RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 CRKP46108 304 aa10.59□□□□□ -0.71
HERPUD2-203ENST00000413517 ATP8B2P98198 1209 aa10.59□□□□□ -0.71
HERPUD2-203ENST00000413517 C20orf194Q5TEA3 1177 aa10.59□□□□□ -0.71
HERPUD2-203ENST00000413517 CDAN1Q8IWY9 1227 aa10.59□□□□□ -0.71
HERPUD2-203ENST00000413517 TDRD3Q9H7E2 651 aaKnown RBP10.59□□□□□ -0.71
HERPUD2-203ENST00000413517 FRAT2O75474 233 aaPredicted RBP10.58□□□□□ -0.72
HERPUD2-203ENST00000413517 PRDX5P30044 214 aa10.58□□□□□ -0.72
HERPUD2-203ENST00000413517 RASGRF1Q13972 1273 aa10.58□□□□□ -0.72
HERPUD2-203ENST00000413517 COL13A1Q5TAT6 717 aaPredicted RBP10.58□□□□□ -0.72
HERPUD2-203ENST00000413517 CCDC102BQ68D86 513 aa10.58□□□□□ -0.72
HERPUD2-203ENST00000413517 CEP85Q6P2H3 762 aa10.58□□□□□ -0.72
HERPUD2-203ENST00000413517 APOBEC3FQ8IUX4 373 aaKnown RBP10.58□□□□□ -0.72
HERPUD2-203ENST00000413517 C2orf69Q8N8R5 385 aa10.58□□□□□ -0.72
HERPUD2-203ENST00000413517 TBC1D22AQ8WUA7 517 aa10.58□□□□□ -0.72
HERPUD2-203ENST00000413517 XAGE2Q96GT9 111 aa10.58□□□□□ -0.72
HERPUD2-203ENST00000413517 DEFB129Q9H1M3 183 aa10.58□□□□□ -0.72
HERPUD2-203ENST00000413517 ZNF70Q9UC06 446 aaPredicted RBP10.58□□□□□ -0.72
HERPUD2-203ENST00000413517 SERPINA10Q9UK55 444 aa10.58□□□□□ -0.72
HERPUD2-203ENST00000413517 COG6Q9Y2V7 657 aa10.58□□□□□ -0.72
HERPUD2-203ENST00000413517 MAST2Q6P0Q8 1798 aa10.57□□□□□ -0.72
HERPUD2-203ENST00000413517 DOCK2Q92608 1830 aa10.57□□□□□ -0.72
HERPUD2-203ENST00000413517 UBE2Q2LH0YL09 131 aa10.57□□□□□ -0.72
HERPUD2-203ENST00000413517 ECE1P42892 770 aa10.57□□□□□ -0.72
HERPUD2-203ENST00000413517 RBM5P52756 815 aaKnown RBP eCLIP10.57□□□□□ -0.72
HERPUD2-203ENST00000413517 CACNB3P54284 484 aa10.57□□□□□ -0.72
HERPUD2-203ENST00000413517 MVPQ14764 893 aaKnown RBP10.57□□□□□ -0.72
HERPUD2-203ENST00000413517 RGMBQ6NW40 437 aa10.57□□□□□ -0.72
HERPUD2-203ENST00000413517 PI16Q6UXB8 463 aa10.57□□□□□ -0.72
HERPUD2-203ENST00000413517 VEZTQ9HBM0 779 aa10.57□□□□□ -0.72
HERPUD2-203ENST00000413517 SLC10A3P09131 477 aa10.56□□□□□ -0.72
HERPUD2-203ENST00000413517 HSPA8P11142 646 aaKnown RBP10.56□□□□□ -0.72
HERPUD2-203ENST00000413517 HDLBPQ00341 1268 aaKnown RBP10.56□□□□□ -0.72
HERPUD2-203ENST00000413517 PRKG1Q13976 671 aa10.56□□□□□ -0.72
HERPUD2-203ENST00000413517 RASA3Q14644 834 aa10.56□□□□□ -0.72
HERPUD2-203ENST00000413517 DIXDC1Q155Q3 683 aa10.56□□□□□ -0.72
HERPUD2-203ENST00000413517 NBPF12Q5TAG4 269 aaPredicted RBP10.56□□□□□ -0.72
HERPUD2-203ENST00000413517 APOBEC3HQ6NTF7 200 aaKnown RBP10.56□□□□□ -0.72
HERPUD2-203ENST00000413517 RASAL3Q86YV0 1011 aa10.56□□□□□ -0.72
HERPUD2-203ENST00000413517 SIRT2Q8IXJ6 389 aa10.56□□□□□ -0.72
HERPUD2-203ENST00000413517 WDR66Q8TBY9 1149 aa10.56□□□□□ -0.72
HERPUD2-203ENST00000413517 ZNF384Q8TF68 577 aa10.56□□□□□ -0.72
HERPUD2-203ENST00000413517 TEPSINQ96N21 525 aa10.56□□□□□ -0.72
HERPUD2-203ENST00000413517 NOP58Q9Y2X3 529 aaKnown RBP10.56□□□□□ -0.72
HERPUD2-203ENST00000413517 DAGLAQ9Y4D2 1042 aa10.56□□□□□ -0.72
HERPUD2-203ENST00000413517 FOCADQ5VW36 1801 aa10.56□□□□□ -0.72
HERPUD2-203ENST00000413517 SALL1Q9NSC2 1324 aa10.56□□□□□ -0.72
HERPUD2-203ENST00000413517 TCP10L2B9ZVM9 353 aa10.55□□□□□ -0.72
HERPUD2-203ENST00000413517 SURF6O75683 361 aaKnown RBP10.55□□□□□ -0.72
HERPUD2-203ENST00000413517 MAP2K2P36507 400 aa10.55□□□□□ -0.72
HERPUD2-203ENST00000413517 ZNF157P51786 506 aaPredicted RBP10.55□□□□□ -0.72
HERPUD2-203ENST00000413517 FKBP1BP68106 108 aa10.55□□□□□ -0.72
HERPUD2-203ENST00000413517 G3BP1Q13283 466 aaKnown RBP eCLIP10.55□□□□□ -0.72
HERPUD2-203ENST00000413517 IFNL1Q8IU54 200 aa10.55□□□□□ -0.72
HERPUD2-203ENST00000413517 TEKT1Q969V4 418 aa10.55□□□□□ -0.72
HERPUD2-203ENST00000413517 ZDHHC15Q96MV8 337 aa10.55□□□□□ -0.72
HERPUD2-203ENST00000413517 NEUROD6Q96NK8 337 aa10.55□□□□□ -0.72
HERPUD2-203ENST00000413517 DBNDD2Q9BQY9 259 aa10.55□□□□□ -0.72
HERPUD2-203ENST00000413517 ZBTB40Q9NUA8 1239 aa10.55□□□□□ -0.72
HERPUD2-203ENST00000413517 TLR7Q9NYK1 1049 aaKnown RBP10.55□□□□□ -0.72
HERPUD2-203ENST00000413517 TSKSQ9UJT2 592 aa10.55□□□□□ -0.72
HERPUD2-203ENST00000413517 AKAP2Q9Y2D5 859 aa10.55□□□□□ -0.72
HERPUD2-203ENST00000413517 SUGT1Q9Y2Z0 365 aa10.55□□□□□ -0.72
HERPUD2-203ENST00000413517 PITPNM1O00562 1244 aa10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 MYO1BO43795 1136 aa10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 ARID4AP29374 1257 aaPredicted RBP10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 MCAMP43121 646 aa10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 LBX1P52954 281 aa10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 KIF23Q02241 960 aaPredicted RBP10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 NOGQ13253 232 aa10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 TNNI3KQ59H18 835 aa10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 LDLRAD1Q5T700 205 aa10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 HHIPL2Q6UWX4 724 aa10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 MS4A4AQ96JQ5 239 aa10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 MRIQ9BWK5 157 aa10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 TMEM39BQ9GZU3 492 aa10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 GNL3LQ9NVN8 582 aaKnown RBP10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 HMG20BQ9P0W2 317 aa10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 DENND2AQ9ULE3 1009 aa10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 EXOC6BQ9Y2D4 811 aa10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 FPGT-TNNI3KV9GXZ4 949 aa10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 PDS5AQ29RF7 1337 aaKnown RBP10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 SIPA1L1O43166 1804 aa10.54□□□□□ -0.72
HERPUD2-203ENST00000413517 RFX7Q2KHR2 1363 aa10.53□□□□□ -0.72
HERPUD2-203ENST00000413517 GPR37O15354 613 aa10.53□□□□□ -0.72
HERPUD2-203ENST00000413517 USP2O75604 605 aaPredicted RBP10.53□□□□□ -0.72
HERPUD2-203ENST00000413517 CTCFP49711 727 aaPredicted RBP10.53□□□□□ -0.72
HERPUD2-203ENST00000413517 MAP2K1Q02750 393 aaPredicted RBP10.53□□□□□ -0.72
HERPUD2-203ENST00000413517 TTLL12Q14166 644 aaPredicted RBP10.53□□□□□ -0.72
HERPUD2-203ENST00000413517 MAP3K11Q16584 847 aa10.53□□□□□ -0.72
HERPUD2-203ENST00000413517 TBC1D9Q6ZT07 1266 aa10.53□□□□□ -0.72
HERPUD2-203ENST00000413517 EAF2Q96CJ1 260 aaPredicted RBP10.53□□□□□ -0.72
HERPUD2-203ENST00000413517 CLMNQ96JQ2 1002 aa10.53□□□□□ -0.72
HERPUD2-203ENST00000413517 YTHDC1Q96MU7 727 aaKnown RBP10.53□□□□□ -0.72
HERPUD2-203ENST00000413517 GPR108Q9NPR9 543 aa10.53□□□□□ -0.72
HERPUD2-203ENST00000413517 DBNLQ9UJU6 430 aaKnown RBP10.53□□□□□ -0.72
HERPUD2-203ENST00000413517 DDX19BQ9UMR2 479 aa10.53□□□□□ -0.72
HERPUD2-203ENST00000413517 ANGEL1Q9UNK9 670 aaKnown RBP10.53□□□□□ -0.72
HERPUD2-203ENST00000413517 PPP2R3BQ9Y5P8 575 aa10.53□□□□□ -0.72
HERPUD2-203ENST00000413517 MAST3O60307 1309 aa10.53□□□□□ -0.72
HERPUD2-203ENST00000413517 MYH7P12883 1935 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms