RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 FRMD3A2A2Y4 597 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 MINDY4BA8MYZ0 360 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 GRM8O00222 908 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 PRC1O43663 620 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 PDE6BP35913 854 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 IARSP41252 1262 aaKnown RBP8.58□□□□□ -1.04
CDHR3-201ENST00000317716 PWP2Q15269 919 aaKnown RBP8.58□□□□□ -1.04
CDHR3-201ENST00000317716 MAATS1Q7Z4T9 603 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 IRX2Q9BZI1 471 aaPredicted RBP8.58□□□□□ -1.04
CDHR3-201ENST00000317716 CCDC113Q9H0I3 377 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 RBM6P78332 1123 aaKnown RBP8.58□□□□□ -1.04
CDHR3-201ENST00000317716 MAP9Q49MG5 647 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 DHX32Q7L7V1 743 aaKnown RBP8.58□□□□□ -1.04
CDHR3-201ENST00000317716 SCLT1Q96NL6 688 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 SLF1Q9BQI6 1058 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 UBAC1Q9BSL1 405 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 OSBPL3Q9H4L5 887 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 CNNM1Q9NRU3 951 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 ADAM21Q9UKJ8 722 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 DLC1Q96QB1 1528 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 GOLGA6L10A6NI86 522 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 IFIT3O14879 490 aaKnown RBP8.57□□□□□ -1.04
CDHR3-201ENST00000317716 CTIFO43310 598 aaKnown RBP8.57□□□□□ -1.04
CDHR3-201ENST00000317716 RXRBP28702 533 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 SCRN1Q12765 414 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 IGSF22Q8N9C0 903 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 PLIN2Q99541 437 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 TTC41PQ6P2S7 1318 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 MACROD2A1Z1Q3 448 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 GOLGA6L9A6NEM1 432 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 TMEM232C9JQI7 657 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 TDO2P48775 406 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 NCBP3Q53F19 620 aaKnown RBP8.57□□□□□ -1.04
CDHR3-201ENST00000317716 LMBR1LQ6UX01 489 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 COPS6Q7L5N1 327 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 PLA2G4DQ86XP0 818 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 AFAP1L1Q8TED9 768 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 XAGE3Q8WTP9 111 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 ZKSCAN3Q9BRR0 538 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 GOLPH3LQ9H4A5 285 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 TRPC5Q9UL62 973 aaPredicted RBP8.57□□□□□ -1.04
CDHR3-201ENST00000317716 SAMM50Q9Y512 469 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 hCG_1642624A0A1W2PR95 340 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 PRAMEF22A3QJZ6 481 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 ENC1O14682 589 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 HGSO14964 777 aaPredicted RBP8.57□□□□□ -1.04
CDHR3-201ENST00000317716 MYO1BO43795 1136 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 PFKFB1P16118 471 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 CCT5P48643 541 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 OTUD6BQ8N6M0 293 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 SUCLG2Q96I99 432 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 ZHX3Q9H4I2 956 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 FEZ2Q9UHY8 353 aaPredicted RBP8.57□□□□□ -1.04
CDHR3-201ENST00000317716 JRKLQ9Y4A0 524 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 CD163L1Q9NR16 1453 aa8.57□□□□□ -1.04
CDHR3-201ENST00000317716 WDR17Q8IZU2 1322 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 NALCNQ8IZF0 1738 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 POLR2DO15514 142 aaKnown RBP8.56□□□□□ -1.04
CDHR3-201ENST00000317716 ZPR1O75312 459 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 HMGB1P09429 215 aaKnown RBP8.56□□□□□ -1.04
CDHR3-201ENST00000317716 ATP1A2P50993 1020 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 SSH3Q8TE77 659 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 FBXO41Q8TF61 875 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 IFT81Q8WYA0 676 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 GOLGA6L7A0A1B0GV03 622 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 ARHGAP6O43182 974 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 ZNF853P0CG23 659 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 HPDP32754 393 aaPredicted RBP8.56□□□□□ -1.04
CDHR3-201ENST00000317716 CCDC57Q2TAC2 916 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 TMEM67Q5HYA8 995 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 RRAGBQ5VZM2 374 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 ANO1Q5XXA6 986 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 GRAMD1CQ8IYS0 662 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 CEP112Q8N8E3 955 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 TMEM87AQ8NBN3 555 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 IL17REQ8NFR9 667 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 FAM204AQ9H8W3 233 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 SUGCTQ9HAC7 445 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 EFCAB8A8MWE9 144 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 AKR1B15C9JRZ8 316 aaPredicted RBP8.56□□□□□ -1.04
CDHR3-201ENST00000317716 NLRP12P59046 1061 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 TDRD12Q587J7 1177 aaKnown RBP8.56□□□□□ -1.04
CDHR3-201ENST00000317716 CMTR1Q8N1G2 835 aaKnown RBP8.56□□□□□ -1.04
CDHR3-201ENST00000317716 GPR161Q8N6U8 529 aaKnown RBP8.56□□□□□ -1.04
CDHR3-201ENST00000317716 PI4K2BQ8TCG2 481 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 TTC14Q96N46 770 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 KIAA1210Q9ULL0 1709 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 TBC1D2BQ9UPU7 963 aa8.56□□□□□ -1.04
CDHR3-201ENST00000317716 ZNF142P52746 1687 aaPredicted RBP8.56□□□□□ -1.04
CDHR3-201ENST00000317716 NDUFAB1O14561 156 aa8.55□□□□□ -1.04
CDHR3-201ENST00000317716 CDKL5O76039 1030 aa8.55□□□□□ -1.04
CDHR3-201ENST00000317716 YEATS4O95619 227 aa8.55□□□□□ -1.04
CDHR3-201ENST00000317716 ACTN2P35609 894 aa8.55□□□□□ -1.04
CDHR3-201ENST00000317716 ATP2B2Q01814 1243 aa8.55□□□□□ -1.04
CDHR3-201ENST00000317716 GBP6Q6ZN66 633 aa8.55□□□□□ -1.04
CDHR3-201ENST00000317716 AIFM3Q96NN9 605 aa8.55□□□□□ -1.04
CDHR3-201ENST00000317716 SLC12A7Q9Y666 1083 aa8.55□□□□□ -1.04
CDHR3-201ENST00000317716 PNPLA6Q8IY17 1366 aa8.55□□□□□ -1.04
CDHR3-201ENST00000317716 XBP1P17861 261 aa8.55□□□□□ -1.04
CDHR3-201ENST00000317716 E4F1Q66K89 784 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 707 ms