RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 PTCH2Q9Y6C5 1203 aa11.22□□□□□ -0.61
TRAV20-201ENST00000390448 SNCAIPQ9Y6H5 919 aa11.22□□□□□ -0.61
TRAV20-201ENST00000390448 ZNF521Q96K83 1311 aa11.21□□□□□ -0.61
TRAV20-201ENST00000390448 BTBD19C9JJ37 291 aa11.21□□□□□ -0.61
TRAV20-201ENST00000390448 TLR2O60603 784 aa11.21□□□□□ -0.61
TRAV20-201ENST00000390448 FGFR2P21802 821 aa11.21□□□□□ -0.61
TRAV20-201ENST00000390448 PPATQ06203 517 aa11.21□□□□□ -0.61
TRAV20-201ENST00000390448 PPIL2Q13356 520 aa11.21□□□□□ -0.61
TRAV20-201ENST00000390448 ATP2B3Q16720 1220 aa11.21□□□□□ -0.61
TRAV20-201ENST00000390448 ALDH1L2Q3SY69 923 aa11.21□□□□□ -0.61
TRAV20-201ENST00000390448 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.21□□□□□ -0.61
TRAV20-201ENST00000390448 FAM151AQ8WW52 585 aa11.21□□□□□ -0.61
TRAV20-201ENST00000390448 ZCCHC17Q9NP64 241 aaKnown RBP11.21□□□□□ -0.61
TRAV20-201ENST00000390448 USP40Q9NVE5 1235 aa11.21□□□□□ -0.61
TRAV20-201ENST00000390448 KIAA0100Q14667 2235 aaKnown RBP11.2□□□□□ -0.62
TRAV20-201ENST00000390448 GNRH1P01148 92 aa11.2□□□□□ -0.62
TRAV20-201ENST00000390448 HOXD10P28358 340 aa11.2□□□□□ -0.62
TRAV20-201ENST00000390448 LACTBP83111 547 aaPredicted RBP11.2□□□□□ -0.62
TRAV20-201ENST00000390448 SLFN5Q08AF3 891 aa11.2□□□□□ -0.62
TRAV20-201ENST00000390448 DIXDC1Q155Q3 683 aa11.2□□□□□ -0.62
TRAV20-201ENST00000390448 CDC42EP5Q6NZY7 148 aa11.2□□□□□ -0.62
TRAV20-201ENST00000390448 ZSCAN29Q8IWY8 852 aaPredicted RBP11.2□□□□□ -0.62
TRAV20-201ENST00000390448 ZNF333Q96JL9 665 aa11.2□□□□□ -0.62
TRAV20-201ENST00000390448 DENND2AQ9ULE3 1009 aa11.2□□□□□ -0.62
TRAV20-201ENST00000390448 PDHXO00330 501 aa11.19□□□□□ -0.62
TRAV20-201ENST00000390448 FMNL1O95466 1100 aaPredicted RBP11.19□□□□□ -0.62
TRAV20-201ENST00000390448 PRDX5P30044 214 aa11.19□□□□□ -0.62
TRAV20-201ENST00000390448 INPP5BP32019 993 aa11.19□□□□□ -0.62
TRAV20-201ENST00000390448 IL15P40933 162 aaPredicted RBP11.19□□□□□ -0.62
TRAV20-201ENST00000390448 RFX5P48382 616 aaPredicted RBP11.19□□□□□ -0.62
TRAV20-201ENST00000390448 PRMT2P55345 433 aa11.19□□□□□ -0.62
TRAV20-201ENST00000390448 ATG9AQ7Z3C6 839 aa11.19□□□□□ -0.62
TRAV20-201ENST00000390448 DZIP1Q86YF9 867 aaKnown RBP11.19□□□□□ -0.62
TRAV20-201ENST00000390448 ZGPATQ8N5A5 531 aaKnown RBP11.19□□□□□ -0.62
TRAV20-201ENST00000390448 SH3TC2Q8TF17 1288 aa11.19□□□□□ -0.62
TRAV20-201ENST00000390448 API5Q9BZZ5 524 aaKnown RBP11.19□□□□□ -0.62
TRAV20-201ENST00000390448 PICK1Q9NRD5 415 aa11.19□□□□□ -0.62
TRAV20-201ENST00000390448 BIN2Q9UBW5 565 aaPredicted RBP11.19□□□□□ -0.62
TRAV20-201ENST00000390448 CPA4Q9UI42 421 aa11.19□□□□□ -0.62
TRAV20-201ENST00000390448 FBXO3Q9UK99 471 aa11.19□□□□□ -0.62
TRAV20-201ENST00000390448 NOB1Q9ULX3 412 aaKnown RBP11.19□□□□□ -0.62
TRAV20-201ENST00000390448 DAGLAQ9Y4D2 1042 aa11.19□□□□□ -0.62
TRAV20-201ENST00000390448 BRCA2P51587 3418 aa11.18□□□□□ -0.62
TRAV20-201ENST00000390448 SEMA3EO15041 775 aa11.18□□□□□ -0.62
TRAV20-201ENST00000390448 CIAO1O76071 339 aa11.18□□□□□ -0.62
TRAV20-201ENST00000390448 PSMC4P43686 418 aa11.18□□□□□ -0.62
TRAV20-201ENST00000390448 CAP1Q01518 475 aa11.18□□□□□ -0.62
TRAV20-201ENST00000390448 ANKRD23Q86SG2 305 aa11.18□□□□□ -0.62
TRAV20-201ENST00000390448 SLF2Q8IX21 1173 aa11.18□□□□□ -0.62
TRAV20-201ENST00000390448 RAET1EQ8TD07 263 aa11.18□□□□□ -0.62
TRAV20-201ENST00000390448 CDCA7LQ96GN5 454 aa11.18□□□□□ -0.62
TRAV20-201ENST00000390448 ARHGAP39Q9C0H5 1083 aa11.18□□□□□ -0.62
TRAV20-201ENST00000390448 ABCF2Q9UG63 623 aa11.18□□□□□ -0.62
TRAV20-201ENST00000390448 LRRFIP2Q9Y608 721 aaKnown RBP11.18□□□□□ -0.62
TRAV20-201ENST00000390448 RPAP1Q9BWH6 1393 aaPredicted RBP11.17□□□□□ -0.62
TRAV20-201ENST00000390448 NFIAQ12857 509 aa11.17□□□□□ -0.62
TRAV20-201ENST00000390448 HABP4Q5JVS0 413 aaKnown RBP11.17□□□□□ -0.62
TRAV20-201ENST00000390448 SPTY2D1Q68D10 685 aaPredicted RBP11.17□□□□□ -0.62
TRAV20-201ENST00000390448 PARK7Q99497 189 aaKnown RBP11.17□□□□□ -0.62
TRAV20-201ENST00000390448 OTOFQ9HC10 1997 aa11.17□□□□□ -0.62
TRAV20-201ENST00000390448 ARAP2Q8WZ64 1704 aa11.17□□□□□ -0.62
TRAV20-201ENST00000390448 CT47B1P0C2W7 299 aaPredicted RBP11.16□□□□□ -0.62
TRAV20-201ENST00000390448 PHKA1P46020 1223 aa11.16□□□□□ -0.62
TRAV20-201ENST00000390448 RGS3P49796 1198 aa11.16□□□□□ -0.62
TRAV20-201ENST00000390448 GORABQ5T7V8 394 aa11.16□□□□□ -0.62
TRAV20-201ENST00000390448 CCDC102BQ68D86 513 aa11.16□□□□□ -0.62
TRAV20-201ENST00000390448 C17orf99Q6UX52 265 aa11.16□□□□□ -0.62
TRAV20-201ENST00000390448 FASTKD5Q7L8L6 764 aaKnown RBP11.16□□□□□ -0.62
TRAV20-201ENST00000390448 ZNF112Q9UJU3 913 aa11.16□□□□□ -0.62
TRAV20-201ENST00000390448 PA2G4Q9UQ80 394 aaKnown RBP11.16□□□□□ -0.62
TRAV20-201ENST00000390448 AKAP2Q9Y2D5 859 aa11.16□□□□□ -0.62
TRAV20-201ENST00000390448 ZHX2Q9Y6X8 837 aa11.16□□□□□ -0.62
TRAV20-201ENST00000390448 SALL1Q9NSC2 1324 aa11.15□□□□□ -0.62
TRAV20-201ENST00000390448 CXCL11O14625 94 aa11.15□□□□□ -0.62
TRAV20-201ENST00000390448 ENTPD3O75355 529 aa11.15□□□□□ -0.62
TRAV20-201ENST00000390448 FCGRTP55899 365 aa11.15□□□□□ -0.62
TRAV20-201ENST00000390448 TIMM10P62072 90 aa11.15□□□□□ -0.62
TRAV20-201ENST00000390448 PICALMQ13492 652 aa11.15□□□□□ -0.62
TRAV20-201ENST00000390448 GADL1Q6ZQY3 521 aa11.15□□□□□ -0.62
TRAV20-201ENST00000390448 TRIM47Q96LD4 638 aa11.15□□□□□ -0.62
TRAV20-201ENST00000390448 NEUROD6Q96NK8 337 aa11.15□□□□□ -0.62
TRAV20-201ENST00000390448 FAM198AQ9UFP1 575 aa11.15□□□□□ -0.62
TRAV20-201ENST00000390448 SRRDQ9UH36 339 aa11.15□□□□□ -0.62
TRAV20-201ENST00000390448 KCNH4Q9UQ05 1017 aa11.15□□□□□ -0.62
TRAV20-201ENST00000390448 AK9Q5TCS8 1911 aa11.15□□□□□ -0.62
TRAV20-201ENST00000390448 MYPNQ86TC9 1320 aa11.14□□□□□ -0.63
TRAV20-201ENST00000390448 SRGAP3O43295 1099 aa11.14□□□□□ -0.63
TRAV20-201ENST00000390448 GNAI3P08754 354 aa11.14□□□□□ -0.63
TRAV20-201ENST00000390448 CYP2C8P10632 490 aa11.14□□□□□ -0.63
TRAV20-201ENST00000390448 OSBPP22059 807 aa11.14□□□□□ -0.63
TRAV20-201ENST00000390448 ADORA1P30542 326 aa11.14□□□□□ -0.63
TRAV20-201ENST00000390448 GRK4P32298 578 aa11.14□□□□□ -0.63
TRAV20-201ENST00000390448 UBXN2AP68543 259 aa11.14□□□□□ -0.63
TRAV20-201ENST00000390448 MVPQ14764 893 aaKnown RBP11.14□□□□□ -0.63
TRAV20-201ENST00000390448 NOL9Q5SY16 702 aaKnown RBP11.14□□□□□ -0.63
TRAV20-201ENST00000390448 ERICH6Q7L0X2 663 aa11.14□□□□□ -0.63
TRAV20-201ENST00000390448 ZFPM1Q8IX07 1006 aa11.14□□□□□ -0.63
TRAV20-201ENST00000390448 SCYL3Q8IZE3 742 aa11.14□□□□□ -0.63
TRAV20-201ENST00000390448 NKX2-3Q8TAU0 364 aa11.14□□□□□ -0.63
TRAV20-201ENST00000390448 SMCR8Q8TEV9 937 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms