RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 SSH1Q8WYL5 1049 aa19.58■□□□□ 0.72
LINC01116-202ENST00000339037 MRIQ9BWK5 157 aa19.58■□□□□ 0.72
LINC01116-202ENST00000339037 USP44Q9H0E7 712 aa19.58■□□□□ 0.72
LINC01116-202ENST00000339037 ERO1BQ86YB8 467 aa19.57■□□□□ 0.72
LINC01116-202ENST00000339037 SNCAIPQ9Y6H5 919 aa19.57■□□□□ 0.72
LINC01116-202ENST00000339037 E9PSI1 815 aa19.56■□□□□ 0.72
LINC01116-202ENST00000339037 CETPP11597 493 aa19.56■□□□□ 0.72
LINC01116-202ENST00000339037 FGFR2P21802 821 aa19.56■□□□□ 0.72
LINC01116-202ENST00000339037 DCAF15Q66K64 600 aa19.56■□□□□ 0.72
LINC01116-202ENST00000339037 HHIPL2Q6UWX4 724 aa19.56■□□□□ 0.72
LINC01116-202ENST00000339037 ZKSCAN4Q969J2 545 aaPredicted RBP19.56■□□□□ 0.72
LINC01116-202ENST00000339037 GCC1Q96CN9 775 aa19.56■□□□□ 0.72
LINC01116-202ENST00000339037 RPAP1Q9BWH6 1393 aaPredicted RBP19.56■□□□□ 0.72
LINC01116-202ENST00000339037 EYA2O00167 538 aa19.55■□□□□ 0.72
LINC01116-202ENST00000339037 SLC5A1P13866 664 aa19.55■□□□□ 0.72
LINC01116-202ENST00000339037 SNAPC2Q13487 334 aa19.55■□□□□ 0.72
LINC01116-202ENST00000339037 SLC9C1Q4G0N8 1177 aa19.55■□□□□ 0.72
LINC01116-202ENST00000339037 WDR66Q8TBY9 1149 aa19.55■□□□□ 0.72
LINC01116-202ENST00000339037 ZNF333Q96JL9 665 aa19.55■□□□□ 0.72
LINC01116-202ENST00000339037 RBBP6Q7Z6E9 1792 aaKnown RBP19.55■□□□□ 0.72
LINC01116-202ENST00000339037 IRF6O14896 467 aa19.54■□□□□ 0.72
LINC01116-202ENST00000339037 NBPF11Q86T75 865 aa19.54■□□□□ 0.72
LINC01116-202ENST00000339037 LPIN2Q92539 896 aa19.54■□□□□ 0.72
LINC01116-202ENST00000339037 TMEM106CQ9BVX2 250 aa19.54■□□□□ 0.72
LINC01116-202ENST00000339037 ZCCHC17Q9NP64 241 aaKnown RBP19.54■□□□□ 0.72
LINC01116-202ENST00000339037 PTCH2Q9Y6C5 1203 aa19.54■□□□□ 0.72
LINC01116-202ENST00000339037 BTBD19C9JJ37 291 aa19.53■□□□□ 0.72
LINC01116-202ENST00000339037 TLR2O60603 784 aa19.53■□□□□ 0.72
LINC01116-202ENST00000339037 EN2P19622 333 aaPredicted RBP19.53■□□□□ 0.72
LINC01116-202ENST00000339037 RFX5P48382 616 aaPredicted RBP19.53■□□□□ 0.72
LINC01116-202ENST00000339037 PPIL2Q13356 520 aa19.53■□□□□ 0.72
LINC01116-202ENST00000339037 CEP290O15078 2479 aa19.53■□□□□ 0.72
LINC01116-202ENST00000339037 KIF22Q14807 665 aa19.52■□□□□ 0.72
LINC01116-202ENST00000339037 MIGA2Q7L4E1 593 aa19.52■□□□□ 0.72
LINC01116-202ENST00000339037 ZNF341Q9BYN7 854 aa19.52■□□□□ 0.72
LINC01116-202ENST00000339037 PPATQ06203 517 aa19.51■□□□□ 0.71
LINC01116-202ENST00000339037 ALDH1L2Q3SY69 923 aa19.51■□□□□ 0.71
LINC01116-202ENST00000339037 SMC4Q9NTJ3 1288 aa19.51■□□□□ 0.71
LINC01116-202ENST00000339037 LACTBP83111 547 aaPredicted RBP19.5■□□□□ 0.71
LINC01116-202ENST00000339037 DIXDC1Q155Q3 683 aa19.5■□□□□ 0.71
LINC01116-202ENST00000339037 ATG9AQ7Z3C6 839 aa19.5■□□□□ 0.71
LINC01116-202ENST00000339037 FAM151AQ8WW52 585 aa19.5■□□□□ 0.71
LINC01116-202ENST00000339037 ARHGAP39Q9C0H5 1083 aa19.5■□□□□ 0.71
LINC01116-202ENST00000339037 SIL1Q9H173 461 aa19.5■□□□□ 0.71
LINC01116-202ENST00000339037 DAGLAQ9Y4D2 1042 aa19.5■□□□□ 0.71
LINC01116-202ENST00000339037 RANBP2P49792 3224 aaKnown RBP19.5■□□□□ 0.71
LINC01116-202ENST00000339037 UBTFL1P0CB47 393 aaPredicted RBP19.49■□□□□ 0.71
LINC01116-202ENST00000339037 PRDX5P30044 214 aa19.49■□□□□ 0.71
LINC01116-202ENST00000339037 INPP5BP32019 993 aa19.49■□□□□ 0.71
LINC01116-202ENST00000339037 SLFN5Q08AF3 891 aa19.49■□□□□ 0.71
LINC01116-202ENST00000339037 TCP10Q12799 353 aa19.49■□□□□ 0.71
LINC01116-202ENST00000339037 ATP2B3Q16720 1220 aa19.49■□□□□ 0.71
LINC01116-202ENST00000339037 SLC4A8Q2Y0W8 1093 aa19.49■□□□□ 0.71
LINC01116-202ENST00000339037 CDC42EP5Q6NZY7 148 aa19.49■□□□□ 0.71
LINC01116-202ENST00000339037 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.49■□□□□ 0.71
LINC01116-202ENST00000339037 GNL3LQ9NVN8 582 aaKnown RBP19.49■□□□□ 0.71
LINC01116-202ENST00000339037 CIAO1O76071 339 aa19.48■□□□□ 0.71
LINC01116-202ENST00000339037 GNRH1P01148 92 aa19.48■□□□□ 0.71
LINC01116-202ENST00000339037 NFIAQ12857 509 aa19.48■□□□□ 0.71
LINC01116-202ENST00000339037 CEP126Q9P2H0 1117 aa19.48■□□□□ 0.71
LINC01116-202ENST00000339037 MYH13Q9UKX3 1938 aa19.47■□□□□ 0.71
LINC01116-202ENST00000339037 MYCP01106 439 aaPredicted RBP19.47■□□□□ 0.71
LINC01116-202ENST00000339037 LDHBP07195 334 aaKnown RBP19.47■□□□□ 0.71
LINC01116-202ENST00000339037 SH3TC2Q8TF17 1288 aa19.47■□□□□ 0.71
LINC01116-202ENST00000339037 HABP4Q5JVS0 413 aaKnown RBP19.46■□□□□ 0.71
LINC01116-202ENST00000339037 ANKRD23Q86SG2 305 aa19.46■□□□□ 0.71
LINC01116-202ENST00000339037 ZNF112Q9UJU3 913 aa19.46■□□□□ 0.71
LINC01116-202ENST00000339037 KCNH4Q9UQ05 1017 aa19.46■□□□□ 0.71
LINC01116-202ENST00000339037 SALL1Q9NSC2 1324 aa19.46■□□□□ 0.71
LINC01116-202ENST00000339037 PDHXO00330 501 aa19.45■□□□□ 0.7
LINC01116-202ENST00000339037 SEMA3EO15041 775 aa19.45■□□□□ 0.7
LINC01116-202ENST00000339037 PRMT2P55345 433 aa19.45■□□□□ 0.7
LINC01116-202ENST00000339037 C17orf99Q6UX52 265 aa19.45■□□□□ 0.7
LINC01116-202ENST00000339037 CDCA7LQ96GN5 454 aa19.45■□□□□ 0.7
LINC01116-202ENST00000339037 USP40Q9NVE5 1235 aa19.45■□□□□ 0.7
LINC01116-202ENST00000339037 FAM198AQ9UFP1 575 aa19.45■□□□□ 0.7
LINC01116-202ENST00000339037 CPA4Q9UI42 421 aa19.45■□□□□ 0.7
LINC01116-202ENST00000339037 DENND2AQ9ULE3 1009 aa19.45■□□□□ 0.7
LINC01116-202ENST00000339037 ECM2O94769 699 aaPredicted RBP19.44■□□□□ 0.7
LINC01116-202ENST00000339037 IL15P40933 162 aaPredicted RBP19.44■□□□□ 0.7
LINC01116-202ENST00000339037 PHKA1P46020 1223 aa19.44■□□□□ 0.7
LINC01116-202ENST00000339037 NOL9Q5SY16 702 aaKnown RBP19.44■□□□□ 0.7
LINC01116-202ENST00000339037 HDAC5Q9UQL6 1122 aa19.44■□□□□ 0.7
LINC01116-202ENST00000339037 ZSWIM8A7E2V4 1837 aa19.44■□□□□ 0.7
LINC01116-202ENST00000339037 PSMC4P43686 418 aa19.43■□□□□ 0.7
LINC01116-202ENST00000339037 LRRFIP2Q9Y608 721 aaKnown RBP19.43■□□□□ 0.7
LINC01116-202ENST00000339037 ZGPATQ8N5A5 531 aaKnown RBP19.42■□□□□ 0.7
LINC01116-202ENST00000339037 TRIM47Q96LD4 638 aa19.42■□□□□ 0.7
LINC01116-202ENST00000339037 PARK7Q99497 189 aaKnown RBP19.42■□□□□ 0.7
LINC01116-202ENST00000339037 SRRDQ9UH36 339 aa19.42■□□□□ 0.7
LINC01116-202ENST00000339037 NOB1Q9ULX3 412 aaKnown RBP19.42■□□□□ 0.7
LINC01116-202ENST00000339037 PA2G4Q9UQ80 394 aaKnown RBP19.42■□□□□ 0.7
LINC01116-202ENST00000339037 ADGRA2Q96PE1 1338 aa19.42■□□□□ 0.7
LINC01116-202ENST00000339037 CT47B1P0C2W7 299 aaPredicted RBP19.41■□□□□ 0.7
LINC01116-202ENST00000339037 MOGSQ13724 837 aa19.41■□□□□ 0.7
LINC01116-202ENST00000339037 CCDC102BQ68D86 513 aa19.41■□□□□ 0.7
LINC01116-202ENST00000339037 ZFPM1Q8IX07 1006 aa19.41■□□□□ 0.7
LINC01116-202ENST00000339037 PLCD3Q8N3E9 789 aa19.41■□□□□ 0.7
LINC01116-202ENST00000339037 API5Q9BZZ5 524 aaKnown RBP19.41■□□□□ 0.7
LINC01116-202ENST00000339037 SZT2Q5T011 3432 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms