RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 IRF6O14896 467 aa28.84■■■□□ 2.21
U2AF1-202ENST00000380276 UBTFL1P0CB47 393 aaPredicted RBP28.84■■■□□ 2.21
U2AF1-202ENST00000380276 NBPF11Q86T75 865 aa28.84■■■□□ 2.21
U2AF1-202ENST00000380276 SLFN5Q08AF3 891 aa28.83■■■□□ 2.21
U2AF1-202ENST00000380276 PPIL2Q13356 520 aa28.83■■■□□ 2.21
U2AF1-202ENST00000380276 SLC4A8Q2Y0W8 1093 aa28.83■■■□□ 2.21
U2AF1-202ENST00000380276 GCC1Q96CN9 775 aa28.83■■■□□ 2.21
U2AF1-202ENST00000380276 RPAP1Q9BWH6 1393 aaPredicted RBP28.83■■■□□ 2.21
U2AF1-202ENST00000380276 DIXDC1Q155Q3 683 aa28.82■■■□□ 2.2
U2AF1-202ENST00000380276 ATP2B3Q16720 1220 aa28.82■■■□□ 2.2
U2AF1-202ENST00000380276 ALDH1L2Q3SY69 923 aa28.82■■■□□ 2.2
U2AF1-202ENST00000380276 AK9Q5TCS8 1911 aa28.81■■■□□ 2.2
U2AF1-202ENST00000380276 TLR2O60603 784 aa28.81■■■□□ 2.2
U2AF1-202ENST00000380276 INPP5BP32019 993 aa28.81■■■□□ 2.2
U2AF1-202ENST00000380276 FAM151AQ8WW52 585 aa28.81■■■□□ 2.2
U2AF1-202ENST00000380276 ZNF333Q96JL9 665 aa28.81■■■□□ 2.2
U2AF1-202ENST00000380276 GNL3LQ9NVN8 582 aaKnown RBP28.81■■■□□ 2.2
U2AF1-202ENST00000380276 CEP126Q9P2H0 1117 aa28.81■■■□□ 2.2
U2AF1-202ENST00000380276 DAGLAQ9Y4D2 1042 aa28.81■■■□□ 2.2
U2AF1-202ENST00000380276 PRDX5P30044 214 aa28.8■■■□□ 2.2
U2AF1-202ENST00000380276 ATG9AQ7Z3C6 839 aa28.8■■■□□ 2.2
U2AF1-202ENST00000380276 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.8■■■□□ 2.2
U2AF1-202ENST00000380276 CDCA7LQ96GN5 454 aa28.8■■■□□ 2.2
U2AF1-202ENST00000380276 ARHGAP39Q9C0H5 1083 aa28.8■■■□□ 2.2
U2AF1-202ENST00000380276 HTTP42858 3142 aa28.79■■■□□ 2.2
U2AF1-202ENST00000380276 ZSWIM8A7E2V4 1837 aa28.79■■■□□ 2.2
U2AF1-202ENST00000380276 LDHBP07195 334 aaKnown RBP28.79■■■□□ 2.2
U2AF1-202ENST00000380276 PPATQ06203 517 aa28.79■■■□□ 2.2
U2AF1-202ENST00000380276 CDC42EP5Q6NZY7 148 aa28.79■■■□□ 2.2
U2AF1-202ENST00000380276 ZCCHC17Q9NP64 241 aaKnown RBP28.79■■■□□ 2.2
U2AF1-202ENST00000380276 LACTBP83111 547 aaPredicted RBP28.78■■■□□ 2.2
U2AF1-202ENST00000380276 SH3TC2Q8TF17 1288 aa28.78■■■□□ 2.2
U2AF1-202ENST00000380276 USP40Q9NVE5 1235 aa28.78■■■□□ 2.2
U2AF1-202ENST00000380276 NFIAQ12857 509 aa28.76■■■□□ 2.19
U2AF1-202ENST00000380276 CPA4Q9UI42 421 aa28.76■■■□□ 2.19
U2AF1-202ENST00000380276 CIAO1O76071 339 aa28.75■■■□□ 2.19
U2AF1-202ENST00000380276 DENND2AQ9ULE3 1009 aa28.75■■■□□ 2.19
U2AF1-202ENST00000380276 NOB1Q9ULX3 412 aaKnown RBP28.75■■■□□ 2.19
U2AF1-202ENST00000380276 PA2G4Q9UQ80 394 aaKnown RBP28.75■■■□□ 2.19
U2AF1-202ENST00000380276 LRRFIP2Q9Y608 721 aaKnown RBP28.75■■■□□ 2.19
U2AF1-202ENST00000380276 PHKA1P46020 1223 aa28.74■■■□□ 2.19
U2AF1-202ENST00000380276 FBXO3Q9UK99 471 aa28.74■■■□□ 2.19
U2AF1-202ENST00000380276 PDHXO00330 501 aa28.73■■■□□ 2.19
U2AF1-202ENST00000380276 ANKRD23Q86SG2 305 aa28.73■■■□□ 2.19
U2AF1-202ENST00000380276 HDAC5Q9UQL6 1122 aa28.73■■■□□ 2.19
U2AF1-202ENST00000380276 IL15P40933 162 aaPredicted RBP28.72■■■□□ 2.19
U2AF1-202ENST00000380276 API5Q9BZZ5 524 aaKnown RBP28.72■■■□□ 2.19
U2AF1-202ENST00000380276 FAM198AQ9UFP1 575 aa28.72■■■□□ 2.19
U2AF1-202ENST00000380276 CENPFP49454 3210 aa28.71■■■□□ 2.19
U2AF1-202ENST00000380276 DZIP1Q86YF9 867 aaKnown RBP28.71■■■□□ 2.19
U2AF1-202ENST00000380276 ZSCAN29Q8IWY8 852 aaPredicted RBP28.71■■■□□ 2.19
U2AF1-202ENST00000380276 ZNF112Q9UJU3 913 aa28.71■■■□□ 2.19
U2AF1-202ENST00000380276 KIAA0100Q14667 2235 aaKnown RBP28.71■■■□□ 2.19
U2AF1-202ENST00000380276 SEMA3EO15041 775 aa28.7■■■□□ 2.18
U2AF1-202ENST00000380276 FMNL1O95466 1100 aaPredicted RBP28.7■■■□□ 2.18
U2AF1-202ENST00000380276 GNRH1P01148 92 aa28.7■■■□□ 2.18
U2AF1-202ENST00000380276 ADORA1P30542 326 aa28.7■■■□□ 2.18
U2AF1-202ENST00000380276 PSMC4P43686 418 aa28.7■■■□□ 2.18
U2AF1-202ENST00000380276 HABP4Q5JVS0 413 aaKnown RBP28.7■■■□□ 2.18
U2AF1-202ENST00000380276 C17orf99Q6UX52 265 aa28.7■■■□□ 2.18
U2AF1-202ENST00000380276 ABCF2Q9UG63 623 aa28.7■■■□□ 2.18
U2AF1-202ENST00000380276 SALL1Q9NSC2 1324 aa28.69■■■□□ 2.18
U2AF1-202ENST00000380276 PRMT2P55345 433 aa28.69■■■□□ 2.18
U2AF1-202ENST00000380276 ZFPM1Q8IX07 1006 aa28.69■■■□□ 2.18
U2AF1-202ENST00000380276 ZGPATQ8N5A5 531 aaKnown RBP28.69■■■□□ 2.18
U2AF1-202ENST00000380276 KCNH4Q9UQ05 1017 aa28.69■■■□□ 2.18
U2AF1-202ENST00000380276 RGS3P49796 1198 aa28.68■■■□□ 2.18
U2AF1-202ENST00000380276 NOL9Q5SY16 702 aaKnown RBP28.68■■■□□ 2.18
U2AF1-202ENST00000380276 CCDC102BQ68D86 513 aa28.68■■■□□ 2.18
U2AF1-202ENST00000380276 DOCK2Q92608 1830 aa28.67■■■□□ 2.18
U2AF1-202ENST00000380276 HOXD10P28358 340 aa28.67■■■□□ 2.18
U2AF1-202ENST00000380276 RAET1EQ8TD07 263 aa28.67■■■□□ 2.18
U2AF1-202ENST00000380276 MEIS3Q99687 375 aa28.67■■■□□ 2.18
U2AF1-202ENST00000380276 PICK1Q9NRD5 415 aa28.67■■■□□ 2.18
U2AF1-202ENST00000380276 TRIM47Q96LD4 638 aa28.66■■■□□ 2.18
U2AF1-202ENST00000380276 PARK7Q99497 189 aaKnown RBP28.66■■■□□ 2.18
U2AF1-202ENST00000380276 MYH2Q9UKX2 1941 aa28.66■■■□□ 2.18
U2AF1-202ENST00000380276 CT47B1P0C2W7 299 aaPredicted RBP28.65■■■□□ 2.18
U2AF1-202ENST00000380276 OSBPP22059 807 aa28.65■■■□□ 2.18
U2AF1-202ENST00000380276 CTGFP29279 349 aa28.65■■■□□ 2.18
U2AF1-202ENST00000380276 TIMM10P62072 90 aa28.65■■■□□ 2.18
U2AF1-202ENST00000380276 PICALMQ13492 652 aa28.65■■■□□ 2.18
U2AF1-202ENST00000380276 SLF2Q8IX21 1173 aa28.65■■■□□ 2.18
U2AF1-202ENST00000380276 SRRDQ9UH36 339 aa28.65■■■□□ 2.18
U2AF1-202ENST00000380276 MYPNQ86TC9 1320 aa28.65■■■□□ 2.18
U2AF1-202ENST00000380276 RASGRF1Q13972 1273 aa28.64■■■□□ 2.18
U2AF1-202ENST00000380276 GADL1Q6ZQY3 521 aa28.64■■■□□ 2.18
U2AF1-202ENST00000380276 SCYL3Q8IZE3 742 aa28.64■■■□□ 2.18
U2AF1-202ENST00000380276 COPRSQ9NQ92 184 aa28.64■■■□□ 2.18
U2AF1-202ENST00000380276 BIN2Q9UBW5 565 aaPredicted RBP28.64■■■□□ 2.18
U2AF1-202ENST00000380276 MKI67P46013 3256 aaKnown RBP28.63■■■□□ 2.17
U2AF1-202ENST00000380276 ENTPD3O75355 529 aa28.63■■■□□ 2.17
U2AF1-202ENST00000380276 CYP2C8P10632 490 aa28.63■■■□□ 2.17
U2AF1-202ENST00000380276 TRMT2AQ8IZ69 625 aaKnown RBP28.63■■■□□ 2.17
U2AF1-202ENST00000380276 ZHX2Q9Y6X8 837 aa28.63■■■□□ 2.17
U2AF1-202ENST00000380276 CXCL11O14625 94 aa28.62■■■□□ 2.17
U2AF1-202ENST00000380276 BTDP43251 543 aa28.62■■■□□ 2.17
U2AF1-202ENST00000380276 MOGSQ13724 837 aa28.62■■■□□ 2.17
U2AF1-202ENST00000380276 MTFR1Q15390 333 aa28.62■■■□□ 2.17
U2AF1-202ENST00000380276 SPTY2D1Q68D10 685 aaPredicted RBP28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms