RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 CYP19A1P11511 503 aaPredicted RBP16.34■□□□□ 0.21
CLCNKA-202ENST00000375692 AXDND1Q5T1B0 1012 aaPredicted RBP16.34■□□□□ 0.21
CLCNKA-202ENST00000375692 DPF2Q92785 391 aa16.34■□□□□ 0.21
CLCNKA-202ENST00000375692 POLR3EQ9NVU0 708 aa16.34■□□□□ 0.21
CLCNKA-202ENST00000375692 TRPC5Q9UL62 973 aaPredicted RBP16.34■□□□□ 0.21
CLCNKA-202ENST00000375692 A0A1B0GUL7 405 aa16.33■□□□□ 0.21
CLCNKA-202ENST00000375692 PSDA5PKW4 1024 aaPredicted RBP16.33■□□□□ 0.21
CLCNKA-202ENST00000375692 PRC1O43663 620 aa16.33■□□□□ 0.21
CLCNKA-202ENST00000375692 H2AFXP16104 143 aaPredicted RBP16.33■□□□□ 0.21
CLCNKA-202ENST00000375692 WASHC4Q2M389 1173 aa16.33■□□□□ 0.21
CLCNKA-202ENST00000375692 SYNE3Q6ZMZ3 975 aa16.33■□□□□ 0.21
CLCNKA-202ENST00000375692 SEPT12Q8IYM1 358 aa16.33■□□□□ 0.21
CLCNKA-202ENST00000375692 HSD3B7Q9H2F3 369 aa16.33■□□□□ 0.21
CLCNKA-202ENST00000375692 DNAI1Q9UI46 699 aa16.33■□□□□ 0.21
CLCNKA-202ENST00000375692 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.33■□□□□ 0.21
CLCNKA-202ENST00000375692 ERICH4A6NGS2 130 aa16.33■□□□□ 0.2
CLCNKA-202ENST00000375692 YEATS4O95619 227 aa16.33■□□□□ 0.2
CLCNKA-202ENST00000375692 PLBD2Q8NHP8 589 aa16.33■□□□□ 0.2
CLCNKA-202ENST00000375692 AIFM3Q96NN9 605 aa16.33■□□□□ 0.2
CLCNKA-202ENST00000375692 MROH7-TTC4A0A0A0MT08 1334 aa16.33■□□□□ 0.2
CLCNKA-202ENST00000375692 H7C1W4 665 aa16.33■□□□□ 0.2
CLCNKA-202ENST00000375692 CLCN6P51797 869 aa16.33■□□□□ 0.2
CLCNKA-202ENST00000375692 EVCP57679 992 aa16.33■□□□□ 0.2
CLCNKA-202ENST00000375692 ARHGAP29Q52LW3 1261 aa16.33■□□□□ 0.2
CLCNKA-202ENST00000375692 ANO1Q5XXA6 986 aa16.33■□□□□ 0.2
CLCNKA-202ENST00000375692 ZBTB1Q9Y2K1 713 aa16.33■□□□□ 0.2
CLCNKA-202ENST00000375692 AFDNP55196 1824 aaKnown RBP16.32■□□□□ 0.2
CLCNKA-202ENST00000375692 STARD3NLO95772 234 aa16.32■□□□□ 0.2
CLCNKA-202ENST00000375692 FGAP02671 866 aa16.32■□□□□ 0.2
CLCNKA-202ENST00000375692 ATP6V1AP38606 617 aa16.32■□□□□ 0.2
CLCNKA-202ENST00000375692 ITPK1Q13572 414 aa16.32■□□□□ 0.2
CLCNKA-202ENST00000375692 LOC102724428A0A0B4J2F2 783 aa16.32■□□□□ 0.2
CLCNKA-202ENST00000375692 CPLX1O14810 134 aa16.32■□□□□ 0.2
CLCNKA-202ENST00000375692 FANCGO15287 622 aa16.32■□□□□ 0.2
CLCNKA-202ENST00000375692 IL15P40933 162 aaPredicted RBP16.32■□□□□ 0.2
CLCNKA-202ENST00000375692 SIK1P57059 783 aa16.32■□□□□ 0.2
CLCNKA-202ENST00000375692 TPM4P67936 248 aa16.32■□□□□ 0.2
CLCNKA-202ENST00000375692 FHOD1Q9Y613 1164 aa16.32■□□□□ 0.2
CLCNKA-202ENST00000375692 CMA1P23946 247 aa16.31■□□□□ 0.2
CLCNKA-202ENST00000375692 ANTXR2P58335 489 aa16.31■□□□□ 0.2
CLCNKA-202ENST00000375692 KIF23Q02241 960 aaPredicted RBP16.31■□□□□ 0.2
CLCNKA-202ENST00000375692 DENND2AQ9ULE3 1009 aa16.31■□□□□ 0.2
CLCNKA-202ENST00000375692 EYA2O00167 538 aa16.31■□□□□ 0.2
CLCNKA-202ENST00000375692 ADORA1P30542 326 aa16.31■□□□□ 0.2
CLCNKA-202ENST00000375692 ETF1P62495 437 aaKnown RBP16.31■□□□□ 0.2
CLCNKA-202ENST00000375692 TEX13AQ9BXU3 409 aaPredicted RBP16.31■□□□□ 0.2
CLCNKA-202ENST00000375692 ATRNO75882 1429 aa16.3■□□□□ 0.2
CLCNKA-202ENST00000375692 ONECUT3O60422 494 aaPredicted RBP16.3■□□□□ 0.2
CLCNKA-202ENST00000375692 UBASH3AP57075 661 aa16.3■□□□□ 0.2
CLCNKA-202ENST00000375692 PNOCQ13519 176 aa16.3■□□□□ 0.2
CLCNKA-202ENST00000375692 BMS1Q14692 1282 aaKnown RBP16.3■□□□□ 0.2
CLCNKA-202ENST00000375692 IMMTQ16891 758 aaKnown RBP16.3■□□□□ 0.2
CLCNKA-202ENST00000375692 BRAPQ7Z569 592 aa16.3■□□□□ 0.2
CLCNKA-202ENST00000375692 NKX2-3Q8TAU0 364 aa16.3■□□□□ 0.2
CLCNKA-202ENST00000375692 UTP14AQ9BVJ6 771 aaKnown RBP16.3■□□□□ 0.2
CLCNKA-202ENST00000375692 TMEM232C9JQI7 657 aa16.3■□□□□ 0.2
CLCNKA-202ENST00000375692 SERPINC1P01008 464 aa16.3■□□□□ 0.2
CLCNKA-202ENST00000375692 RXRAP19793 462 aa16.3■□□□□ 0.2
CLCNKA-202ENST00000375692 TRIM65Q6PJ69 517 aa16.3■□□□□ 0.2
CLCNKA-202ENST00000375692 SMIM5Q71RC9 77 aa16.3■□□□□ 0.2
CLCNKA-202ENST00000375692 MB21D2Q8IYB1 491 aaPredicted RBP16.3■□□□□ 0.2
CLCNKA-202ENST00000375692 FAM177A1Q8N128 213 aaPredicted RBP16.3■□□□□ 0.2
CLCNKA-202ENST00000375692 GPR108Q9NPR9 543 aa16.3■□□□□ 0.2
CLCNKA-202ENST00000375692 ZBTB22O15209 634 aa16.29■□□□□ 0.2
CLCNKA-202ENST00000375692 DHX16O60231 1041 aaKnown RBP16.29■□□□□ 0.2
CLCNKA-202ENST00000375692 SYKP43405 635 aa16.29■□□□□ 0.2
CLCNKA-202ENST00000375692 SCARF1Q14162 830 aa16.29■□□□□ 0.2
CLCNKA-202ENST00000375692 HSP90AA4PQ58FG1 418 aa16.29■□□□□ 0.2
CLCNKA-202ENST00000375692 FBXL16Q8N461 479 aa16.29■□□□□ 0.2
CLCNKA-202ENST00000375692 CCDC85AQ96PX6 553 aaPredicted RBP16.29■□□□□ 0.2
CLCNKA-202ENST00000375692 PUS7LQ9H0K6 701 aaKnown RBP16.29■□□□□ 0.2
CLCNKA-202ENST00000375692 EPC1Q9H2F5 836 aa16.29■□□□□ 0.2
CLCNKA-202ENST00000375692 NRDCO43847 1150 aa16.29■□□□□ 0.2
CLCNKA-202ENST00000375692 URI1O94763 535 aaPredicted RBP16.29■□□□□ 0.2
CLCNKA-202ENST00000375692 CFAP100Q494V2 611 aa16.29■□□□□ 0.2
CLCNKA-202ENST00000375692 PI16Q6UXB8 463 aa16.29■□□□□ 0.2
CLCNKA-202ENST00000375692 CHMP4CQ96CF2 233 aa16.29■□□□□ 0.2
CLCNKA-202ENST00000375692 CLIC6Q96NY7 704 aa16.29■□□□□ 0.2
CLCNKA-202ENST00000375692 CWC25Q9NXE8 425 aaPredicted RBP16.29■□□□□ 0.2
CLCNKA-202ENST00000375692 TBC1D2BQ9UPU7 963 aa16.29■□□□□ 0.2
CLCNKA-202ENST00000375692 PNMA6AP0CW24 399 aaPredicted RBP16.28■□□□□ 0.2
CLCNKA-202ENST00000375692 SLC39A14Q15043 492 aa16.28■□□□□ 0.2
CLCNKA-202ENST00000375692 SHC4Q6S5L8 630 aa16.28■□□□□ 0.2
CLCNKA-202ENST00000375692 PODXL2Q9NZ53 605 aa16.28■□□□□ 0.2
CLCNKA-202ENST00000375692 LAMB4A4D0S4 1761 aa16.28■□□□□ 0.2
CLCNKA-202ENST00000375692 IKBKBO14920 756 aa16.28■□□□□ 0.2
CLCNKA-202ENST00000375692 PLA2G4AP47712 749 aa16.28■□□□□ 0.2
CLCNKA-202ENST00000375692 KCNJ6P48051 423 aa16.28■□□□□ 0.2
CLCNKA-202ENST00000375692 HLFQ16534 295 aa16.28■□□□□ 0.2
CLCNKA-202ENST00000375692 INTS5Q6P9B9 1019 aaKnown RBP16.28■□□□□ 0.2
CLCNKA-202ENST00000375692 UBXN4Q92575 508 aa16.28■□□□□ 0.2
CLCNKA-202ENST00000375692 NOL10Q9BSC4 688 aaKnown RBP16.28■□□□□ 0.2
CLCNKA-202ENST00000375692 TMX1Q9H3N1 280 aa16.28■□□□□ 0.2
CLCNKA-202ENST00000375692 TAF3Q5VWG9 929 aa16.27■□□□□ 0.2
CLCNKA-202ENST00000375692 REXO1L1PQ8IX06 675 aa16.27■□□□□ 0.2
CLCNKA-202ENST00000375692 CARD6Q9BX69 1037 aa16.27■□□□□ 0.2
CLCNKA-202ENST00000375692 FANCLQ9NW38 375 aa16.27■□□□□ 0.2
CLCNKA-202ENST00000375692 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.27■□□□□ 0.19
CLCNKA-202ENST00000375692 CRKLP46109 303 aaKnown RBP16.27■□□□□ 0.19
CLCNKA-202ENST00000375692 TTC39AQ5SRH9 613 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms