RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 CLCN6P51797 869 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 CDC5LQ99459 802 aaKnown RBP8.83□□□□□ -1
KPNA1-201ENST00000344337 FAM207AQ9NSI2 230 aaPredicted RBP8.83□□□□□ -1
KPNA1-201ENST00000344337 ZBTB21Q9ULJ3 1066 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 SRGAP2O75044 1071 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 KIF20AO95235 890 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 KMT5BQ4FZB7 885 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 NCAPH2Q6IBW4 605 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 ORAI2Q96SN7 254 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 TRIM66O15016 1216 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 ACRBPQ8NEB7 543 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 PGBD1Q96JS3 809 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 FAN1Q9Y2M0 1017 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 ABCC4O15439 1325 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 USO1O60763 962 aaKnown RBP8.83□□□□□ -1
KPNA1-201ENST00000344337 LETM2Q2VYF4 491 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 TMCO4Q5TGY1 634 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 SND1Q7KZF4 910 aaKnown RBP eCLIP8.83□□□□□ -1
KPNA1-201ENST00000344337 HMG20BQ9P0W2 317 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 CD109Q6YHK3 1445 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 CCT5P48643 541 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 FNBP4Q8N3X1 1017 aaPredicted RBP8.83□□□□□ -1
KPNA1-201ENST00000344337 KIAA1468Q9P260 1216 aa8.83□□□□□ -1
KPNA1-201ENST00000344337 EBAG9O00559 213 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 RAPGEF1Q13905 1077 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 TTLL7Q6ZT98 887 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 SAMSN1Q9NSI8 373 aaKnown RBP8.82□□□□□ -1
KPNA1-201ENST00000344337 AKAP2Q9Y2D5 859 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 NDUFAB1O14561 156 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 ERLIN2O94905 339 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 HOXC9P31274 260 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 PEX19P40855 299 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 DIS3L2Q8IYB7 885 aaKnown RBP8.82□□□□□ -1
KPNA1-201ENST00000344337 CCDC42Q96M95 316 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.82□□□□□ -1
KPNA1-201ENST00000344337 DENND4BO75064 1496 aaPredicted RBP8.82□□□□□ -1
KPNA1-201ENST00000344337 CYP21A2P08686 494 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 DCAF17Q5H9S7 520 aaPredicted RBP8.82□□□□□ -1
KPNA1-201ENST00000344337 TAB3Q8N5C8 712 aaPredicted RBP8.82□□□□□ -1
KPNA1-201ENST00000344337 CCDC114Q96M63 670 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 GBP3Q9H0R5 595 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 TFR2Q9UP52 801 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 SYNMO15061 1565 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 E2F5Q15329 346 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 TYW1BQ6NUM6 668 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 RASGRP4Q8TDF6 673 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 TBC1D31Q96DN5 1066 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 SP4Q02446 784 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 NR5A1Q13285 461 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 TFCP2L1Q9NZI6 479 aa8.82□□□□□ -1
KPNA1-201ENST00000344337 MKRN4PQ13434 485 aaPredicted RBP8.81□□□□□ -1
KPNA1-201ENST00000344337 KRT40Q6A162 431 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 SYNE4Q8N205 404 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 EXOC1Q9NV70 894 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 RNF113AO15541 343 aaKnown RBP8.81□□□□□ -1
KPNA1-201ENST00000344337 NELFCDQ8IXH7 590 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 ABCC1P33527 1531 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 ADGRL2O95490 1459 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 MRC2Q9UBG0 1479 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 TRIM75PA6NK02 468 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 SNRPA1P09661 255 aaKnown RBP8.81□□□□□ -1
KPNA1-201ENST00000344337 KIF5AQ12840 1032 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 ZNF710Q8N1W2 664 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 RDH13Q8NBN7 331 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 LINS1Q8NG48 757 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 GOLPH3LQ9H4A5 285 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 SEC63Q9UGP8 760 aaKnown RBP8.81□□□□□ -1
KPNA1-201ENST00000344337 PPP2R2CQ9Y2T4 447 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 FOXN1O15353 648 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 HDXQ7Z353 690 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 WASF1Q92558 559 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 PSMD1Q99460 953 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 SUGCTQ9HAC7 445 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 KCNK9Q9NPC2 374 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 TBC1D8BQ0IIM8 1120 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 MTF1Q14872 753 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 CAPN12Q6ZSI9 719 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 CPLX4Q7Z7G2 160 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 NBPF11Q86T75 865 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 XAGE2Q96GT9 111 aa8.81□□□□□ -1
KPNA1-201ENST00000344337 DNMT1P26358 1616 aaKnown RBP8.8□□□□□ -1
KPNA1-201ENST00000344337 SLC35F6Q8N357 371 aa8.8□□□□□ -1
KPNA1-201ENST00000344337 ZNF496Q96IT1 587 aaPredicted RBP8.8□□□□□ -1
KPNA1-201ENST00000344337 STK38LQ9Y2H1 464 aa8.8□□□□□ -1
KPNA1-201ENST00000344337 PCDHA5Q9Y5H7 936 aa8.8□□□□□ -1
KPNA1-201ENST00000344337 AP5Z1O43299 807 aa8.8□□□□□ -1
KPNA1-201ENST00000344337 DPH6Q7L8W6 267 aa8.8□□□□□ -1
KPNA1-201ENST00000344337 PNMA8AQ86V59 439 aaPredicted RBP8.8□□□□□ -1
KPNA1-201ENST00000344337 CCDC50Q8IVM0 306 aa8.8□□□□□ -1
KPNA1-201ENST00000344337 KRI1Q8N9T8 703 aaKnown RBP8.8□□□□□ -1
KPNA1-201ENST00000344337 STARD3NLO95772 234 aa8.8□□□□□ -1
KPNA1-201ENST00000344337 AFAP1L1Q8TED9 768 aa8.8□□□□□ -1
KPNA1-201ENST00000344337 ZSWIM6Q9HCJ5 1215 aa8.8□□□□□ -1
KPNA1-201ENST00000344337 TCP11L1Q9NUJ3 509 aa8.8□□□□□ -1
KPNA1-201ENST00000344337 LUC7L2Q9Y383 392 aaKnown RBP8.8□□□□□ -1
KPNA1-201ENST00000344337 GOLGA6CA6NDK9 693 aa8.8□□□□□ -1
KPNA1-201ENST00000344337 VIMP08670 466 aaKnown RBP8.8□□□□□ -1
KPNA1-201ENST00000344337 GOLGA6DP0CG33 693 aa8.8□□□□□ -1
KPNA1-201ENST00000344337 ZNF622Q969S3 477 aaKnown RBP eCLIP8.8□□□□□ -14e-7■□□□□ 9.2
KPNA1-201ENST00000344337 KAT14Q9H8E8 782 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms