RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 PPIL2Q13356 520 aa26.44■■□□□ 1.82
CD47-202ENST00000361309 HABP4Q5JVS0 413 aaKnown RBP26.44■■□□□ 1.82
CD47-202ENST00000361309 MIGA2Q7L4E1 593 aa26.44■■□□□ 1.82
CD47-202ENST00000361309 EYA2O00167 538 aa26.43■■□□□ 1.82
CD47-202ENST00000361309 SLC5A1P13866 664 aa26.43■■□□□ 1.82
CD47-202ENST00000361309 RFX5P48382 616 aaPredicted RBP26.43■■□□□ 1.82
CD47-202ENST00000361309 WDR66Q8TBY9 1149 aa26.43■■□□□ 1.82
CD47-202ENST00000361309 ZNF341Q9BYN7 854 aa26.43■■□□□ 1.82
CD47-202ENST00000361309 CEP290O15078 2479 aa26.42■■□□□ 1.82
CD47-202ENST00000361309 INPP5BP32019 993 aa26.42■■□□□ 1.82
CD47-202ENST00000361309 LACTBP83111 547 aaPredicted RBP26.42■■□□□ 1.82
CD47-202ENST00000361309 KIF22Q14807 665 aa26.42■■□□□ 1.82
CD47-202ENST00000361309 SLC4A8Q2Y0W8 1093 aa26.42■■□□□ 1.82
CD47-202ENST00000361309 LPIN2Q92539 896 aa26.42■■□□□ 1.82
CD47-202ENST00000361309 MYCP01106 439 aaPredicted RBP26.41■■□□□ 1.82
CD47-202ENST00000361309 FAM151AQ8WW52 585 aa26.41■■□□□ 1.82
CD47-202ENST00000361309 MYH2Q9UKX2 1941 aa26.4■■□□□ 1.82
CD47-202ENST00000361309 ZEB1P37275 1124 aaPredicted RBP26.4■■□□□ 1.82
CD47-202ENST00000361309 PPATQ06203 517 aa26.4■■□□□ 1.82
CD47-202ENST00000361309 ATG9AQ7Z3C6 839 aa26.4■■□□□ 1.82
CD47-202ENST00000361309 SH3TC2Q8TF17 1288 aa26.4■■□□□ 1.82
CD47-202ENST00000361309 DAGLAQ9Y4D2 1042 aa26.4■■□□□ 1.82
CD47-202ENST00000361309 E9PSI1 815 aa26.39■■□□□ 1.82
CD47-202ENST00000361309 TCP10Q12799 353 aa26.39■■□□□ 1.82
CD47-202ENST00000361309 CDC42EP5Q6NZY7 148 aa26.39■■□□□ 1.82
CD47-202ENST00000361309 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.39■■□□□ 1.82
CD47-202ENST00000361309 ECM2O94769 699 aaPredicted RBP26.38■■□□□ 1.81
CD47-202ENST00000361309 DIXDC1Q155Q3 683 aa26.38■■□□□ 1.81
CD47-202ENST00000361309 C17orf99Q6UX52 265 aa26.37■■□□□ 1.81
CD47-202ENST00000361309 SIL1Q9H173 461 aa26.37■■□□□ 1.81
CD47-202ENST00000361309 ZNF112Q9UJU3 913 aa26.37■■□□□ 1.81
CD47-202ENST00000361309 MGAMO43451 1857 aa26.36■■□□□ 1.81
CD47-202ENST00000361309 GNRH1P01148 92 aa26.36■■□□□ 1.81
CD47-202ENST00000361309 PRDX5P30044 214 aa26.36■■□□□ 1.81
CD47-202ENST00000361309 NFIAQ12857 509 aa26.36■■□□□ 1.81
CD47-202ENST00000361309 CPA4Q9UI42 421 aa26.36■■□□□ 1.81
CD47-202ENST00000361309 DOCK2Q92608 1830 aa26.36■■□□□ 1.81
CD47-202ENST00000361309 SLFN5Q08AF3 891 aa26.35■■□□□ 1.81
CD47-202ENST00000361309 ANKRD23Q86SG2 305 aa26.35■■□□□ 1.81
CD47-202ENST00000361309 KCNH4Q9UQ05 1017 aa26.35■■□□□ 1.81
CD47-202ENST00000361309 PDHXO00330 501 aa26.34■■□□□ 1.81
CD47-202ENST00000361309 LDHBP07195 334 aaKnown RBP26.34■■□□□ 1.81
CD47-202ENST00000361309 CTGFP29279 349 aa26.34■■□□□ 1.81
CD47-202ENST00000361309 PRMT2P55345 433 aa26.34■■□□□ 1.81
CD47-202ENST00000361309 ATP2B3Q16720 1220 aa26.34■■□□□ 1.81
CD47-202ENST00000361309 ALDH1L2Q3SY69 923 aa26.34■■□□□ 1.81
CD47-202ENST00000361309 USP40Q9NVE5 1235 aa26.34■■□□□ 1.81
CD47-202ENST00000361309 FAM198AQ9UFP1 575 aa26.34■■□□□ 1.81
CD47-202ENST00000361309 PSMC4P43686 418 aa26.33■■□□□ 1.81
CD47-202ENST00000361309 SMC4Q9NTJ3 1288 aa26.33■■□□□ 1.81
CD47-202ENST00000361309 GNL3LQ9NVN8 582 aaKnown RBP26.33■■□□□ 1.81
CD47-202ENST00000361309 CEP126Q9P2H0 1117 aa26.33■■□□□ 1.81
CD47-202ENST00000361309 CIAO1O76071 339 aa26.32■■□□□ 1.8
CD47-202ENST00000361309 UBTFL1P0CB47 393 aaPredicted RBP26.32■■□□□ 1.8
CD47-202ENST00000361309 MOGSQ13724 837 aa26.32■■□□□ 1.8
CD47-202ENST00000361309 NOL9Q5SY16 702 aaKnown RBP26.32■■□□□ 1.8
CD47-202ENST00000361309 FBXO3Q9UK99 471 aa26.32■■□□□ 1.8
CD47-202ENST00000361309 ADGRA2Q96PE1 1338 aa26.32■■□□□ 1.8
CD47-202ENST00000361309 ZFPM1Q8IX07 1006 aa26.31■■□□□ 1.8
CD47-202ENST00000361309 TRIM47Q96LD4 638 aa26.31■■□□□ 1.8
CD47-202ENST00000361309 SRRDQ9UH36 339 aa26.31■■□□□ 1.8
CD47-202ENST00000361309 PTPRFP10586 1907 aa26.3■■□□□ 1.8
CD47-202ENST00000361309 PHKA1P46020 1223 aa26.3■■□□□ 1.8
CD47-202ENST00000361309 CDCA7LQ96GN5 454 aa26.3■■□□□ 1.8
CD47-202ENST00000361309 DENND2AQ9ULE3 1009 aa26.3■■□□□ 1.8
CD47-202ENST00000361309 SALL1Q9NSC2 1324 aa26.3■■□□□ 1.8
CD47-202ENST00000361309 FMNL1O95466 1100 aaPredicted RBP26.29■■□□□ 1.8
CD47-202ENST00000361309 OSBPP22059 807 aa26.29■■□□□ 1.8
CD47-202ENST00000361309 MTFR1Q15390 333 aa26.29■■□□□ 1.8
CD47-202ENST00000361309 SEMA3EO15041 775 aa26.28■■□□□ 1.8
CD47-202ENST00000361309 HOXD10P28358 340 aa26.28■■□□□ 1.8
CD47-202ENST00000361309 PA2G4Q9UQ80 394 aaKnown RBP26.28■■□□□ 1.8
CD47-202ENST00000361309 TRIOBPQ9H2D6 2365 aa26.27■■□□□ 1.8
CD47-202ENST00000361309 IL15P40933 162 aaPredicted RBP26.27■■□□□ 1.8
CD47-202ENST00000361309 FXR1P51114 621 aaKnown RBP eCLIP26.27■■□□□ 1.8
CD47-202ENST00000361309 RAET1EQ8TD07 263 aa26.27■■□□□ 1.8
CD47-202ENST00000361309 COLQQ9Y215 455 aaPredicted RBP26.27■■□□□ 1.8
CD47-202ENST00000361309 LRRFIP2Q9Y608 721 aaKnown RBP26.27■■□□□ 1.8
CD47-202ENST00000361309 PHIPQ8WWQ0 1821 aa26.27■■□□□ 1.8
CD47-202ENST00000361309 ATRNL1Q5VV63 1379 aa26.26■■□□□ 1.79
CD47-202ENST00000361309 MYPNQ86TC9 1320 aa26.26■■□□□ 1.79
CD47-202ENST00000361309 CXCL11O14625 94 aa26.26■■□□□ 1.79
CD47-202ENST00000361309 ADORA1P30542 326 aa26.26■■□□□ 1.79
CD47-202ENST00000361309 RGS3P49796 1198 aa26.26■■□□□ 1.79
CD47-202ENST00000361309 GPAT2Q6NUI2 795 aa26.26■■□□□ 1.79
CD47-202ENST00000361309 PARK7Q99497 189 aaKnown RBP26.26■■□□□ 1.79
CD47-202ENST00000361309 NOB1Q9ULX3 412 aaKnown RBP26.26■■□□□ 1.79
CD47-202ENST00000361309 DOCK1Q14185 1865 aa26.25■■□□□ 1.79
CD47-202ENST00000361309 PHF20L1A8MW92 1017 aa26.25■■□□□ 1.79
CD47-202ENST00000361309 CYP2C8P10632 490 aa26.25■■□□□ 1.79
CD47-202ENST00000361309 GRK4P32298 578 aa26.25■■□□□ 1.79
CD47-202ENST00000361309 CCDC102BQ68D86 513 aa26.25■■□□□ 1.79
CD47-202ENST00000361309 SHISA4Q96DD7 197 aa26.25■■□□□ 1.79
CD47-202ENST00000361309 H0YGN5 161 aa26.24■■□□□ 1.79
CD47-202ENST00000361309 SCYL3Q8IZE3 742 aa26.24■■□□□ 1.79
CD47-202ENST00000361309 ZGPATQ8N5A5 531 aaKnown RBP26.24■■□□□ 1.79
CD47-202ENST00000361309 IDI2Q9BXS1 227 aa26.24■■□□□ 1.79
CD47-202ENST00000361309 GAKO14976 1311 aa26.23■■□□□ 1.79
CD47-202ENST00000361309 DOCK3Q8IZD9 2030 aa26.23■■□□□ 1.79
CD47-202ENST00000361309 ENTPD3O75355 529 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms