RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 CETPP11597 493 aa17.81■□□□□ 0.44
RPP40-201ENST00000319533 CACNB1Q02641 598 aaPredicted RBP17.81■□□□□ 0.44
RPP40-201ENST00000319533 ARHGEF6Q15052 776 aa17.81■□□□□ 0.44
RPP40-201ENST00000319533 WDR66Q8TBY9 1149 aa17.81■□□□□ 0.44
RPP40-201ENST00000319533 FBXO3Q9UK99 471 aa17.81■□□□□ 0.44
RPP40-201ENST00000319533 SLC5A1P13866 664 aa17.8■□□□□ 0.44
RPP40-201ENST00000319533 PPIL2Q13356 520 aa17.8■□□□□ 0.44
RPP40-201ENST00000319533 ATG9AQ7Z3C6 839 aa17.8■□□□□ 0.44
RPP40-201ENST00000319533 ZNF333Q96JL9 665 aa17.8■□□□□ 0.44
RPP40-201ENST00000319533 WRNIP1Q96S55 665 aa17.8■□□□□ 0.44
RPP40-201ENST00000319533 IRF6O14896 467 aa17.79■□□□□ 0.44
RPP40-201ENST00000319533 TLR2O60603 784 aa17.79■□□□□ 0.44
RPP40-201ENST00000319533 SNAPC2Q13487 334 aa17.79■□□□□ 0.44
RPP40-201ENST00000319533 DCAF15Q66K64 600 aa17.79■□□□□ 0.44
RPP40-201ENST00000319533 FAM151AQ8WW52 585 aa17.79■□□□□ 0.44
RPP40-201ENST00000319533 ZKSCAN4Q969J2 545 aaPredicted RBP17.79■□□□□ 0.44
RPP40-201ENST00000319533 ZNF112Q9UJU3 913 aa17.79■□□□□ 0.44
RPP40-201ENST00000319533 BTBD19C9JJ37 291 aa17.78■□□□□ 0.44
RPP40-201ENST00000319533 CIAO1O76071 339 aa17.78■□□□□ 0.44
RPP40-201ENST00000319533 TRMT2AQ8IZ69 625 aaKnown RBP17.78■□□□□ 0.44
RPP40-201ENST00000319533 GCC1Q96CN9 775 aa17.78■□□□□ 0.44
RPP40-201ENST00000319533 ZNF341Q9BYN7 854 aa17.78■□□□□ 0.44
RPP40-201ENST00000319533 WDHD1O75717 1129 aaPredicted RBP17.77■□□□□ 0.44
RPP40-201ENST00000319533 EN2P19622 333 aaPredicted RBP17.77■□□□□ 0.44
RPP40-201ENST00000319533 PPATQ06203 517 aa17.77■□□□□ 0.44
RPP40-201ENST00000319533 DAGLAQ9Y4D2 1042 aa17.77■□□□□ 0.44
RPP40-201ENST00000319533 PTCH2Q9Y6C5 1203 aa17.77■□□□□ 0.44
RPP40-201ENST00000319533 MYH13Q9UKX3 1938 aa17.76■□□□□ 0.43
RPP40-201ENST00000319533 SALL1Q9NSC2 1324 aa17.76■□□□□ 0.43
RPP40-201ENST00000319533 CCER2I3L3R5 266 aa17.76■□□□□ 0.43
RPP40-201ENST00000319533 LACTBP83111 547 aaPredicted RBP17.76■□□□□ 0.43
RPP40-201ENST00000319533 CDC42EP5Q6NZY7 148 aa17.76■□□□□ 0.43
RPP40-201ENST00000319533 NBPF11Q86T75 865 aa17.76■□□□□ 0.43
RPP40-201ENST00000319533 GNRH1P01148 92 aa17.75■□□□□ 0.43
RPP40-201ENST00000319533 INPP5BP32019 993 aa17.75■□□□□ 0.43
RPP40-201ENST00000319533 SLC9C1Q4G0N8 1177 aa17.75■□□□□ 0.43
RPP40-201ENST00000319533 DIEXFQ68CQ4 756 aaKnown RBP17.75■□□□□ 0.43
RPP40-201ENST00000319533 MIGA2Q7L4E1 593 aa17.75■□□□□ 0.43
RPP40-201ENST00000319533 TMEM106CQ9BVX2 250 aa17.75■□□□□ 0.43
RPP40-201ENST00000319533 SMC4Q9NTJ3 1288 aa17.75■□□□□ 0.43
RPP40-201ENST00000319533 KCNH4Q9UQ05 1017 aa17.75■□□□□ 0.43
RPP40-201ENST00000319533 SEMA3EO15041 775 aa17.74■□□□□ 0.43
RPP40-201ENST00000319533 CT47B1P0C2W7 299 aaPredicted RBP17.74■□□□□ 0.43
RPP40-201ENST00000319533 UBTFL1P0CB47 393 aaPredicted RBP17.74■□□□□ 0.43
RPP40-201ENST00000319533 PRDX5P30044 214 aa17.74■□□□□ 0.43
RPP40-201ENST00000319533 PRMT2P55345 433 aa17.74■□□□□ 0.43
RPP40-201ENST00000319533 NFIAQ12857 509 aa17.74■□□□□ 0.43
RPP40-201ENST00000319533 DIXDC1Q155Q3 683 aa17.74■□□□□ 0.43
RPP40-201ENST00000319533 ATP2B3Q16720 1220 aa17.74■□□□□ 0.43
RPP40-201ENST00000319533 NOL9Q5SY16 702 aaKnown RBP17.74■□□□□ 0.43
RPP40-201ENST00000319533 C17orf99Q6UX52 265 aa17.74■□□□□ 0.43
RPP40-201ENST00000319533 ANKRD23Q86SG2 305 aa17.74■□□□□ 0.43
RPP40-201ENST00000319533 CDCA7LQ96GN5 454 aa17.74■□□□□ 0.43
RPP40-201ENST00000319533 CEP126Q9P2H0 1117 aa17.74■□□□□ 0.43
RPP40-201ENST00000319533 IL15P40933 162 aaPredicted RBP17.73■□□□□ 0.43
RPP40-201ENST00000319533 MOGSQ13724 837 aa17.73■□□□□ 0.43
RPP40-201ENST00000319533 KIF22Q14807 665 aa17.73■□□□□ 0.43
RPP40-201ENST00000319533 SAMD1Q6SPF0 538 aaPredicted RBP17.73■□□□□ 0.43
RPP40-201ENST00000319533 ARHGAP39Q9C0H5 1083 aa17.73■□□□□ 0.43
RPP40-201ENST00000319533 GNL3LQ9NVN8 582 aaKnown RBP17.73■□□□□ 0.43
RPP40-201ENST00000319533 FAM198AQ9UFP1 575 aa17.73■□□□□ 0.43
RPP40-201ENST00000319533 ADGRA2Q96PE1 1338 aa17.72■□□□□ 0.43
RPP40-201ENST00000319533 LDHBP07195 334 aaKnown RBP17.72■□□□□ 0.43
RPP40-201ENST00000319533 DENND2AQ9ULE3 1009 aa17.72■□□□□ 0.43
RPP40-201ENST00000319533 HDAC5Q9UQL6 1122 aa17.72■□□□□ 0.43
RPP40-201ENST00000319533 ATRNL1Q5VV63 1379 aa17.71■□□□□ 0.43
RPP40-201ENST00000319533 ZSWIM8A7E2V4 1837 aa17.71■□□□□ 0.43
RPP40-201ENST00000319533 PHKA1P46020 1223 aa17.71■□□□□ 0.43
RPP40-201ENST00000319533 TCP10Q12799 353 aa17.71■□□□□ 0.43
RPP40-201ENST00000319533 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.71■□□□□ 0.43
RPP40-201ENST00000319533 IDI2Q9BXS1 227 aa17.71■□□□□ 0.43
RPP40-201ENST00000319533 SIL1Q9H173 461 aa17.71■□□□□ 0.43
RPP40-201ENST00000319533 COPRSQ9NQ92 184 aa17.71■□□□□ 0.43
RPP40-201ENST00000319533 USP40Q9NVE5 1235 aa17.71■□□□□ 0.43
RPP40-201ENST00000319533 NOB1Q9ULX3 412 aaKnown RBP17.71■□□□□ 0.43
RPP40-201ENST00000319533 GAKO14976 1311 aa17.71■□□□□ 0.42
RPP40-201ENST00000319533 PDS5AQ29RF7 1337 aaKnown RBP17.71■□□□□ 0.42
RPP40-201ENST00000319533 PDHXO00330 501 aa17.7■□□□□ 0.42
RPP40-201ENST00000319533 CTGFP29279 349 aa17.7■□□□□ 0.42
RPP40-201ENST00000319533 MAP3K10Q02779 954 aa17.7■□□□□ 0.42
RPP40-201ENST00000319533 HABP4Q5JVS0 413 aaKnown RBP17.7■□□□□ 0.42
RPP40-201ENST00000319533 API5Q9BZZ5 524 aaKnown RBP17.7■□□□□ 0.42
RPP40-201ENST00000319533 LRRFIP2Q9Y608 721 aaKnown RBP17.7■□□□□ 0.42
RPP40-201ENST00000319533 RFX7Q2KHR2 1363 aa17.69■□□□□ 0.42
RPP40-201ENST00000319533 PHF20L1A8MW92 1017 aa17.69■□□□□ 0.42
RPP40-201ENST00000319533 CXCL11O14625 94 aa17.69■□□□□ 0.42
RPP40-201ENST00000319533 ENTPD3O75355 529 aa17.69■□□□□ 0.42
RPP40-201ENST00000319533 CCDC102BQ68D86 513 aa17.69■□□□□ 0.42
RPP40-201ENST00000319533 ZFPM1Q8IX07 1006 aa17.69■□□□□ 0.42
RPP40-201ENST00000319533 ZGPATQ8N5A5 531 aaKnown RBP17.69■□□□□ 0.42
RPP40-201ENST00000319533 SH3TC2Q8TF17 1288 aa17.69■□□□□ 0.42
RPP40-201ENST00000319533 FAM163AQ96GL9 167 aaPredicted RBP17.69■□□□□ 0.42
RPP40-201ENST00000319533 PA2G4Q9UQ80 394 aaKnown RBP17.69■□□□□ 0.42
RPP40-201ENST00000319533 SLC4A8Q2Y0W8 1093 aa17.68■□□□□ 0.42
RPP40-201ENST00000319533 GPAT2Q6NUI2 795 aa17.68■□□□□ 0.42
RPP40-201ENST00000319533 TRIM47Q96LD4 638 aa17.68■□□□□ 0.42
RPP40-201ENST00000319533 SRRDQ9UH36 339 aa17.68■□□□□ 0.42
RPP40-201ENST00000319533 CPA4Q9UI42 421 aa17.68■□□□□ 0.42
RPP40-201ENST00000319533 ADORA1P30542 326 aa17.67■□□□□ 0.42
RPP40-201ENST00000319533 SH3BP5LQ7L8J4 393 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms