RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 GJC1P36383 396 aa17.29■□□□□ 0.36
HCFC1-201ENST00000310441 SPOPO43791 374 aa17.28■□□□□ 0.36
HCFC1-201ENST00000310441 DENND2CQ68D51 928 aa17.28■□□□□ 0.36
HCFC1-201ENST00000310441 CNPY2Q9Y2B0 182 aa17.28■□□□□ 0.36
HCFC1-201ENST00000310441 ARAP1Q96P48 1450 aa17.28■□□□□ 0.36
HCFC1-201ENST00000310441 AFAP1Q8N556 730 aa17.28■□□□□ 0.36
HCFC1-201ENST00000310441 LEO1Q8WVC0 666 aaPredicted RBP17.28■□□□□ 0.36
HCFC1-201ENST00000310441 GDPD2Q9HCC8 539 aa17.28■□□□□ 0.36
HCFC1-201ENST00000310441 CLNS1AP54105 237 aaKnown RBP17.28■□□□□ 0.36
HCFC1-201ENST00000310441 RFC4P35249 363 aa17.28■□□□□ 0.36
HCFC1-201ENST00000310441 NBPF5PQ86XG9 351 aaPredicted RBP17.28■□□□□ 0.36
HCFC1-201ENST00000310441 CCDC186Q7Z3E2 898 aa17.28■□□□□ 0.36
HCFC1-201ENST00000310441 RAB17Q9H0T7 212 aa17.28■□□□□ 0.36
HCFC1-201ENST00000310441 TSPYL2Q9H2G4 693 aaPredicted RBP17.28■□□□□ 0.36
HCFC1-201ENST00000310441 FNBP1Q96RU3 617 aa17.27■□□□□ 0.36
HCFC1-201ENST00000310441 SMAP1Q8IYB5 467 aaPredicted RBP17.27■□□□□ 0.36
HCFC1-201ENST00000310441 SV2BQ7L1I2 683 aa17.27■□□□□ 0.36
HCFC1-201ENST00000310441 PPFIA3O75145 1194 aa17.27■□□□□ 0.35
HCFC1-201ENST00000310441 LZTFL1Q9NQ48 299 aa17.27■□□□□ 0.35
HCFC1-201ENST00000310441 SMIM23A6NLE4 172 aa17.27■□□□□ 0.35
HCFC1-201ENST00000310441 LMOD1P29536 600 aaPredicted RBP17.27■□□□□ 0.35
HCFC1-201ENST00000310441 RASA3Q14644 834 aa17.27■□□□□ 0.35
HCFC1-201ENST00000310441 MAP3K1Q13233 1512 aa17.26■□□□□ 0.35
HCFC1-201ENST00000310441 UAP1Q16222 522 aaPredicted RBP17.26■□□□□ 0.35
HCFC1-201ENST00000310441 VTI1AQ96AJ9 217 aa17.26■□□□□ 0.35
HCFC1-201ENST00000310441 ZNF131P52739 623 aa17.26■□□□□ 0.35
HCFC1-201ENST00000310441 BRDTQ58F21 947 aaPredicted RBP17.26■□□□□ 0.35
HCFC1-201ENST00000310441 NAA16Q6N069 864 aaPredicted RBP17.26■□□□□ 0.35
HCFC1-201ENST00000310441 MIS18AQ9NYP9 233 aa17.26■□□□□ 0.35
HCFC1-201ENST00000310441 GABPB1Q06547 395 aaPredicted RBP17.26■□□□□ 0.35
HCFC1-201ENST00000310441 FCHSD1Q86WN1 690 aa17.26■□□□□ 0.35
HCFC1-201ENST00000310441 ZMYND15Q9H091 742 aa17.26■□□□□ 0.35
HCFC1-201ENST00000310441 SUDS3Q9H7L9 328 aaPredicted RBP17.26■□□□□ 0.35
HCFC1-201ENST00000310441 SLC4A4Q9Y6R1 1079 aa17.26■□□□□ 0.35
HCFC1-201ENST00000310441 IL15P40933 162 aaPredicted RBP17.26■□□□□ 0.35
HCFC1-201ENST00000310441 HAND2P61296 217 aa17.26■□□□□ 0.35
HCFC1-201ENST00000310441 Q6ZUG5 572 aa17.26■□□□□ 0.35
HCFC1-201ENST00000310441 FLOT1O75955 427 aa17.26■□□□□ 0.35
HCFC1-201ENST00000310441 KRBA2Q6ZNG9 492 aa17.26■□□□□ 0.35
HCFC1-201ENST00000310441 DACT1Q9NYF0 836 aa17.26■□□□□ 0.35
HCFC1-201ENST00000310441 KIF1BO60333 1816 aa17.26■□□□□ 0.35
HCFC1-201ENST00000310441 RHOXF2BP0C7M4 288 aa17.26■□□□□ 0.35
HCFC1-201ENST00000310441 BCRP11274 1271 aa17.26■□□□□ 0.35
HCFC1-201ENST00000310441 KRT5P13647 590 aa17.26■□□□□ 0.35
HCFC1-201ENST00000310441 CCT6AP40227 531 aaKnown RBP17.26■□□□□ 0.35
HCFC1-201ENST00000310441 RHOXF2Q9BQY4 288 aa17.26■□□□□ 0.35
HCFC1-201ENST00000310441 KRT3P12035 628 aa17.25■□□□□ 0.35
HCFC1-201ENST00000310441 HPDP32754 393 aaPredicted RBP17.25■□□□□ 0.35
HCFC1-201ENST00000310441 PHBP35232 272 aa17.25■□□□□ 0.35
HCFC1-201ENST00000310441 TTC16Q8NEE8 873 aa17.25■□□□□ 0.35
HCFC1-201ENST00000310441 SOS1Q07889 1333 aaPredicted RBP17.25■□□□□ 0.35
HCFC1-201ENST00000310441 TLDC2A0PJX2 215 aa17.25■□□□□ 0.35
HCFC1-201ENST00000310441 EXOC5O00471 708 aa17.25■□□□□ 0.35
HCFC1-201ENST00000310441 PHLDB3Q6NSJ2 640 aa17.25■□□□□ 0.35
HCFC1-201ENST00000310441 MYL5Q02045 173 aa17.25■□□□□ 0.35
HCFC1-201ENST00000310441 PAK2Q13177 524 aa17.25■□□□□ 0.35
HCFC1-201ENST00000310441 PPP1R12CQ9BZL4 782 aa17.25■□□□□ 0.35
HCFC1-201ENST00000310441 SEPT10Q9P0V9 454 aa17.25■□□□□ 0.35
HCFC1-201ENST00000310441 AQRO60306 1485 aaKnown RBP eCLIP17.25■□□□□ 0.355e-7■■■■■ 30.7
HCFC1-201ENST00000310441 GBP5Q96PP8 586 aa17.25■□□□□ 0.35
HCFC1-201ENST00000310441 DDX27Q96GQ7 796 aaKnown RBP17.25■□□□□ 0.35
HCFC1-201ENST00000310441 CFAP221Q4G0U5 840 aa17.25■□□□□ 0.35
HCFC1-201ENST00000310441 DCAF17Q5H9S7 520 aaPredicted RBP17.25■□□□□ 0.35
HCFC1-201ENST00000310441 DPH6Q7L8W6 267 aa17.25■□□□□ 0.35
HCFC1-201ENST00000310441 IFNL2Q8IZJ0 200 aa17.25■□□□□ 0.35
HCFC1-201ENST00000310441 DAPK3O43293 454 aa17.24■□□□□ 0.35
HCFC1-201ENST00000310441 SDCCAG3Q96C92 435 aa17.24■□□□□ 0.35
HCFC1-201ENST00000310441 DHX58Q96C10 678 aa17.24■□□□□ 0.35
HCFC1-201ENST00000310441 DNAJC25Q9H1X3 360 aa17.24■□□□□ 0.35
HCFC1-201ENST00000310441 MAGEB6P1A0A0J9YX57 407 aa17.24■□□□□ 0.35
HCFC1-201ENST00000310441 HAUS1Q96CS2 278 aa17.24■□□□□ 0.35
HCFC1-201ENST00000310441 PAG1Q9NWQ8 432 aa17.24■□□□□ 0.35
HCFC1-201ENST00000310441 PFDN6O15212 129 aa17.24■□□□□ 0.35
HCFC1-201ENST00000310441 WDR46O15213 610 aaKnown RBP17.24■□□□□ 0.35
HCFC1-201ENST00000310441 CYP7A1P22680 504 aa17.24■□□□□ 0.35
HCFC1-201ENST00000310441 PLCB4Q15147 1175 aa17.24■□□□□ 0.35
HCFC1-201ENST00000310441 BRF1Q92994 677 aa17.23■□□□□ 0.35
HCFC1-201ENST00000310441 MAGI1Q96QZ7 1491 aaPredicted RBP17.23■□□□□ 0.35
HCFC1-201ENST00000310441 MARCKSP29966 332 aaPredicted RBP17.23■□□□□ 0.35
HCFC1-201ENST00000310441 YWHAEP62258 255 aaKnown RBP17.23■□□□□ 0.35
HCFC1-201ENST00000310441 PLS1Q14651 629 aa17.23■□□□□ 0.35
HCFC1-201ENST00000310441 ATP2B3Q16720 1220 aa17.23■□□□□ 0.35
HCFC1-201ENST00000310441 SLC9C1Q4G0N8 1177 aa17.23■□□□□ 0.35
HCFC1-201ENST00000310441 LLPHQ9BRT6 129 aaKnown RBP17.23■□□□□ 0.35
HCFC1-201ENST00000310441 LARSQ9P2J5 1176 aaKnown RBP17.23■□□□□ 0.35
HCFC1-201ENST00000310441 SYNRGQ9UMZ2 1314 aa17.23■□□□□ 0.35
HCFC1-201ENST00000310441 ARHGAP4P98171 946 aa17.23■□□□□ 0.35
HCFC1-201ENST00000310441 GABPAQ06546 454 aa17.23■□□□□ 0.35
HCFC1-201ENST00000310441 P4HA1P13674 534 aa17.23■□□□□ 0.35
HCFC1-201ENST00000310441 HHATQ5VTY9 493 aa17.23■□□□□ 0.35
HCFC1-201ENST00000310441 ESYT1Q9BSJ8 1104 aa17.23■□□□□ 0.35
HCFC1-201ENST00000310441 RIOK3O14730 519 aaKnown RBP17.23■□□□□ 0.35
HCFC1-201ENST00000310441 MCM7P33993 719 aa17.23■□□□□ 0.35
HCFC1-201ENST00000310441 TEKT1Q969V4 418 aa17.23■□□□□ 0.35
HCFC1-201ENST00000310441 SETDB2Q96T68 719 aa17.23■□□□□ 0.35
HCFC1-201ENST00000310441 MYO10Q9HD67 2058 aa17.22■□□□□ 0.35
HCFC1-201ENST00000310441 THOC2Q8NI27 1593 aaKnown RBP17.22■□□□□ 0.35
HCFC1-201ENST00000310441 SLC12A2P55011 1212 aa17.22■□□□□ 0.35
HCFC1-201ENST00000310441 EVCP57679 992 aa17.22■□□□□ 0.35
HCFC1-201ENST00000310441 MIER3Q7Z3K6 550 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms