKnown RBP eCLIP15.21■□□□□ 0.03
HLA-DQB3-203ENST00000425319 GORABQ5T7V8 394 aa15.21■□□□□ 0.03
HLA-DQB3-203ENST00000425319 SSH1Q8WYL5 1049 aa15.21■□□□□ 0.03
HLA-DQB3-203ENST00000425319 NOL10Q9BSC4 688 aaKnown RBP15.21■□□□□ 0.03
HLA-DQB3-203ENST00000425319 API5Q9BZZ5 524 aaKnown RBP15.21■□□□□ 0.03
HLA-DQB3-203ENST00000425319 PNMA3Q9UL41 463 aa15.21■□□□□ 0.03
HLA-DQB3-203ENST00000425319 SLC45A1Q9Y2W3 748 aa15.21■□□□□ 0.03
HLA-DQB3-203ENST00000425319 ZNF646O15015 1829 aaPredicted RBP15.2■□□□□ 0.02
HLA-DQB3-203ENST00000425319 TNRC18O15417 2968 aaPredicted RBP15.2■□□□□ 0.02
HLA-DQB3-203ENST00000425319 CTNND1O60716 968 aaKnown RBP15.2■□□□□ 0.02
HLA-DQB3-203ENST00000425319 TFRCP02786 760 aaKnown RBP15.2■□□□□ 0.02
HLA-DQB3-203ENST00000425319 PRDX5P30044 214 aa15.2■□□□□ 0.02
HLA-DQB3-203ENST00000425319 FXR1P51114 621 aaKnown RBP eCLIP15.2■□□□□ 0.02
HLA-DQB3-203ENST00000425319 GSTO1P78417 241 aa15.2■□□□□ 0.02
HLA-DQB3-203ENST00000425319 DIXDC1Q155Q3 683 aa15.2■□□□□ 0.02
HLA-DQB3-203ENST00000425319 IDI2Q9BXS1 227 aa15.2■□□□□ 0.02
HLA-DQB3-203ENST00000425319 TNPO2O14787 897 aaKnown RBP15.19■□□□□ 0.02
HLA-DQB3-203ENST00000425319 ADCY3O60266 1144 aa15.19■□□□□ 0.02
HLA-DQB3-203ENST00000425319 MAP4K4O95819 1239 aaPredicted RBP15.19■□□□□ 0.02
HLA-DQB3-203ENST00000425319 CT47B1P0C2W7 299 aaPredicted RBP15.19■□□□□ 0.02
HLA-DQB3-203ENST00000425319 MTFR1Q15390 333 aa15.19■□□□□ 0.02
HLA-DQB3-203ENST00000425319 ERICH6Q7L0X2 663 aa15.19■□□□□ 0.02
HLA-DQB3-203ENST00000425319 TBC1D2Q9BYX2 928 aa15.19■□□□□ 0.02
HLA-DQB3-203ENST00000425319 EVI5O60447 810 aa15.18■□□□□ 0.02
HLA-DQB3-203ENST00000425319 SGPL1O95470 568 aa15.18■□□□□ 0.02
HLA-DQB3-203ENST00000425319 RFX5P48382 616 aaPredicted RBP15.18■□□□□ 0.02
HLA-DQB3-203ENST00000425319 RGS3P49796 1198 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms