RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 FERMT1Q9BQL6 677 aa15.81■□□□□ 0.12
SNPH-201ENST00000381867 TBCAO75347 108 aaKnown RBP15.81■□□□□ 0.12
SNPH-201ENST00000381867 LMBR1Q8WVP7 490 aa15.81■□□□□ 0.12
SNPH-201ENST00000381867 SELENOSQ9BQE4 189 aa15.81■□□□□ 0.12
SNPH-201ENST00000381867 FAM98CQ17RN3 349 aaKnown RBP15.81■□□□□ 0.12
SNPH-201ENST00000381867 TRPC5Q9UL62 973 aaPredicted RBP15.81■□□□□ 0.12
SNPH-201ENST00000381867 A0A1B0GUL7 405 aa15.81■□□□□ 0.12
SNPH-201ENST00000381867 SPTLC2O15270 562 aa15.81■□□□□ 0.12
SNPH-201ENST00000381867 IGSF3O75054 1194 aa15.81■□□□□ 0.12
SNPH-201ENST00000381867 WTAPQ15007 396 aa15.81■□□□□ 0.12
SNPH-201ENST00000381867 NAA16Q6N069 864 aaPredicted RBP15.81■□□□□ 0.12
SNPH-201ENST00000381867 JARID2Q92833 1246 aaPredicted RBP15.81■□□□□ 0.12
SNPH-201ENST00000381867 PUF60Q9UHX1 559 aaKnown RBP15.81■□□□□ 0.12
SNPH-201ENST00000381867 TRPM1Q7Z4N2 1603 aa15.81■□□□□ 0.12
SNPH-201ENST00000381867 GRM1Q13255 1194 aa15.8■□□□□ 0.12
SNPH-201ENST00000381867 KARSQ15046 597 aaKnown RBP15.8■□□□□ 0.12
SNPH-201ENST00000381867 GBP6Q6ZN66 633 aa15.8■□□□□ 0.12
SNPH-201ENST00000381867 ZC3H12CQ9C0D7 883 aaKnown RBP15.8■□□□□ 0.12
SNPH-201ENST00000381867 CLEC11AQ9Y240 323 aa15.8■□□□□ 0.12
SNPH-201ENST00000381867 ZNF569Q5MCW4 686 aa15.8■□□□□ 0.12
SNPH-201ENST00000381867 Q6ZUG5 572 aa15.8■□□□□ 0.12
SNPH-201ENST00000381867 CPLX4Q7Z7G2 160 aa15.8■□□□□ 0.12
SNPH-201ENST00000381867 PHACTR2O75167 634 aa15.8■□□□□ 0.12
SNPH-201ENST00000381867 CYP7A1P22680 504 aa15.8■□□□□ 0.12
SNPH-201ENST00000381867 OGFOD1Q8N543 542 aa15.8■□□□□ 0.12
SNPH-201ENST00000381867 INTS4Q96HW7 963 aaKnown RBP15.8■□□□□ 0.12
SNPH-201ENST00000381867 SMC6Q96SB8 1091 aa15.8■□□□□ 0.12
SNPH-201ENST00000381867 ARHGEF40Q8TER5 1519 aa15.8■□□□□ 0.12
SNPH-201ENST00000381867 ZEB2O60315 1214 aa15.8■□□□□ 0.12
SNPH-201ENST00000381867 RHOXF2BP0C7M4 288 aa15.8■□□□□ 0.12
SNPH-201ENST00000381867 VAV2P52735 878 aa15.8■□□□□ 0.12
SNPH-201ENST00000381867 RHOXF2Q9BQY4 288 aa15.8■□□□□ 0.12
SNPH-201ENST00000381867 PAG1Q9NWQ8 432 aa15.8■□□□□ 0.12
SNPH-201ENST00000381867 SERPINA10Q9UK55 444 aa15.8■□□□□ 0.12
SNPH-201ENST00000381867 MARCKSP29966 332 aaPredicted RBP15.79■□□□□ 0.12
SNPH-201ENST00000381867 CWF19L2Q2TBE0 894 aaKnown RBP15.79■□□□□ 0.12
SNPH-201ENST00000381867 RSRC1Q96IZ7 334 aaKnown RBP15.79■□□□□ 0.12
SNPH-201ENST00000381867 CAPZA3Q96KX2 299 aa15.79■□□□□ 0.12
SNPH-201ENST00000381867 IFNKQ9P0W0 207 aa15.79■□□□□ 0.12
SNPH-201ENST00000381867 GNAQP50148 359 aa15.79■□□□□ 0.12
SNPH-201ENST00000381867 GTF3C6Q969F1 213 aa15.79■□□□□ 0.12
SNPH-201ENST00000381867 TCEANC2Q96MN5 208 aa15.79■□□□□ 0.12
SNPH-201ENST00000381867 DENND2AQ9ULE3 1009 aa15.79■□□□□ 0.12
SNPH-201ENST00000381867 WDR17Q8IZU2 1322 aa15.79■□□□□ 0.12
SNPH-201ENST00000381867 ESR2Q92731 530 aa15.79■□□□□ 0.12
SNPH-201ENST00000381867 CCDC42Q96M95 316 aa15.79■□□□□ 0.12
SNPH-201ENST00000381867 LGR6Q9HBX8 967 aa15.79■□□□□ 0.12
SNPH-201ENST00000381867 LZTFL1Q9NQ48 299 aa15.79■□□□□ 0.12
SNPH-201ENST00000381867 CEP83Q9Y592 693 aa15.79■□□□□ 0.12
SNPH-201ENST00000381867 LRRC2Q9BYS8 371 aa15.79■□□□□ 0.12
SNPH-201ENST00000381867 CCDC160A6NGH7 325 aa15.78■□□□□ 0.12
SNPH-201ENST00000381867 EYA2O00167 538 aa15.78■□□□□ 0.12
SNPH-201ENST00000381867 KRT13P13646 458 aa15.78■□□□□ 0.12
SNPH-201ENST00000381867 GUCA1BQ9UMX6 200 aa15.78■□□□□ 0.12
SNPH-201ENST00000381867 PPM1FP49593 454 aaPredicted RBP15.78■□□□□ 0.12
SNPH-201ENST00000381867 CCDC174Q6PII3 467 aa15.78■□□□□ 0.12
SNPH-201ENST00000381867 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.78■□□□□ 0.12
SNPH-201ENST00000381867 THRAP3Q9Y2W1 955 aaKnown RBP15.78■□□□□ 0.12
SNPH-201ENST00000381867 RTN1Q16799 776 aa15.78■□□□□ 0.12
SNPH-201ENST00000381867 CEP152O94986 1710 aa15.78■□□□□ 0.12
SNPH-201ENST00000381867 RNF113AO15541 343 aaKnown RBP15.78■□□□□ 0.12
SNPH-201ENST00000381867 EVCP57679 992 aa15.78■□□□□ 0.12
SNPH-201ENST00000381867 ZBTB16Q05516 673 aa15.78■□□□□ 0.12
SNPH-201ENST00000381867 KRBA2Q6ZNG9 492 aa15.78■□□□□ 0.12
SNPH-201ENST00000381867 ERMNQ8TAM6 284 aa15.78■□□□□ 0.12
SNPH-201ENST00000381867 SAMD15Q9P1V8 674 aa15.78■□□□□ 0.12
SNPH-201ENST00000381867 COMMD10Q9Y6G5 202 aa15.78■□□□□ 0.12
SNPH-201ENST00000381867 ZNF772Q68DY9 489 aaPredicted RBP15.77■□□□□ 0.12
SNPH-201ENST00000381867 MPHOSPH6Q99547 160 aaKnown RBP15.77■□□□□ 0.12
SNPH-201ENST00000381867 BICC1Q9H694 974 aaKnown RBP15.77■□□□□ 0.12
SNPH-201ENST00000381867 ZBTB7BO15156 539 aaPredicted RBP15.77■□□□□ 0.12
SNPH-201ENST00000381867 SAMM50Q9Y512 469 aa15.77■□□□□ 0.12
SNPH-201ENST00000381867 ATP2A1O14983 1001 aa15.77■□□□□ 0.11
SNPH-201ENST00000381867 BAG6P46379 1132 aa15.77■□□□□ 0.11
SNPH-201ENST00000381867 PPP2R3AQ06190 1150 aa15.77■□□□□ 0.11
SNPH-201ENST00000381867 KRT24Q2M2I5 525 aa15.77■□□□□ 0.11
SNPH-201ENST00000381867 GRIPAP1Q4V328 841 aa15.77■□□□□ 0.11
SNPH-201ENST00000381867 DDX17Q92841 729 aaKnown RBP15.77■□□□□ 0.11
SNPH-201ENST00000381867 CFAP57Q96MR6 1250 aa15.77■□□□□ 0.11
SNPH-201ENST00000381867 MMRN2Q9H8L6 949 aa15.77■□□□□ 0.11
SNPH-201ENST00000381867 TULP4Q9NRJ4 1543 aa15.77■□□□□ 0.11
SNPH-201ENST00000381867 MAST3O60307 1309 aa15.76■□□□□ 0.11
SNPH-201ENST00000381867 F8W031 263 aaPredicted RBP15.76■□□□□ 0.11
SNPH-201ENST00000381867 U2AF2P26368 475 aaKnown RBP eCLIP15.76■□□□□ 0.11
SNPH-201ENST00000381867 CFAP58Q5T655 872 aa15.76■□□□□ 0.11
SNPH-201ENST00000381867 DHX58Q96C10 678 aa15.76■□□□□ 0.11
SNPH-201ENST00000381867 PRR36Q9H6K5 1346 aa15.76■□□□□ 0.11
SNPH-201ENST00000381867 AK2P54819 239 aa15.76■□□□□ 0.11
SNPH-201ENST00000381867 GABPB1Q06547 395 aaPredicted RBP15.76■□□□□ 0.11
SNPH-201ENST00000381867 DNAJC21Q5F1R6 531 aaKnown RBP15.76■□□□□ 0.11
SNPH-201ENST00000381867 TNNC1P63316 161 aa15.76■□□□□ 0.11
SNPH-201ENST00000381867 ASIC1P78348 528 aa15.76■□□□□ 0.11
SNPH-201ENST00000381867 RRAGDQ9NQL2 400 aaPredicted RBP15.76■□□□□ 0.11
SNPH-201ENST00000381867 SUPT20HQ8NEM7 779 aa15.76■□□□□ 0.11
SNPH-201ENST00000381867 PUM3Q15397 648 aaKnown RBP15.75■□□□□ 0.11
SNPH-201ENST00000381867 JDP2Q8WYK2 163 aa15.75■□□□□ 0.11
SNPH-201ENST00000381867 ZNF496Q96IT1 587 aaPredicted RBP15.75■□□□□ 0.11
SNPH-201ENST00000381867 SLC4A4Q9Y6R1 1079 aa15.75■□□□□ 0.11
SNPH-201ENST00000381867 E9PCH4 1651 aa15.75■□□□□ 0.11
SNPH-201ENST00000381867 UBXN1Q04323 297 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms