RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 UBE2Q2LH0YL09 131 aa11.4□□□□□ -0.58
MRPL55-216ENST00000366744 LDHCP07864 332 aa11.4□□□□□ -0.58
MRPL55-216ENST00000366744 IFIT2P09913 472 aaKnown RBP11.4□□□□□ -0.58
MRPL55-216ENST00000366744 DCAF15Q66K64 600 aa11.4□□□□□ -0.58
MRPL55-216ENST00000366744 FAM83AQ86UY5 434 aa11.4□□□□□ -0.58
MRPL55-216ENST00000366744 RASAL3Q86YV0 1011 aa11.4□□□□□ -0.58
MRPL55-216ENST00000366744 DBNDD2Q9BQY9 259 aa11.4□□□□□ -0.58
MRPL55-216ENST00000366744 BCL11AQ9H165 835 aa11.4□□□□□ -0.58
MRPL55-216ENST00000366744 WBP1LQ9NX94 342 aa11.4□□□□□ -0.58
MRPL55-216ENST00000366744 HMG20BQ9P0W2 317 aa11.4□□□□□ -0.58
MRPL55-216ENST00000366744 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-216ENST00000366744 CSADQ9Y600 493 aa11.4□□□□□ -0.58
MRPL55-216ENST00000366744 MYH1P12882 1939 aa11.4□□□□□ -0.58
MRPL55-216ENST00000366744 CASP8AP2Q9UKL3 1982 aa11.39□□□□□ -0.59
MRPL55-216ENST00000366744 MROH7-TTC4A0A0A0MT08 1334 aa11.39□□□□□ -0.59
MRPL55-216ENST00000366744 UNCXA6NJT0 531 aa11.39□□□□□ -0.59
MRPL55-216ENST00000366744 FOXN1O15353 648 aa11.39□□□□□ -0.59
MRPL55-216ENST00000366744 RAB11FIP3O75154 756 aa11.39□□□□□ -0.59
MRPL55-216ENST00000366744 MCAMP43121 646 aa11.39□□□□□ -0.59
MRPL55-216ENST00000366744 CACNB3P54284 484 aa11.39□□□□□ -0.59
MRPL55-216ENST00000366744 SREBF2Q12772 1141 aa11.39□□□□□ -0.59
MRPL55-216ENST00000366744 C20orf194Q5TEA3 1177 aa11.39□□□□□ -0.59
MRPL55-216ENST00000366744 MOB2Q70IA6 237 aa11.39□□□□□ -0.59
MRPL55-216ENST00000366744 ANKRD13AQ8IZ07 590 aa11.39□□□□□ -0.59
MRPL55-216ENST00000366744 RHPN1Q8TCX5 695 aa11.39□□□□□ -0.59
MRPL55-216ENST00000366744 TMEM39BQ9GZU3 492 aa11.39□□□□□ -0.59
MRPL55-216ENST00000366744 DBNLQ9UJU6 430 aaKnown RBP11.39□□□□□ -0.59
MRPL55-216ENST00000366744 GAKO14976 1311 aa11.38□□□□□ -0.59
MRPL55-216ENST00000366744 AOX1Q06278 1338 aa11.38□□□□□ -0.59
MRPL55-216ENST00000366744 FAM155AB1AL88 458 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-216ENST00000366744 BTDP43251 543 aa11.38□□□□□ -0.59
MRPL55-216ENST00000366744 MECOMQ03112 1051 aa11.38□□□□□ -0.59
MRPL55-216ENST00000366744 NBPF12Q5TAG4 269 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-216ENST00000366744 APOBEC3HQ6NTF7 200 aaKnown RBP11.38□□□□□ -0.59
MRPL55-216ENST00000366744 PI16Q6UXB8 463 aa11.38□□□□□ -0.59
MRPL55-216ENST00000366744 ZSCAN29Q8IWY8 852 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-216ENST00000366744 ZNF512BQ96KM6 892 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-216ENST00000366744 CCDC8Q9H0W5 538 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-216ENST00000366744 IL1RAPL2Q9NP60 686 aa11.38□□□□□ -0.59
MRPL55-216ENST00000366744 USP40Q9NVE5 1235 aa11.38□□□□□ -0.59
MRPL55-216ENST00000366744 ZBTB47Q9UFB7 747 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-216ENST00000366744 IGSF3O75054 1194 aa11.37□□□□□ -0.59
MRPL55-216ENST00000366744 BAG3O95817 575 aa11.37□□□□□ -0.59
MRPL55-216ENST00000366744 ZBTB48P10074 688 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-216ENST00000366744 KIF23Q02241 960 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-216ENST00000366744 MAP3K11Q16584 847 aa11.37□□□□□ -0.59
MRPL55-216ENST00000366744 NAA16Q6N069 864 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-216ENST00000366744 CDC42EP5Q6NZY7 148 aa11.37□□□□□ -0.59
MRPL55-216ENST00000366744 FAM151AQ8WW52 585 aa11.37□□□□□ -0.59
MRPL55-216ENST00000366744 SLC10A4Q96EP9 437 aa11.37□□□□□ -0.59
MRPL55-216ENST00000366744 GPATCH3Q96I76 525 aa11.37□□□□□ -0.59
MRPL55-216ENST00000366744 LRRCC1Q9C099 1032 aa11.37□□□□□ -0.59
MRPL55-216ENST00000366744 SNRKQ9NRH2 765 aa11.37□□□□□ -0.59
MRPL55-216ENST00000366744 SAGE1Q9NXZ1 904 aa11.37□□□□□ -0.59
MRPL55-216ENST00000366744 TLR7Q9NYK1 1049 aaKnown RBP11.37□□□□□ -0.59
MRPL55-216ENST00000366744 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-216ENST00000366744 IDH1O75874 414 aaKnown RBP11.36□□□□□ -0.59
MRPL55-216ENST00000366744 MAP4K4O95819 1239 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-216ENST00000366744 PLCG2P16885 1265 aa11.36□□□□□ -0.59
MRPL55-216ENST00000366744 LBX1P52954 281 aa11.36□□□□□ -0.59
MRPL55-216ENST00000366744 TCP10Q12799 353 aa11.36□□□□□ -0.59
MRPL55-216ENST00000366744 MKRN3Q13064 507 aaKnown RBP11.36□□□□□ -0.59
MRPL55-216ENST00000366744 PICALMQ13492 652 aa11.36□□□□□ -0.59
MRPL55-216ENST00000366744 TTF1Q15361 905 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-216ENST00000366744 TBC1D9Q6ZT07 1266 aa11.36□□□□□ -0.59
MRPL55-216ENST00000366744 EAF2Q96CJ1 260 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-216ENST00000366744 WRNIP1Q96S55 665 aa11.36□□□□□ -0.59
MRPL55-216ENST00000366744 ZNF341Q9BYN7 854 aa11.36□□□□□ -0.59
MRPL55-216ENST00000366744 PRDM10Q9NQV6 1147 aa11.36□□□□□ -0.59
MRPL55-216ENST00000366744 MANSC4A6NHS7 340 aaPredicted RBP11.35□□□□□ -0.59
MRPL55-216ENST00000366744 ENTPD3O75355 529 aa11.35□□□□□ -0.59
MRPL55-216ENST00000366744 HSPA8P11142 646 aaKnown RBP11.35□□□□□ -0.59
MRPL55-216ENST00000366744 RGS3P49796 1198 aa11.35□□□□□ -0.59
MRPL55-216ENST00000366744 MAP3K12Q12852 859 aa11.35□□□□□ -0.59
MRPL55-216ENST00000366744 LDLRAD1Q5T700 205 aa11.35□□□□□ -0.59
MRPL55-216ENST00000366744 TMED8Q6PL24 325 aaPredicted RBP11.35□□□□□ -0.59
MRPL55-216ENST00000366744 CERS3Q8IU89 383 aa11.35□□□□□ -0.59
MRPL55-216ENST00000366744 TNS4Q8IZW8 715 aa11.35□□□□□ -0.59
MRPL55-216ENST00000366744 NSUN4Q96CB9 384 aaKnown RBP11.35□□□□□ -0.59
MRPL55-216ENST00000366744 TEPSINQ96N21 525 aa11.35□□□□□ -0.59
MRPL55-216ENST00000366744 CSRNP1Q96S65 589 aa11.35□□□□□ -0.59
MRPL55-216ENST00000366744 FZD1Q9UP38 647 aa11.35□□□□□ -0.59
MRPL55-216ENST00000366744 RFX7Q2KHR2 1363 aa11.35□□□□□ -0.59
MRPL55-216ENST00000366744 COL2A1P02458 1487 aaPredicted RBP11.35□□□□□ -0.59
MRPL55-216ENST00000366744 PTPRFP10586 1907 aa11.35□□□□□ -0.59
MRPL55-216ENST00000366744 GPR75-ASB3A0A0A6YYF3 556 aa11.34□□□□□ -0.59
MRPL55-216ENST00000366744 WDHD1O75717 1129 aaPredicted RBP11.34□□□□□ -0.59
MRPL55-216ENST00000366744 ZAP70P43403 619 aa11.34□□□□□ -0.59
MRPL55-216ENST00000366744 SPRYD7Q5W111 196 aa11.34□□□□□ -0.59
MRPL55-216ENST00000366744 OTUD7BQ6GQQ9 843 aa11.34□□□□□ -0.59
MRPL55-216ENST00000366744 SIRT2Q8IXJ6 389 aa11.34□□□□□ -0.59
MRPL55-216ENST00000366744 TEX11Q8IYF3 940 aa11.34□□□□□ -0.59
MRPL55-216ENST00000366744 FAM163AQ96GL9 167 aaPredicted RBP11.34□□□□□ -0.59
MRPL55-216ENST00000366744 WNK4Q96J92 1243 aa11.34□□□□□ -0.59
MRPL55-216ENST00000366744 CLMNQ96JQ2 1002 aa11.34□□□□□ -0.59
MRPL55-216ENST00000366744 DNAJC2Q99543 621 aaKnown RBP11.34□□□□□ -0.59
MRPL55-216ENST00000366744 IDI2Q9BXS1 227 aa11.34□□□□□ -0.59
MRPL55-216ENST00000366744 ELP3Q9H9T3 547 aa11.34□□□□□ -0.59
MRPL55-216ENST00000366744 USP2O75604 605 aaPredicted RBP11.33□□□□□ -0.6
MRPL55-216ENST00000366744 ALDH1A1P00352 501 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms