RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 CLIC4Q9Y696 253 aa15.36■□□□□ 0.05
SNX12-202ENST00000374274 RGPD5Q99666 1765 aa15.36■□□□□ 0.05
SNX12-202ENST00000374274 PDIA3P30101 505 aaKnown RBP15.36■□□□□ 0.05
SNX12-202ENST00000374274 MCM6Q14566 821 aa15.36■□□□□ 0.05
SNX12-202ENST00000374274 PLEKHO1Q53GL0 409 aaPredicted RBP15.36■□□□□ 0.05
SNX12-202ENST00000374274 MCTP2Q6DN12 878 aa15.36■□□□□ 0.05
SNX12-202ENST00000374274 CTCFLQ8NI51 663 aaPredicted RBP15.36■□□□□ 0.05
SNX12-202ENST00000374274 MAP3K15Q6ZN16 1313 aa15.36■□□□□ 0.05
SNX12-202ENST00000374274 EIF2S2P20042 333 aaKnown RBP15.35■□□□□ 0.05
SNX12-202ENST00000374274 AARSP49588 968 aaKnown RBP eCLIP15.35■□□□□ 0.05
SNX12-202ENST00000374274 AMOTQ4VCS5 1084 aa15.35■□□□□ 0.05
SNX12-202ENST00000374274 TOGARAM2Q6ZUX3 1019 aa15.35■□□□□ 0.05
SNX12-202ENST00000374274 STOX1Q6ZVD7 989 aa15.35■□□□□ 0.05
SNX12-202ENST00000374274 RPAINQ86UA6 219 aa15.35■□□□□ 0.05
SNX12-202ENST00000374274 FAM177A1Q8N128 213 aaPredicted RBP15.35■□□□□ 0.05
SNX12-202ENST00000374274 LINS1Q8NG48 757 aa15.35■□□□□ 0.05
SNX12-202ENST00000374274 PANX2Q96RD6 677 aa15.35■□□□□ 0.05
SNX12-202ENST00000374274 GRM8O00222 908 aa15.35■□□□□ 0.05
SNX12-202ENST00000374274 CASP8Q14790 479 aa15.35■□□□□ 0.05
SNX12-202ENST00000374274 DNAJC21Q5F1R6 531 aaKnown RBP15.35■□□□□ 0.05
SNX12-202ENST00000374274 AKAP4Q5JQC9 854 aa15.35■□□□□ 0.05
SNX12-202ENST00000374274 ANO1Q5XXA6 986 aa15.35■□□□□ 0.05
SNX12-202ENST00000374274 TADA2BQ86TJ2 420 aa15.35■□□□□ 0.05
SNX12-202ENST00000374274 JMYQ8N9B5 988 aa15.35■□□□□ 0.05
SNX12-202ENST00000374274 INTS13Q9NVM9 706 aa15.35■□□□□ 0.05
SNX12-202ENST00000374274 AXIN2Q9Y2T1 843 aa15.35■□□□□ 0.05
SNX12-202ENST00000374274 PPP6R2O75170 966 aa15.34■□□□□ 0.05
SNX12-202ENST00000374274 FDPSP14324 419 aaKnown RBP15.34■□□□□ 0.05
SNX12-202ENST00000374274 SYKP43405 635 aa15.34■□□□□ 0.05
SNX12-202ENST00000374274 GSCP56915 257 aaPredicted RBP15.34■□□□□ 0.05
SNX12-202ENST00000374274 WHAMMP3Q1A5X7 153 aa15.34■□□□□ 0.05
SNX12-202ENST00000374274 WDR93Q6P2C0 686 aa15.34■□□□□ 0.05
SNX12-202ENST00000374274 ZNF530Q6P9A1 599 aaPredicted RBP15.34■□□□□ 0.05
SNX12-202ENST00000374274 SYNE3Q6ZMZ3 975 aa15.34■□□□□ 0.05
SNX12-202ENST00000374274 MAP3K2Q9Y2U5 619 aa15.34■□□□□ 0.05
SNX12-202ENST00000374274 TMEM232C9JQI7 657 aa15.34■□□□□ 0.05
SNX12-202ENST00000374274 KIF5CO60282 957 aa15.34■□□□□ 0.05
SNX12-202ENST00000374274 WDHD1O75717 1129 aaPredicted RBP15.34■□□□□ 0.05
SNX12-202ENST00000374274 PIP4K2BP78356 416 aa15.34■□□□□ 0.05
SNX12-202ENST00000374274 SLC39A14Q15043 492 aa15.34■□□□□ 0.05
SNX12-202ENST00000374274 CNNM3Q8NE01 707 aa15.34■□□□□ 0.05
SNX12-202ENST00000374274 ABCB6Q9NP58 842 aa15.34■□□□□ 0.05
SNX12-202ENST00000374274 KCNA4P22459 653 aa15.33■□□□□ 0.04
SNX12-202ENST00000374274 MCM3P25205 808 aa15.33■□□□□ 0.04
SNX12-202ENST00000374274 PALLDQ8WX93 1383 aa15.33■□□□□ 0.04
SNX12-202ENST00000374274 DDX17Q92841 729 aaKnown RBP15.33■□□□□ 0.04
SNX12-202ENST00000374274 C8orf76Q96K31 380 aa15.33■□□□□ 0.04
SNX12-202ENST00000374274 PNKPQ96T60 521 aa15.33■□□□□ 0.04
SNX12-202ENST00000374274 HELLSQ9NRZ9 838 aa15.33■□□□□ 0.04
SNX12-202ENST00000374274 PSEN1P49768 467 aa15.33■□□□□ 0.04
SNX12-202ENST00000374274 FOSBP53539 338 aa15.33■□□□□ 0.04
SNX12-202ENST00000374274 ZC3H6P61129 1189 aaKnown RBP15.33■□□□□ 0.04
SNX12-202ENST00000374274 KAZALD1Q96I82 304 aa15.33■□□□□ 0.04
SNX12-202ENST00000374274 SUCLG2Q96I99 432 aa15.33■□□□□ 0.04
SNX12-202ENST00000374274 LGR6Q9HBX8 967 aa15.33■□□□□ 0.04
SNX12-202ENST00000374274 FANCLQ9NW38 375 aa15.33■□□□□ 0.04
SNX12-202ENST00000374274 MYO1AQ9UBC5 1043 aa15.33■□□□□ 0.04
SNX12-202ENST00000374274 DACH1Q9UI36 760 aa15.33■□□□□ 0.04
SNX12-202ENST00000374274 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.33■□□□□ 0.04
SNX12-202ENST00000374274 XIRP1Q702N8 1843 aaKnown RBP15.32■□□□□ 0.04
SNX12-202ENST00000374274 ZNF18P17022 549 aa15.32■□□□□ 0.04
SNX12-202ENST00000374274 USP8P40818 1118 aa15.32■□□□□ 0.04
SNX12-202ENST00000374274 CCT2P78371 535 aaKnown RBP15.32■□□□□ 0.04
SNX12-202ENST00000374274 FOXR1Q6PIV2 292 aa15.32■□□□□ 0.04
SNX12-202ENST00000374274 HAUS7Q99871 368 aa15.32■□□□□ 0.04
SNX12-202ENST00000374274 LRRC2Q9BYS8 371 aa15.32■□□□□ 0.04
SNX12-202ENST00000374274 BICC1Q9H694 974 aaKnown RBP15.32■□□□□ 0.04
SNX12-202ENST00000374274 OVOS2A0A0G2JMS6 1433 aa15.32■□□□□ 0.04
SNX12-202ENST00000374274 MROH7-TTC4A0A0A0MT08 1334 aa15.32■□□□□ 0.04
SNX12-202ENST00000374274 LOC102724159A0A0B4J2E5 919 aa15.32■□□□□ 0.04
SNX12-202ENST00000374274 GUCY1B3Q02153 619 aa15.32■□□□□ 0.04
SNX12-202ENST00000374274 PWP2Q15269 919 aaKnown RBP15.32■□□□□ 0.04
SNX12-202ENST00000374274 C1orf141Q5JVX7 400 aa15.32■□□□□ 0.04
SNX12-202ENST00000374274 DRC1Q96MC2 740 aa15.32■□□□□ 0.04
SNX12-202ENST00000374274 SEC62Q99442 399 aaKnown RBP15.32■□□□□ 0.04
SNX12-202ENST00000374274 HOOK1Q9UJC3 728 aaKnown RBP15.32■□□□□ 0.04
SNX12-202ENST00000374274 ENOX1Q8TC92 643 aaKnown RBP15.31■□□□□ 0.04
SNX12-202ENST00000374274 AFAP1L1Q8TED9 768 aa15.31■□□□□ 0.04
SNX12-202ENST00000374274 CCDC102AQ96A19 550 aa15.31■□□□□ 0.04
SNX12-202ENST00000374274 TNS3Q68CZ2 1445 aa15.31■□□□□ 0.04
SNX12-202ENST00000374274 CTAGE9A4FU28 777 aa15.31■□□□□ 0.04
SNX12-202ENST00000374274 CLGNO14967 610 aa15.31■□□□□ 0.04
SNX12-202ENST00000374274 SHOX2O60902 331 aaPredicted RBP15.31■□□□□ 0.04
SNX12-202ENST00000374274 N4BP1O75113 896 aaKnown RBP15.31■□□□□ 0.04
SNX12-202ENST00000374274 TEFQ10587 303 aa15.31■□□□□ 0.04
SNX12-202ENST00000374274 SF3B2Q13435 895 aaKnown RBP15.31■□□□□ 0.04
SNX12-202ENST00000374274 ZBTB9Q96C00 473 aa15.31■□□□□ 0.04
SNX12-202ENST00000374274 TACO1Q9BSH4 297 aaKnown RBP15.31■□□□□ 0.04
SNX12-202ENST00000374274 FAM204AQ9H8W3 233 aa15.31■□□□□ 0.04
SNX12-202ENST00000374274 MRPL44Q9H9J2 332 aaKnown RBP15.31■□□□□ 0.04
SNX12-202ENST00000374274 NCOA5Q9HCD5 579 aaKnown RBP15.31■□□□□ 0.04
SNX12-202ENST00000374274 COPRSQ9NQ92 184 aa15.31■□□□□ 0.04
SNX12-202ENST00000374274 ADGRG1Q9Y653 693 aa15.31■□□□□ 0.04
SNX12-202ENST00000374274 STRCQ7RTU9 1775 aa15.31■□□□□ 0.04
SNX12-202ENST00000374274 PXDNQ92626 1479 aa15.3■□□□□ 0.04
SNX12-202ENST00000374274 LMTK3Q96Q04 1460 aa15.3■□□□□ 0.04
SNX12-202ENST00000374274 CTAGE15A4D2H0 777 aa15.3■□□□□ 0.04
SNX12-202ENST00000374274 CTAGE8P0CG41 777 aa15.3■□□□□ 0.04
SNX12-202ENST00000374274 MAP9Q49MG5 647 aa15.3■□□□□ 0.04
SNX12-202ENST00000374274 CT47A1Q5JQC4 288 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms