RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 IARSP41252 1262 aaKnown RBP12.57□□□□□ -0.4
LRIF1-201ENST00000369763 FOXP4Q8IVH2 680 aaPredicted RBP12.57□□□□□ -0.4
LRIF1-201ENST00000369763 ZNF397Q8NF99 534 aaPredicted RBP12.57□□□□□ -0.4
LRIF1-201ENST00000369763 DESI2Q9BSY9 194 aa12.57□□□□□ -0.4
LRIF1-201ENST00000369763 AKAP2Q9Y2D5 859 aa12.57□□□□□ -0.4
LRIF1-201ENST00000369763 PCDHA5Q9Y5H7 936 aa12.57□□□□□ -0.4
LRIF1-201ENST00000369763 A0A1W2PQ27 194 aa12.57□□□□□ -0.4
LRIF1-201ENST00000369763 A0A1W2PQ64 194 aa12.57□□□□□ -0.4
LRIF1-201ENST00000369763 A0A1W2PQD8 194 aa12.57□□□□□ -0.4
LRIF1-201ENST00000369763 SMIM22K7EJ46 135 aa12.57□□□□□ -0.4
LRIF1-201ENST00000369763 POLR3GO15318 223 aaPredicted RBP12.57□□□□□ -0.4
LRIF1-201ENST00000369763 YEATS4O95619 227 aa12.57□□□□□ -0.4
LRIF1-201ENST00000369763 PDE4BQ07343 736 aa12.57□□□□□ -0.4
LRIF1-201ENST00000369763 GTPBP4Q9BZE4 634 aaKnown RBP12.57□□□□□ -0.4
LRIF1-201ENST00000369763 ARMT1Q9H993 441 aa12.57□□□□□ -0.4
LRIF1-201ENST00000369763 ZBTB43O43298 467 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 NRDCO43847 1150 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 TOP1P11387 765 aaKnown RBP12.56□□□□□ -0.4
LRIF1-201ENST00000369763 NR5A1Q13285 461 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 TCIRG1Q13488 830 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 APOA5Q6Q788 366 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 KIF6Q6ZMV9 814 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 TRMT112Q9UI30 125 aaKnown RBP12.56□□□□□ -0.4
LRIF1-201ENST00000369763 C1orf167Q5SNV9 1468 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 RANBP6O60518 1105 aaKnown RBP12.56□□□□□ -0.4
LRIF1-201ENST00000369763 SEC31AO94979 1220 aaKnown RBP12.56□□□□□ -0.4
LRIF1-201ENST00000369763 CMA1P23946 247 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 STX17P56962 302 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 SLC39A14Q15043 492 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 ERO1AQ96HE7 468 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 ZNF446Q9NWS9 450 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 FER1L4A9Z1Z3 1794 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 KARSQ15046 597 aaKnown RBP12.56□□□□□ -0.4
LRIF1-201ENST00000369763 SLC4A8Q2Y0W8 1093 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 OLFM4Q6UX06 510 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 BRAPQ7Z569 592 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 MAGEB6Q8N7X4 407 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 MNS1Q8NEH6 495 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 STAMQ92783 540 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 CARD6Q9BX69 1037 aa12.56□□□□□ -0.4
LRIF1-201ENST00000369763 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.56□□□□□ -0.41e-9■□□□□ 9.9
LRIF1-201ENST00000369763 POLR2DO15514 142 aaKnown RBP12.55□□□□□ -0.4
LRIF1-201ENST00000369763 LRRFIP1Q32MZ4 808 aaKnown RBP12.55□□□□□ -0.4
LRIF1-201ENST00000369763 ATL3Q6DD88 541 aa12.55□□□□□ -0.4
LRIF1-201ENST00000369763 USP49Q70CQ1 688 aa12.55□□□□□ -0.4
LRIF1-201ENST00000369763 KRT222Q8N1A0 295 aa12.55□□□□□ -0.4
LRIF1-201ENST00000369763 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.55□□□□□ -0.46e-7■■■■□ 20.8
LRIF1-201ENST00000369763 TMOD3Q9NYL9 352 aa12.55□□□□□ -0.4
LRIF1-201ENST00000369763 KCNH3Q9ULD8 1083 aa12.55□□□□□ -0.4
LRIF1-201ENST00000369763 MBD4O95243 580 aa12.55□□□□□ -0.4
LRIF1-201ENST00000369763 UTP14CQ5TAP6 766 aaKnown RBP12.55□□□□□ -0.4
LRIF1-201ENST00000369763 CPLX2Q6PUV4 134 aaKnown RBP12.55□□□□□ -0.4
LRIF1-201ENST00000369763 METTL16Q86W50 562 aaKnown RBP12.55□□□□□ -0.4
LRIF1-201ENST00000369763 IRX2Q9BZI1 471 aaPredicted RBP12.55□□□□□ -0.4
LRIF1-201ENST00000369763 OSBPL5Q9H0X9 879 aaPredicted RBP12.55□□□□□ -0.4
LRIF1-201ENST00000369763 HSD3B7Q9H2F3 369 aa12.55□□□□□ -0.4
LRIF1-201ENST00000369763 SLC12A7Q9Y666 1083 aa12.55□□□□□ -0.4
LRIF1-201ENST00000369763 ZBTB22O15209 634 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 PRR29P0C7W0 189 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 HSPA2P54652 639 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 MYL5Q02045 173 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 MAPK8IP2Q13387 824 aaPredicted RBP12.54□□□□□ -0.4
LRIF1-201ENST00000369763 CCDC150Q8NCX0 1101 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 NAPBQ9H115 298 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 GPR108Q9NPR9 543 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 ZSWIM5Q9P217 1185 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 TMEM94Q12767 1356 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 AFMP43652 599 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 OVOS2A0A0G2JMS6 1433 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 MINDY4BA8MYZ0 360 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 FANCGO15287 622 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 ZFYP08048 801 aaPredicted RBP12.54□□□□□ -0.4
LRIF1-201ENST00000369763 PDE6AP16499 860 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 CLCN6P51797 869 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 GNG11P61952 73 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 CCDC102BQ68D86 513 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 UBXN4Q92575 508 aa12.54□□□□□ -0.4
LRIF1-201ENST00000369763 RFX7Q2KHR2 1363 aa12.53□□□□□ -0.4
LRIF1-201ENST00000369763 IRS4O14654 1257 aaPredicted RBP12.53□□□□□ -0.4
LRIF1-201ENST00000369763 BMP6P22004 513 aa12.53□□□□□ -0.4
LRIF1-201ENST00000369763 ADD2P35612 726 aa12.53□□□□□ -0.4
LRIF1-201ENST00000369763 SMYD4Q8IYR2 804 aaPredicted RBP12.53□□□□□ -0.4
LRIF1-201ENST00000369763 CCDC34Q96HJ3 373 aa12.53□□□□□ -0.4
LRIF1-201ENST00000369763 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.53□□□□□ -0.43e-7■□□□□ 11
LRIF1-201ENST00000369763 UBN2Q6ZU65 1347 aa12.53□□□□□ -0.4
LRIF1-201ENST00000369763 FAM205CA6NFA0 338 aa12.53□□□□□ -0.4
LRIF1-201ENST00000369763 SH2B2O14492 632 aaPredicted RBP12.53□□□□□ -0.4
LRIF1-201ENST00000369763 TDO2P48775 406 aa12.53□□□□□ -0.4
LRIF1-201ENST00000369763 TEX35Q5T0J7 233 aa12.53□□□□□ -0.4
LRIF1-201ENST00000369763 MRC1P22897 1456 aa12.53□□□□□ -0.4
LRIF1-201ENST00000369763 CIAO1O76071 339 aa12.53□□□□□ -0.4
LRIF1-201ENST00000369763 FMR1Q06787 632 aaKnown RBP eCLIP12.53□□□□□ -0.4
LRIF1-201ENST00000369763 DIS3L2Q8IYB7 885 aaKnown RBP12.53□□□□□ -0.4
LRIF1-201ENST00000369763 TTLL11Q8NHH1 800 aa12.53□□□□□ -0.4
LRIF1-201ENST00000369763 OXER1Q8TDS5 423 aa12.53□□□□□ -0.4
LRIF1-201ENST00000369763 SERTAD1Q9UHV2 236 aa12.53□□□□□ -0.4
LRIF1-201ENST00000369763 NFE2L3Q9Y4A8 694 aa12.53□□□□□ -0.4
LRIF1-201ENST00000369763 ZMYM6O95789 1325 aa12.52□□□□□ -0.4
LRIF1-201ENST00000369763 PCDH11XQ9BZA7 1347 aa12.52□□□□□ -0.4
LRIF1-201ENST00000369763 PCDH11YQ9BZA8 1340 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms