RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 PPATQ06203 517 aa20.02■□□□□ 0.8
VCX3A-201ENST00000381089 APOBEC3HQ6NTF7 200 aaKnown RBP20.02■□□□□ 0.8
VCX3A-201ENST00000381089 MRPL50Q8N5N7 158 aaKnown RBP20.02■□□□□ 0.8
VCX3A-201ENST00000381089 KLHDC4Q8TBB5 520 aa20.01■□□□□ 0.79
VCX3A-201ENST00000381089 LPIN2Q92539 896 aa20■□□□□ 0.79
VCX3A-201ENST00000381089 EYA2O00167 538 aa19.99■□□□□ 0.79
VCX3A-201ENST00000381089 FGFR2P21802 821 aa19.99■□□□□ 0.79
VCX3A-201ENST00000381089 MIGA2Q7L4E1 593 aa19.99■□□□□ 0.79
VCX3A-201ENST00000381089 FAM151AQ8WW52 585 aa19.99■□□□□ 0.79
VCX3A-201ENST00000381089 GNL3LQ9NVN8 582 aaKnown RBP19.99■□□□□ 0.79
VCX3A-201ENST00000381089 MYH13Q9UKX3 1938 aa19.98■□□□□ 0.79
VCX3A-201ENST00000381089 MYCP01106 439 aaPredicted RBP19.98■□□□□ 0.79
VCX3A-201ENST00000381089 HOXD10P28358 340 aa19.98■□□□□ 0.79
VCX3A-201ENST00000381089 USP44Q9H0E7 712 aa19.98■□□□□ 0.79
VCX3A-201ENST00000381089 ANKRD23Q86SG2 305 aa19.97■□□□□ 0.79
VCX3A-201ENST00000381089 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.97■□□□□ 0.79
VCX3A-201ENST00000381089 SH3TC2Q8TF17 1288 aa19.97■□□□□ 0.79
VCX3A-201ENST00000381089 ARHGAP39Q9C0H5 1083 aa19.97■□□□□ 0.79
VCX3A-201ENST00000381089 ZNF521Q96K83 1311 aa19.97■□□□□ 0.79
VCX3A-201ENST00000381089 AK9Q5TCS8 1911 aa19.96■□□□□ 0.79
VCX3A-201ENST00000381089 E9PSI1 815 aa19.96■□□□□ 0.79
VCX3A-201ENST00000381089 PDHXO00330 501 aa19.95■□□□□ 0.78
VCX3A-201ENST00000381089 LDHBP07195 334 aaKnown RBP19.95■□□□□ 0.78
VCX3A-201ENST00000381089 INPP5BP32019 993 aa19.95■□□□□ 0.78
VCX3A-201ENST00000381089 TCP10Q12799 353 aa19.95■□□□□ 0.78
VCX3A-201ENST00000381089 C17orf99Q6UX52 265 aa19.95■□□□□ 0.78
VCX3A-201ENST00000381089 SSH1Q8WYL5 1049 aa19.95■□□□□ 0.78
VCX3A-201ENST00000381089 CPA4Q9UI42 421 aa19.95■□□□□ 0.78
VCX3A-201ENST00000381089 FBXO3Q9UK99 471 aa19.95■□□□□ 0.78
VCX3A-201ENST00000381089 DAGLAQ9Y4D2 1042 aa19.95■□□□□ 0.78
VCX3A-201ENST00000381089 FMNL1O95466 1100 aaPredicted RBP19.94■□□□□ 0.78
VCX3A-201ENST00000381089 PSMC4P43686 418 aa19.94■□□□□ 0.78
VCX3A-201ENST00000381089 CDC42EP5Q6NZY7 148 aa19.94■□□□□ 0.78
VCX3A-201ENST00000381089 NKX2-3Q8TAU0 364 aa19.94■□□□□ 0.78
VCX3A-201ENST00000381089 RAET1EQ8TD07 263 aa19.94■□□□□ 0.78
VCX3A-201ENST00000381089 PARK7Q99497 189 aaKnown RBP19.94■□□□□ 0.78
VCX3A-201ENST00000381089 CEP126Q9P2H0 1117 aa19.94■□□□□ 0.78
VCX3A-201ENST00000381089 SRRDQ9UH36 339 aa19.94■□□□□ 0.78
VCX3A-201ENST00000381089 ZNF112Q9UJU3 913 aa19.94■□□□□ 0.78
VCX3A-201ENST00000381089 KCNH4Q9UQ05 1017 aa19.94■□□□□ 0.78
VCX3A-201ENST00000381089 HDAC5Q9UQL6 1122 aa19.94■□□□□ 0.78
VCX3A-201ENST00000381089 RFX5P48382 616 aaPredicted RBP19.93■□□□□ 0.78
VCX3A-201ENST00000381089 DIXDC1Q155Q3 683 aa19.93■□□□□ 0.78
VCX3A-201ENST00000381089 ATP2B3Q16720 1220 aa19.93■□□□□ 0.78
VCX3A-201ENST00000381089 NOL9Q5SY16 702 aaKnown RBP19.93■□□□□ 0.78
VCX3A-201ENST00000381089 ZGPATQ8N5A5 531 aaKnown RBP19.93■□□□□ 0.78
VCX3A-201ENST00000381089 DENND2AQ9ULE3 1009 aa19.93■□□□□ 0.78
VCX3A-201ENST00000381089 SEMA3EO15041 775 aa19.92■□□□□ 0.78
VCX3A-201ENST00000381089 CIAO1O76071 339 aa19.92■□□□□ 0.78
VCX3A-201ENST00000381089 ECM2O94769 699 aaPredicted RBP19.92■□□□□ 0.78
VCX3A-201ENST00000381089 UBTFL1P0CB47 393 aaPredicted RBP19.92■□□□□ 0.78
VCX3A-201ENST00000381089 ALDH1L2Q3SY69 923 aa19.92■□□□□ 0.78
VCX3A-201ENST00000381089 USP40Q9NVE5 1235 aa19.92■□□□□ 0.78
VCX3A-201ENST00000381089 ZSWIM8A7E2V4 1837 aa19.91■□□□□ 0.78
VCX3A-201ENST00000381089 CXCL11O14625 94 aa19.91■□□□□ 0.78
VCX3A-201ENST00000381089 PRDX5P30044 214 aa19.91■□□□□ 0.78
VCX3A-201ENST00000381089 NFIAQ12857 509 aa19.91■□□□□ 0.78
VCX3A-201ENST00000381089 TRIM47Q96LD4 638 aa19.91■□□□□ 0.78
VCX3A-201ENST00000381089 SIL1Q9H173 461 aa19.91■□□□□ 0.78
VCX3A-201ENST00000381089 SMC4Q9NTJ3 1288 aa19.91■□□□□ 0.78
VCX3A-201ENST00000381089 MYPNQ86TC9 1320 aa19.91■□□□□ 0.78
VCX3A-201ENST00000381089 SALL1Q9NSC2 1324 aa19.91■□□□□ 0.78
VCX3A-201ENST00000381089 OSBPP22059 807 aa19.9■□□□□ 0.78
VCX3A-201ENST00000381089 GRK4P32298 578 aa19.9■□□□□ 0.78
VCX3A-201ENST00000381089 FXR1P51114 621 aaKnown RBP eCLIP19.9■□□□□ 0.78
VCX3A-201ENST00000381089 FCGRTP55899 365 aa19.9■□□□□ 0.78
VCX3A-201ENST00000381089 FASTKD5Q7L8L6 764 aaKnown RBP19.9■□□□□ 0.78
VCX3A-201ENST00000381089 ATG9AQ7Z3C6 839 aa19.9■□□□□ 0.78
VCX3A-201ENST00000381089 PICK1Q9NRD5 415 aa19.9■□□□□ 0.78
VCX3A-201ENST00000381089 BIN2Q9UBW5 565 aaPredicted RBP19.9■□□□□ 0.78
VCX3A-201ENST00000381089 COLQQ9Y215 455 aaPredicted RBP19.9■□□□□ 0.78
VCX3A-201ENST00000381089 IL15P40933 162 aaPredicted RBP19.89■□□□□ 0.77
VCX3A-201ENST00000381089 UBXN2AP68543 259 aa19.89■□□□□ 0.77
VCX3A-201ENST00000381089 SLF2Q8IX21 1173 aa19.89■□□□□ 0.77
VCX3A-201ENST00000381089 FAM198AQ9UFP1 575 aa19.89■□□□□ 0.77
VCX3A-201ENST00000381089 ADGRA2Q96PE1 1338 aa19.88■□□□□ 0.77
VCX3A-201ENST00000381089 DPF3Q92784 378 aa19.88■□□□□ 0.77
VCX3A-201ENST00000381089 H0YGN5 161 aa19.87■□□□□ 0.77
VCX3A-201ENST00000381089 ENTPD3O75355 529 aa19.87■□□□□ 0.77
VCX3A-201ENST00000381089 MTFR1Q15390 333 aa19.87■□□□□ 0.77
VCX3A-201ENST00000381089 DZIP1Q86YF9 867 aaKnown RBP19.87■□□□□ 0.77
VCX3A-201ENST00000381089 ZSCAN29Q8IWY8 852 aaPredicted RBP19.87■□□□□ 0.77
VCX3A-201ENST00000381089 SCYL3Q8IZE3 742 aa19.87■□□□□ 0.77
VCX3A-201ENST00000381089 HTATIP2Q9BUP3 242 aa19.87■□□□□ 0.77
VCX3A-201ENST00000381089 IDI2Q9BXS1 227 aa19.87■□□□□ 0.77
VCX3A-201ENST00000381089 LRRFIP2Q9Y608 721 aaKnown RBP19.87■□□□□ 0.77
VCX3A-201ENST00000381089 CEP290O15078 2479 aa19.87■□□□□ 0.77
VCX3A-201ENST00000381089 CTGFP29279 349 aa19.86■□□□□ 0.77
VCX3A-201ENST00000381089 RGS3P49796 1198 aa19.86■□□□□ 0.77
VCX3A-201ENST00000381089 SLFN5Q08AF3 891 aa19.86■□□□□ 0.77
VCX3A-201ENST00000381089 MOGSQ13724 837 aa19.86■□□□□ 0.77
VCX3A-201ENST00000381089 SPTY2D1Q68D10 685 aaPredicted RBP19.86■□□□□ 0.77
VCX3A-201ENST00000381089 SLAIN1Q8ND83 568 aa19.86■□□□□ 0.77
VCX3A-201ENST00000381089 RNF208Q9H0X6 261 aa19.86■□□□□ 0.77
VCX3A-201ENST00000381089 ZHX2Q9Y6X8 837 aa19.86■□□□□ 0.77
VCX3A-201ENST00000381089 ZBTB22O15209 634 aa19.85■□□□□ 0.77
VCX3A-201ENST00000381089 GJB1P08034 283 aa19.85■□□□□ 0.77
VCX3A-201ENST00000381089 CYP2C8P10632 490 aa19.85■□□□□ 0.77
VCX3A-201ENST00000381089 BCRP11274 1271 aa19.85■□□□□ 0.77
VCX3A-201ENST00000381089 CCL5P13501 91 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms