RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 FRAT1Q92837 279 aaPredicted RBP20.27■□□□□ 0.84
DDR1-229ENST00000396342 TMEM106CQ9BVX2 250 aa20.27■□□□□ 0.84
DDR1-229ENST00000396342 ZCCHC17Q9NP64 241 aaKnown RBP20.27■□□□□ 0.84
DDR1-229ENST00000396342 USP40Q9NVE5 1235 aa20.27■□□□□ 0.84
DDR1-229ENST00000396342 GJA5P36382 358 aa20.26■□□□□ 0.83
DDR1-229ENST00000396342 TCP10Q12799 353 aa20.26■□□□□ 0.83
DDR1-229ENST00000396342 ZSCAN29Q8IWY8 852 aaPredicted RBP20.26■□□□□ 0.83
DDR1-229ENST00000396342 COPRSQ9NQ92 184 aa20.26■□□□□ 0.83
DDR1-229ENST00000396342 ABCF2Q9UG63 623 aa20.26■□□□□ 0.83
DDR1-229ENST00000396342 ZNF646O15015 1829 aaPredicted RBP20.25■□□□□ 0.83
DDR1-229ENST00000396342 RPAP1Q9BWH6 1393 aaPredicted RBP20.25■□□□□ 0.83
DDR1-229ENST00000396342 PPATQ06203 517 aa20.25■□□□□ 0.83
DDR1-229ENST00000396342 PPIL2Q13356 520 aa20.25■□□□□ 0.83
DDR1-229ENST00000396342 MIGA2Q7L4E1 593 aa20.25■□□□□ 0.83
DDR1-229ENST00000396342 BRI3BPQ8WY22 251 aa20.25■□□□□ 0.83
DDR1-229ENST00000396342 PTPN22Q9Y2R2 807 aa20.25■□□□□ 0.83
DDR1-229ENST00000396342 DAGLAQ9Y4D2 1042 aa20.25■□□□□ 0.83
DDR1-229ENST00000396342 SALL1Q9NSC2 1324 aa20.25■□□□□ 0.83
DDR1-229ENST00000396342 G3BP1Q13283 466 aaKnown RBP eCLIP20.24■□□□□ 0.83
DDR1-229ENST00000396342 DIXDC1Q155Q3 683 aa20.24■□□□□ 0.83
DDR1-229ENST00000396342 CCDC102BQ68D86 513 aa20.24■□□□□ 0.83
DDR1-229ENST00000396342 CDAN1Q8IWY9 1227 aa20.24■□□□□ 0.83
DDR1-229ENST00000396342 ZKSCAN4Q969J2 545 aaPredicted RBP20.24■□□□□ 0.83
DDR1-229ENST00000396342 MS4A4AQ96JQ5 239 aa20.24■□□□□ 0.83
DDR1-229ENST00000396342 NEUROD6Q96NK8 337 aa20.24■□□□□ 0.83
DDR1-229ENST00000396342 MEIS3Q99687 375 aa20.24■□□□□ 0.83
DDR1-229ENST00000396342 PTPN18Q99952 460 aa20.24■□□□□ 0.83
DDR1-229ENST00000396342 PICK1Q9NRD5 415 aa20.24■□□□□ 0.83
DDR1-229ENST00000396342 GNAI2P04899 355 aa20.23■□□□□ 0.83
DDR1-229ENST00000396342 PRDX5P30044 214 aa20.23■□□□□ 0.83
DDR1-229ENST00000396342 GSTO1P78417 241 aa20.23■□□□□ 0.83
DDR1-229ENST00000396342 CDC42EP5Q6NZY7 148 aa20.23■□□□□ 0.83
DDR1-229ENST00000396342 PA2G4Q9UQ80 394 aaKnown RBP20.23■□□□□ 0.83
DDR1-229ENST00000396342 GNRH1P01148 92 aa20.22■□□□□ 0.83
DDR1-229ENST00000396342 PHKA1P46020 1223 aa20.22■□□□□ 0.83
DDR1-229ENST00000396342 SLC9C1Q4G0N8 1177 aa20.22■□□□□ 0.83
DDR1-229ENST00000396342 PRPF38BQ5VTL8 546 aaKnown RBP20.22■□□□□ 0.83
DDR1-229ENST00000396342 CNKSR2Q8WXI2 1034 aa20.22■□□□□ 0.83
DDR1-229ENST00000396342 NOL10Q9BSC4 688 aaKnown RBP20.22■□□□□ 0.83
DDR1-229ENST00000396342 SNCAIPQ9Y6H5 919 aa20.22■□□□□ 0.83
DDR1-229ENST00000396342 A0A1B0GUL6 1792 aa20.21■□□□□ 0.83
DDR1-229ENST00000396342 ECM29Q5VYK3 1845 aa20.21■□□□□ 0.83
DDR1-229ENST00000396342 IRF6O14896 467 aa20.21■□□□□ 0.83
DDR1-229ENST00000396342 LDHCP07864 332 aa20.21■□□□□ 0.83
DDR1-229ENST00000396342 HOXD10P28358 340 aa20.21■□□□□ 0.83
DDR1-229ENST00000396342 OS9Q13438 667 aaPredicted RBP20.21■□□□□ 0.83
DDR1-229ENST00000396342 ERICH6Q7L0X2 663 aa20.21■□□□□ 0.83
DDR1-229ENST00000396342 TLR2O60603 784 aa20.2■□□□□ 0.82
DDR1-229ENST00000396342 ENTPD3O75355 529 aa20.2■□□□□ 0.82
DDR1-229ENST00000396342 ATF7IPQ6VMQ6 1270 aa20.2■□□□□ 0.82
DDR1-229ENST00000396342 FAM43AQ8N2R8 423 aa20.2■□□□□ 0.82
DDR1-229ENST00000396342 A0A1B0GUL7 405 aa20.19■□□□□ 0.82
DDR1-229ENST00000396342 PRMT2P55345 433 aa20.19■□□□□ 0.82
DDR1-229ENST00000396342 TIMM10P62072 90 aa20.19■□□□□ 0.82
DDR1-229ENST00000396342 TFCP2Q12800 502 aa20.19■□□□□ 0.82
DDR1-229ENST00000396342 SLC4A8Q2Y0W8 1093 aa20.19■□□□□ 0.82
DDR1-229ENST00000396342 FTSJ3Q8IY81 847 aaKnown RBP20.19■□□□□ 0.82
DDR1-229ENST00000396342 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.19■□□□□ 0.82
DDR1-229ENST00000396342 XAGE2Q96GT9 111 aa20.19■□□□□ 0.82
DDR1-229ENST00000396342 PDS5AQ29RF7 1337 aaKnown RBP20.19■□□□□ 0.82
DDR1-229ENST00000396342 BTBD19C9JJ37 291 aa20.18■□□□□ 0.82
DDR1-229ENST00000396342 ZKSCAN2Q63HK3 967 aa20.18■□□□□ 0.82
DDR1-229ENST00000396342 ANKRD23Q86SG2 305 aa20.18■□□□□ 0.82
DDR1-229ENST00000396342 GCC1Q96CN9 775 aa20.18■□□□□ 0.82
DDR1-229ENST00000396342 ZBTB22O15209 634 aa20.17■□□□□ 0.82
DDR1-229ENST00000396342 MAP4K4O95819 1239 aaPredicted RBP20.17■□□□□ 0.82
DDR1-229ENST00000396342 UQCRFS1P1P0C7P4 283 aa20.17■□□□□ 0.82
DDR1-229ENST00000396342 ADORA1P30542 326 aa20.17■□□□□ 0.82
DDR1-229ENST00000396342 INPP5BP32019 993 aa20.17■□□□□ 0.82
DDR1-229ENST00000396342 RGS3P49796 1198 aa20.17■□□□□ 0.82
DDR1-229ENST00000396342 MTX1Q13505 466 aa20.17■□□□□ 0.82
DDR1-229ENST00000396342 RASGRF1Q13972 1273 aa20.17■□□□□ 0.82
DDR1-229ENST00000396342 FASTKD5Q7L8L6 764 aaKnown RBP20.17■□□□□ 0.82
DDR1-229ENST00000396342 PARK7Q99497 189 aaKnown RBP20.17■□□□□ 0.82
DDR1-229ENST00000396342 PDHXO00330 501 aa20.16■□□□□ 0.82
DDR1-229ENST00000396342 CXCL11O14625 94 aa20.16■□□□□ 0.82
DDR1-229ENST00000396342 NFIAQ12857 509 aa20.16■□□□□ 0.82
DDR1-229ENST00000396342 PICALMQ13492 652 aa20.16■□□□□ 0.82
DDR1-229ENST00000396342 NOL9Q5SY16 702 aaKnown RBP20.16■□□□□ 0.82
DDR1-229ENST00000396342 CLUAP1Q96AJ1 413 aa20.16■□□□□ 0.82
DDR1-229ENST00000396342 ARMC5Q96C12 935 aa20.16■□□□□ 0.82
DDR1-229ENST00000396342 IDI2Q9BXS1 227 aa20.16■□□□□ 0.82
DDR1-229ENST00000396342 RAI14Q9P0K7 980 aa20.16■□□□□ 0.82
DDR1-229ENST00000396342 LRP2BPQ9P2M1 347 aa20.16■□□□□ 0.82
DDR1-229ENST00000396342 ZNF112Q9UJU3 913 aa20.16■□□□□ 0.82
DDR1-229ENST00000396342 ARAP2Q8WZ64 1704 aa20.16■□□□□ 0.82
DDR1-229ENST00000396342 FMNL1O95466 1100 aaPredicted RBP20.15■□□□□ 0.82
DDR1-229ENST00000396342 TRIM27P14373 513 aa20.15■□□□□ 0.82
DDR1-229ENST00000396342 BTDP43251 543 aa20.15■□□□□ 0.82
DDR1-229ENST00000396342 LACTBP83111 547 aaPredicted RBP20.15■□□□□ 0.82
DDR1-229ENST00000396342 CCDC158Q5M9N0 1113 aa20.15■□□□□ 0.82
DDR1-229ENST00000396342 SCYL3Q8IZE3 742 aa20.14■□□□□ 0.81
DDR1-229ENST00000396342 SPATA5Q8NB90 893 aa20.14■□□□□ 0.81
DDR1-229ENST00000396342 FAM163AQ96GL9 167 aaPredicted RBP20.14■□□□□ 0.81
DDR1-229ENST00000396342 FAM198AQ9UFP1 575 aa20.14■□□□□ 0.81
DDR1-229ENST00000396342 ZHX2Q9Y6X8 837 aa20.14■□□□□ 0.81
DDR1-229ENST00000396342 MROH7-TTC4A0A0A0MT08 1334 aa20.13■□□□□ 0.81
DDR1-229ENST00000396342 GAKO14976 1311 aa20.13■□□□□ 0.81
DDR1-229ENST00000396342 SLC34A2O95436 690 aa20.13■□□□□ 0.81
DDR1-229ENST00000396342 BAG3O95817 575 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms