RNA–Protein interactions for RNA: ENST00000395946.2

XCR1-202, Transcript of X-C motif chemokine receptor 1, humanhuman

TSL 1 (best)

Gene XCR1, Length 332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-202ENST00000395946 SNCAIPQ9Y6H5 919 aa8.76□□□□□ -1.01
XCR1-202ENST00000395946 AOX1Q06278 1338 aa8.76□□□□□ -1.01
XCR1-202ENST00000395946 ZNF521Q96K83 1311 aa8.76□□□□□ -1.01
XCR1-202ENST00000395946 SALL1Q9NSC2 1324 aa8.76□□□□□ -1.01
XCR1-202ENST00000395946 HTTP42858 3142 aa8.75□□□□□ -1.01
XCR1-202ENST00000395946 SLC5A1P13866 664 aa8.75□□□□□ -1.01
XCR1-202ENST00000395946 FGFR2P21802 821 aa8.75□□□□□ -1.01
XCR1-202ENST00000395946 ZEB1P37275 1124 aaPredicted RBP8.75□□□□□ -1.01
XCR1-202ENST00000395946 NOL9Q5SY16 702 aaKnown RBP8.75□□□□□ -1.01
XCR1-202ENST00000395946 ANKRD23Q86SG2 305 aa8.75□□□□□ -1.01
XCR1-202ENST00000395946 FAM43AQ8N2R8 423 aa8.75□□□□□ -1.01
XCR1-202ENST00000395946 FAM151AQ8WW52 585 aa8.75□□□□□ -1.01
XCR1-202ENST00000395946 PUS3Q9BZE2 481 aaKnown RBP8.75□□□□□ -1.01
XCR1-202ENST00000395946 KCNH4Q9UQ05 1017 aa8.75□□□□□ -1.01
XCR1-202ENST00000395946 JAG2Q9Y219 1238 aa8.75□□□□□ -1.01
XCR1-202ENST00000395946 BTBD19C9JJ37 291 aa8.74□□□□□ -1.01
XCR1-202ENST00000395946 E9PSI1 815 aa8.74□□□□□ -1.01
XCR1-202ENST00000395946 EYA2O00167 538 aa8.74□□□□□ -1.01
XCR1-202ENST00000395946 IRF6O14896 467 aa8.74□□□□□ -1.01
XCR1-202ENST00000395946 CIAO1O76071 339 aa8.74□□□□□ -1.01
XCR1-202ENST00000395946 CT47B1P0C2W7 299 aaPredicted RBP8.74□□□□□ -1.01
XCR1-202ENST00000395946 CHAF1AQ13111 956 aaPredicted RBP8.74□□□□□ -1.01
XCR1-202ENST00000395946 MKRN4PQ13434 485 aaPredicted RBP8.74□□□□□ -1.01
XCR1-202ENST00000395946 ALDH1L2Q3SY69 923 aa8.74□□□□□ -1.01
XCR1-202ENST00000395946 APOBEC3HQ6NTF7 200 aaKnown RBP8.74□□□□□ -1.01
XCR1-202ENST00000395946 ZGPATQ8N5A5 531 aaKnown RBP8.74□□□□□ -1.01
XCR1-202ENST00000395946 ANKRD44Q8N8A2 993 aa8.74□□□□□ -1.01
XCR1-202ENST00000395946 GNL3LQ9NVN8 582 aaKnown RBP8.74□□□□□ -1.01
XCR1-202ENST00000395946 ZNF112Q9UJU3 913 aa8.74□□□□□ -1.01
XCR1-202ENST00000395946 PTCH2Q9Y6C5 1203 aa8.74□□□□□ -1.01
XCR1-202ENST00000395946 PDS5AQ29RF7 1337 aaKnown RBP8.74□□□□□ -1.01
XCR1-202ENST00000395946 CXCL11O14625 94 aa8.73□□□□□ -1.01
XCR1-202ENST00000395946 PRKCSHP14314 528 aaPredicted RBP8.73□□□□□ -1.01
XCR1-202ENST00000395946 EN2P19622 333 aaPredicted RBP8.73□□□□□ -1.01
XCR1-202ENST00000395946 SLC4A8Q2Y0W8 1093 aa8.73□□□□□ -1.01
XCR1-202ENST00000395946 C17orf99Q6UX52 265 aa8.73□□□□□ -1.01
XCR1-202ENST00000395946 CDAN1Q8IWY9 1227 aa8.73□□□□□ -1.01
XCR1-202ENST00000395946 SLF2Q8IX21 1173 aa8.73□□□□□ -1.01
XCR1-202ENST00000395946 MRPL50Q8N5N7 158 aaKnown RBP8.73□□□□□ -1.01
XCR1-202ENST00000395946 PARK7Q99497 189 aaKnown RBP8.73□□□□□ -1.01
XCR1-202ENST00000395946 SLC45A1Q9Y2W3 748 aa8.73□□□□□ -1.01
XCR1-202ENST00000395946 ENTPD3O75355 529 aa8.72□□□□□ -1.01
XCR1-202ENST00000395946 MAP4K4O95819 1239 aaPredicted RBP8.72□□□□□ -1.01
XCR1-202ENST00000395946 BCAMP50895 628 aa8.72□□□□□ -1.01
XCR1-202ENST00000395946 LRRC24Q50LG9 513 aa8.72□□□□□ -1.01
XCR1-202ENST00000395946 FASTKD5Q7L8L6 764 aaKnown RBP8.72□□□□□ -1.01
XCR1-202ENST00000395946 USP44Q9H0E7 712 aa8.72□□□□□ -1.01
XCR1-202ENST00000395946 SRRDQ9UH36 339 aa8.72□□□□□ -1.01
XCR1-202ENST00000395946 DENND2AQ9ULE3 1009 aa8.72□□□□□ -1.01
XCR1-202ENST00000395946 ADGRA2Q96PE1 1338 aa8.72□□□□□ -1.01
XCR1-202ENST00000395946 IGSF3O75054 1194 aa8.71□□□□□ -1.02
XCR1-202ENST00000395946 LDHBP07195 334 aaKnown RBP8.71□□□□□ -1.02
XCR1-202ENST00000395946 IL15P40933 162 aaPredicted RBP8.71□□□□□ -1.02
XCR1-202ENST00000395946 RFX5P48382 616 aaPredicted RBP8.71□□□□□ -1.02
XCR1-202ENST00000395946 FCGRTP55899 365 aa8.71□□□□□ -1.02
XCR1-202ENST00000395946 UBXN2AP68543 259 aa8.71□□□□□ -1.02
XCR1-202ENST00000395946 GRIK5Q16478 980 aa8.71□□□□□ -1.02
XCR1-202ENST00000395946 SLAIN1Q8ND83 568 aa8.71□□□□□ -1.02
XCR1-202ENST00000395946 ZKSCAN4Q969J2 545 aaPredicted RBP8.71□□□□□ -1.02
XCR1-202ENST00000395946 TRIM47Q96LD4 638 aa8.71□□□□□ -1.02
XCR1-202ENST00000395946 HTATIP2Q9BUP3 242 aa8.71□□□□□ -1.02
XCR1-202ENST00000395946 IDI2Q9BXS1 227 aa8.71□□□□□ -1.02
XCR1-202ENST00000395946 TBC1D2Q9BYX2 928 aa8.71□□□□□ -1.02
XCR1-202ENST00000395946 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.71□□□□□ -1.02
XCR1-202ENST00000395946 IQSEC3Q9UPP2 1182 aaPredicted RBP8.71□□□□□ -1.02
XCR1-202ENST00000395946 SALL2Q9Y467 1007 aaPredicted RBP8.71□□□□□ -1.02
XCR1-202ENST00000395946 DAGLAQ9Y4D2 1042 aa8.71□□□□□ -1.02
XCR1-202ENST00000395946 RFX7Q2KHR2 1363 aa8.71□□□□□ -1.02
XCR1-202ENST00000395946 ATRNL1Q5VV63 1379 aa8.71□□□□□ -1.02
XCR1-202ENST00000395946 COL2A1P02458 1487 aaPredicted RBP8.7□□□□□ -1.02
XCR1-202ENST00000395946 A0A1W2PPC1 479 aa8.7□□□□□ -1.02
XCR1-202ENST00000395946 PDHXO00330 501 aa8.7□□□□□ -1.02
XCR1-202ENST00000395946 GJB1P08034 283 aa8.7□□□□□ -1.02
XCR1-202ENST00000395946 UBTFL1P0CB47 393 aaPredicted RBP8.7□□□□□ -1.02
XCR1-202ENST00000395946 GRK4P32298 578 aa8.7□□□□□ -1.02
XCR1-202ENST00000395946 GJA8P48165 433 aa8.7□□□□□ -1.02
XCR1-202ENST00000395946 FXR1P51114 621 aaKnown RBP eCLIP8.7□□□□□ -1.02
XCR1-202ENST00000395946 CACNB3P54284 484 aa8.7□□□□□ -1.02
XCR1-202ENST00000395946 CAP1Q01518 475 aa8.7□□□□□ -1.02
XCR1-202ENST00000395946 MAP3K10Q02779 954 aa8.7□□□□□ -1.02
XCR1-202ENST00000395946 ATP2B3Q16720 1220 aa8.7□□□□□ -1.02
XCR1-202ENST00000395946 CDC42EP5Q6NZY7 148 aa8.7□□□□□ -1.02
XCR1-202ENST00000395946 SCYL3Q8IZE3 742 aa8.7□□□□□ -1.02
XCR1-202ENST00000395946 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.7□□□□□ -1.02
XCR1-202ENST00000395946 RAET1EQ8TD07 263 aa8.7□□□□□ -1.02
XCR1-202ENST00000395946 FAM163AQ96GL9 167 aaPredicted RBP8.7□□□□□ -1.02
XCR1-202ENST00000395946 CEP126Q9P2H0 1117 aa8.7□□□□□ -1.02
XCR1-202ENST00000395946 GAKO14976 1311 aa8.7□□□□□ -1.02
XCR1-202ENST00000395946 BRCA2P51587 3418 aa8.69□□□□□ -1.02
XCR1-202ENST00000395946 A0A0G2JLL6 359 aaPredicted RBP8.69□□□□□ -1.02
XCR1-202ENST00000395946 ZNF316A6NFI3 1004 aaPredicted RBP8.69□□□□□ -1.02
XCR1-202ENST00000395946 BCRP11274 1271 aa8.69□□□□□ -1.02
XCR1-202ENST00000395946 OSBPP22059 807 aa8.69□□□□□ -1.02
XCR1-202ENST00000395946 PRDX5P30044 214 aa8.69□□□□□ -1.02
XCR1-202ENST00000395946 INPP5BP32019 993 aa8.69□□□□□ -1.02
XCR1-202ENST00000395946 PSMC4P43686 418 aa8.69□□□□□ -1.02
XCR1-202ENST00000395946 IRF5Q13568 498 aa8.69□□□□□ -1.02
XCR1-202ENST00000395946 SPTY2D1Q68D10 685 aaPredicted RBP8.69□□□□□ -1.02
XCR1-202ENST00000395946 ATG9AQ7Z3C6 839 aa8.69□□□□□ -1.02
XCR1-202ENST00000395946 PRRT2Q7Z6L0 340 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms