RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 LIN7AO14910 233 aaPredicted RBP7.5□□□□□ -1.21
RIPK1-202ENST00000380409 EIF3HO15372 352 aaKnown RBP eCLIP7.5□□□□□ -1.21
RIPK1-202ENST00000380409 IRAK1P51617 712 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 ACTN3Q08043 901 aaPredicted RBP7.5□□□□□ -1.21
RIPK1-202ENST00000380409 CPSF1Q10570 1443 aaKnown RBP7.5□□□□□ -1.21
RIPK1-202ENST00000380409 CAMK4Q16566 473 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 FILIP1LQ4L180 1135 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 C1orf141Q5JVX7 400 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 PGBD1Q96JS3 809 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 MAF1Q9H063 256 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 KAT14Q9H8E8 782 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 EBF2Q9HAK2 575 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 GGA2Q9UJY4 613 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 METP08581 1390 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 MAP3K5Q99683 1374 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 AGPSO00116 658 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 NR1I2O75469 434 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 ECEL1O95672 775 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 CCT5P48643 541 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 SPATA21Q7Z572 469 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 HSD3B7Q9H2F3 369 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 SENP2Q9HC62 589 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 CPSF2Q9P2I0 782 aaKnown RBP7.49□□□□□ -1.21
RIPK1-202ENST00000380409 CAPN7Q9Y6W3 813 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 POTEB2H3BUK9 544 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 CUTAO60888 179 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 CWF19L1Q69YN2 538 aaKnown RBP7.49□□□□□ -1.21
RIPK1-202ENST00000380409 NFXL1Q6ZNB6 911 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 ZBTB10Q96DT7 871 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 ACSBG1Q96GR2 724 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 UPF3BQ9BZI7 483 aaKnown RBP7.49□□□□□ -1.21
RIPK1-202ENST00000380409 TMX4Q9H1E5 349 aaPredicted RBP7.49□□□□□ -1.21
RIPK1-202ENST00000380409 IL25Q9H293 177 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 ZRANB1Q9UGI0 708 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 LARGE1O95461 756 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 UBTFL1P0CB47 393 aaPredicted RBP7.49□□□□□ -1.21
RIPK1-202ENST00000380409 SPATS2Q86XZ4 545 aaKnown RBP7.49□□□□□ -1.21
RIPK1-202ENST00000380409 NBPF15Q8N660 670 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 ANKRD44Q8N8A2 993 aa7.49□□□□□ -1.21
RIPK1-202ENST00000380409 SPDYE1Q8NFV5 336 aaPredicted RBP7.49□□□□□ -1.21
RIPK1-202ENST00000380409 MEFVO15553 781 aaPredicted RBP7.48□□□□□ -1.21
RIPK1-202ENST00000380409 NRDCO43847 1150 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 PPFIA3O75145 1194 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 SKAP2O75563 359 aaPredicted RBP7.48□□□□□ -1.21
RIPK1-202ENST00000380409 RASA3Q14644 834 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 MYSM1Q5VVJ2 828 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 C6orf89Q6UWU4 347 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 SRGAP1Q7Z6B7 1085 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 MFN1Q8IWA4 741 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 USHBP1Q8N6Y0 703 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 ZFAND2BQ8WV99 257 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 EZH1Q92800 747 aaPredicted RBP7.48□□□□□ -1.21
RIPK1-202ENST00000380409 SIL1Q9H173 461 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 NLRP2Q9NX02 1062 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 NSD2O96028 1365 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 ARHGEF28Q8N1W1 1705 aaKnown RBP7.48□□□□□ -1.21
RIPK1-202ENST00000380409 EBAG9O00559 213 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 FOXD4Q12950 439 aaPredicted RBP7.48□□□□□ -1.21
RIPK1-202ENST00000380409 KCNB1Q14721 858 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 STX1AQ16623 288 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 ARMC3Q5W041 872 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 IGSF22Q8N9C0 903 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 GPATCH3Q96I76 525 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 CRACR2AQ9BSW2 395 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 HPCAL4Q9UM19 191 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 A2ML1A8K2U0 1454 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 CEP170BQ9Y4F5 1589 aaPredicted RBP7.48□□□□□ -1.21
RIPK1-202ENST00000380409 FAM208AQ9UK61 1670 aaKnown RBP7.48□□□□□ -1.21
RIPK1-202ENST00000380409 A6NHS1 94 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 CDKL5O76039 1030 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 URI1O94763 535 aaPredicted RBP7.48□□□□□ -1.21
RIPK1-202ENST00000380409 VSNL1P62760 191 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 SKOR1P84550 965 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 SF3A1Q15459 793 aaKnown RBP7.48□□□□□ -1.21
RIPK1-202ENST00000380409 DHX58Q96C10 678 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 HOOK2Q96ED9 719 aa7.48□□□□□ -1.21
RIPK1-202ENST00000380409 RANBP17Q9H2T7 1088 aaKnown RBP7.48□□□□□ -1.21
RIPK1-202ENST00000380409 TET3O43151 1660 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 MGRN1O60291 552 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 GCKP35557 465 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 GCLCP48506 637 aaPredicted RBP7.47□□□□□ -1.21
RIPK1-202ENST00000380409 CLNS1AP54105 237 aaKnown RBP7.47□□□□□ -1.21
RIPK1-202ENST00000380409 MCM6Q14566 821 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 EMC10Q5UCC4 262 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 MTHFD1LQ6UB35 978 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 APBB1IPQ7Z5R6 666 aaPredicted RBP7.47□□□□□ -1.21
RIPK1-202ENST00000380409 NEUROD6Q96NK8 337 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 CORO1CQ9ULV4 474 aaPredicted RBP7.47□□□□□ -1.21
RIPK1-202ENST00000380409 CD163L1Q9NR16 1453 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 AGLP35573 1532 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 KRT24Q2M2I5 525 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 DDX46Q7L014 1031 aaKnown RBP7.47□□□□□ -1.21
RIPK1-202ENST00000380409 RBM17Q96I25 401 aaKnown RBP7.47□□□□□ -1.21
RIPK1-202ENST00000380409 SUDS3Q9H7L9 328 aaPredicted RBP7.47□□□□□ -1.21
RIPK1-202ENST00000380409 SUN2Q9UH99 717 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 SH3TC1Q8TE82 1336 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 CASZ1Q86V15 1759 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 ERICH2A1L162 156 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 H3BQV1 296 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 AK2P54819 239 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms