RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 PCDHAC2Q9Y5I4 1007 aa10.73□□□□□ -0.69
SNX27-201ENST00000368838 ARAP2Q8WZ64 1704 aa10.73□□□□□ -0.69
SNX27-201ENST00000368838 AK9Q5TCS8 1911 aa10.72□□□□□ -0.69
SNX27-201ENST00000368838 F8W031 263 aaPredicted RBP10.72□□□□□ -0.69
SNX27-201ENST00000368838 WNT10BO00744 389 aa10.72□□□□□ -0.69
SNX27-201ENST00000368838 IL15P40933 162 aaPredicted RBP10.72□□□□□ -0.69
SNX27-201ENST00000368838 G3BP1Q13283 466 aaKnown RBP eCLIP10.72□□□□□ -0.69
SNX27-201ENST00000368838 TTLL5Q6EMB2 1281 aa10.72□□□□□ -0.69
SNX27-201ENST00000368838 COA1Q9GZY4 146 aa10.72□□□□□ -0.69
SNX27-201ENST00000368838 LEMD3Q9Y2U8 911 aa10.72□□□□□ -0.69
SNX27-201ENST00000368838 TNRC18O15417 2968 aaPredicted RBP10.72□□□□□ -0.69
SNX27-201ENST00000368838 PDE4DIPQ5VU43 2346 aa10.72□□□□□ -0.69
SNX27-201ENST00000368838 ANKRD18BA2A2Z9 1011 aa10.71□□□□□ -0.69
SNX27-201ENST00000368838 MX1P20591 662 aa10.71□□□□□ -0.69
SNX27-201ENST00000368838 STRIP1Q5VSL9 837 aa10.71□□□□□ -0.69
SNX27-201ENST00000368838 LMBR1LQ6UX01 489 aa10.71□□□□□ -0.69
SNX27-201ENST00000368838 OGFOD1Q8N543 542 aa10.71□□□□□ -0.69
SNX27-201ENST00000368838 ANKRD2Q9GZV1 360 aa10.71□□□□□ -0.69
SNX27-201ENST00000368838 PITPNM2Q9BZ72 1349 aa10.7□□□□□ -0.7
SNX27-201ENST00000368838 EYA2O00167 538 aa10.7□□□□□ -0.7
SNX27-201ENST00000368838 ZMYND10O75800 440 aa10.7□□□□□ -0.7
SNX27-201ENST00000368838 CERS5Q8N5B7 392 aa10.7□□□□□ -0.7
SNX27-201ENST00000368838 MS4A4AQ96JQ5 239 aa10.7□□□□□ -0.7
SNX27-201ENST00000368838 CD209Q9NNX6 404 aa10.7□□□□□ -0.7
SNX27-201ENST00000368838 MYO3BQ8WXR4 1341 aa10.69□□□□□ -0.7
SNX27-201ENST00000368838 LAMB1P07942 1786 aa10.69□□□□□ -0.7
SNX27-201ENST00000368838 ERC2O15083 957 aa10.69□□□□□ -0.7
SNX27-201ENST00000368838 GLRX3O76003 335 aaKnown RBP10.69□□□□□ -0.7
SNX27-201ENST00000368838 TBC1D8O95759 1140 aa10.69□□□□□ -0.7
SNX27-201ENST00000368838 PRKAR2AP13861 404 aaKnown RBP10.69□□□□□ -0.7
SNX27-201ENST00000368838 GSPT1P15170 499 aaKnown RBP10.69□□□□□ -0.7
SNX27-201ENST00000368838 SOX10P56693 466 aa10.69□□□□□ -0.7
SNX27-201ENST00000368838 IFIT5Q13325 482 aaKnown RBP10.69□□□□□ -0.7
SNX27-201ENST00000368838 ATG9AQ7Z3C6 839 aa10.69□□□□□ -0.7
SNX27-201ENST00000368838 SKAP1Q86WV1 359 aa10.69□□□□□ -0.7
SNX27-201ENST00000368838 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.69□□□□□ -0.7
SNX27-201ENST00000368838 LARP6Q9BRS8 491 aaKnown RBP10.69□□□□□ -0.7
SNX27-201ENST00000368838 IRS2Q9Y4H2 1338 aa10.69□□□□□ -0.7
SNX27-201ENST00000368838 CLRN2A0PK11 232 aa10.68□□□□□ -0.7
SNX27-201ENST00000368838 CDC45O75419 566 aa10.68□□□□□ -0.7
SNX27-201ENST00000368838 MLLT1Q03111 559 aaPredicted RBP10.68□□□□□ -0.7
SNX27-201ENST00000368838 CCDC57Q2TAC2 916 aa10.68□□□□□ -0.7
SNX27-201ENST00000368838 TAF7LQ5H9L4 462 aa10.68□□□□□ -0.7
SNX27-201ENST00000368838 PI4K2BQ8TCG2 481 aa10.68□□□□□ -0.7
SNX27-201ENST00000368838 KIF12Q96FN5 646 aa10.68□□□□□ -0.7
SNX27-201ENST00000368838 GPATCH3Q96I76 525 aa10.68□□□□□ -0.7
SNX27-201ENST00000368838 ZNF512BQ96KM6 892 aaPredicted RBP10.68□□□□□ -0.7
SNX27-201ENST00000368838 CNNM1Q9NRU3 951 aa10.68□□□□□ -0.7
SNX27-201ENST00000368838 ECHDC1Q9NTX5 307 aa10.68□□□□□ -0.7
SNX27-201ENST00000368838 SAGE1Q9NXZ1 904 aa10.68□□□□□ -0.7
SNX27-201ENST00000368838 HDAC9Q9UKV0 1011 aa10.68□□□□□ -0.7
SNX27-201ENST00000368838 RFX7Q2KHR2 1363 aa10.68□□□□□ -0.7
SNX27-201ENST00000368838 FKBP1BP68106 108 aa10.67□□□□□ -0.7
SNX27-201ENST00000368838 DLGAP5Q15398 846 aa10.67□□□□□ -0.7
SNX27-201ENST00000368838 LDHAL6AQ6ZMR3 332 aa10.67□□□□□ -0.7
SNX27-201ENST00000368838 EAF2Q96CJ1 260 aaPredicted RBP10.67□□□□□ -0.7
SNX27-201ENST00000368838 PUS3Q9BZE2 481 aaKnown RBP10.67□□□□□ -0.7
SNX27-201ENST00000368838 ANGEL1Q9UNK9 670 aaKnown RBP10.67□□□□□ -0.7
SNX27-201ENST00000368838 AKAP2Q9Y2D5 859 aa10.67□□□□□ -0.7
SNX27-201ENST00000368838 RIPOR2Q9Y4F9 1068 aa10.67□□□□□ -0.7
SNX27-201ENST00000368838 SSC5DA1L4H1 1573 aa10.66□□□□□ -0.7
SNX27-201ENST00000368838 IGSF3O75054 1194 aa10.66□□□□□ -0.7
SNX27-201ENST00000368838 ATP5JP18859 108 aa10.66□□□□□ -0.7
SNX27-201ENST00000368838 SDSP20132 328 aa10.66□□□□□ -0.7
SNX27-201ENST00000368838 NF2P35240 595 aa10.66□□□□□ -0.7
SNX27-201ENST00000368838 GYG1P46976 350 aa10.66□□□□□ -0.7
SNX27-201ENST00000368838 RBM25P49756 843 aaKnown RBP10.66□□□□□ -0.7
SNX27-201ENST00000368838 RBM5P52756 815 aaKnown RBP eCLIP10.66□□□□□ -0.7
SNX27-201ENST00000368838 OS9Q13438 667 aaPredicted RBP10.66□□□□□ -0.7
SNX27-201ENST00000368838 CFAP100Q494V2 611 aa10.66□□□□□ -0.7
SNX27-201ENST00000368838 TNNI3KQ59H18 835 aa10.66□□□□□ -0.7
SNX27-201ENST00000368838 APOBEC3FQ8IUX4 373 aaKnown RBP10.66□□□□□ -0.7
SNX27-201ENST00000368838 OTUD7AQ8TE49 926 aaPredicted RBP10.66□□□□□ -0.7
SNX27-201ENST00000368838 IL17RAQ96F46 866 aa10.66□□□□□ -0.7
SNX27-201ENST00000368838 ZBED3Q96IU2 234 aaPredicted RBP10.66□□□□□ -0.7
SNX27-201ENST00000368838 PRMT6Q96LA8 375 aaPredicted RBP10.66□□□□□ -0.7
SNX27-201ENST00000368838 R3HDMLQ9H3Y0 253 aa10.66□□□□□ -0.7
SNX27-201ENST00000368838 UPF2Q9HAU5 1272 aaKnown RBP10.66□□□□□ -0.7
SNX27-201ENST00000368838 VEZTQ9HBM0 779 aa10.66□□□□□ -0.7
SNX27-201ENST00000368838 IQSEC3Q9UPP2 1182 aaPredicted RBP10.66□□□□□ -0.7
SNX27-201ENST00000368838 PA2G4Q9UQ80 394 aaKnown RBP10.66□□□□□ -0.7
SNX27-201ENST00000368838 FPGT-TNNI3KV9GXZ4 949 aa10.66□□□□□ -0.7
SNX27-201ENST00000368838 SMARCA5O60264 1052 aaPredicted RBP10.65□□□□□ -0.7
SNX27-201ENST00000368838 MFSD10Q14728 455 aa10.65□□□□□ -0.7
SNX27-201ENST00000368838 CASC1Q6TDU7 716 aa10.65□□□□□ -0.7
SNX27-201ENST00000368838 ARMC9Q7Z3E5 817 aa10.65□□□□□ -0.7
SNX27-201ENST00000368838 ZNF804AQ7Z570 1209 aa10.65□□□□□ -0.7
SNX27-201ENST00000368838 CLMNQ96JQ2 1002 aa10.65□□□□□ -0.7
SNX27-201ENST00000368838 DEFB129Q9H1M3 183 aa10.65□□□□□ -0.7
SNX27-201ENST00000368838 SNRKQ9NRH2 765 aa10.65□□□□□ -0.7
SNX27-201ENST00000368838 ZSWIM8A7E2V4 1837 aa10.65□□□□□ -0.7
SNX27-201ENST00000368838 MROH5Q6ZUA9 1318 aa10.65□□□□□ -0.7
SNX27-201ENST00000368838 IFIT2P09913 472 aaKnown RBP10.64□□□□□ -0.71
SNX27-201ENST00000368838 RGS19P49795 217 aa10.64□□□□□ -0.71
SNX27-201ENST00000368838 CTU1Q7Z7A3 348 aaKnown RBP10.64□□□□□ -0.71
SNX27-201ENST00000368838 VGLL2Q8N8G2 317 aa10.64□□□□□ -0.71
SNX27-201ENST00000368838 KLHDC4Q8TBB5 520 aa10.64□□□□□ -0.71
SNX27-201ENST00000368838 ZNF296Q8WUU4 475 aaPredicted RBP10.64□□□□□ -0.71
SNX27-201ENST00000368838 TBC1D32Q96NH3 1257 aa10.64□□□□□ -0.71
SNX27-201ENST00000368838 CRISPLD2Q9H0B8 497 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms